Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold32G13005 Striga asiatica HOM05D000174 ORTHO05D000630 2.2e-61 239.6 208 100.0
SGA_v2.0_scaffold225G43029 Striga asiatica HOM05D000174 ORTHO05D000630 3.9e-26 122.5 140 67.9
MSTRG.16684 Avicennia marina HOM05D000174 ORTHO05D000630 5.1e-18 95.5 134 56.7
MSTRG.20216 Avicennia marina HOM05D000174 ORTHO05D000630 2.4e-15 86.7 141 39.0
Migut.B00436 Erythranthe guttata HOM05D000174 ORTHO05D000630 9.9e-14 81.3 140 39.3
Oeu037275.1 Olea europaea HOM05D000174 ORTHO05D000630 2.4e-12 76.6 155 40.0
BcaB06g26027 Brassica carinata HOM05D000174 ORTHO05D000630 1.3e-10 70.9 88 48.9
MSTRG.27759 Avicennia marina HOM05D000174 ORTHO05D000630 2.3e-10 70.1 136 36.8
BcaB04g19050 Brassica carinata HOM05D000174 ORTHO05D000630 5.1e-10 68.9 83 44.6
Carub.0003s1942 Capsella rubella HOM05D000174 ORTHO05D000630 1.1e-09 67.8 88 45.5
Nitab4.5_0001445g0010 Nicotiana tabacum HOM05D000174 ORTHO05D000630 4.3e-09 65.9 125 44.8
Oeu010472.1 Olea europaea HOM05D000174 ORTHO05D000630 4.3e-09 65.9 139 35.3
Sp3g17620 Schrenkiella parvula HOM05D000174 ORTHO05D000630 7.4e-09 65.1 88 46.6
Oeu010471.1 Olea europaea HOM05D000174 ORTHO05D000630 1.3e-08 64.3 130 33.1
AL3G33010 Arabidopsis lyrata HOM05D000174 ORTHO05D000630 1.6e-08 63.9 86 44.2
BcaC05g28445 Brassica carinata HOM05D000174 ORTHO05D000630 1.6e-08 63.9 87 44.8
A05p30030 Brassica napus HOM05D000174 ORTHO05D000630 1.6e-08 63.9 87 44.8
C05p45300 Brassica napus HOM05D000174 ORTHO05D000630 1.6e-08 63.9 87 44.8
BolC5t33253H Brassica oleracea HOM05D000174 ORTHO05D000630 1.6e-08 63.9 87 44.8
PGSC0003DMG400034322 Solanum tuberosum HOM05D000174 ORTHO05D000630 1.6e-08 63.9 137 35.0
unitig_0.g634 Utricularia gibba HOM05D000174 ORTHO05D000630 1.6e-08 63.9 127 50.4
Oeu010468.1 Olea europaea HOM05D000174 ORTHO05D000630 2.1e-08 63.5 130 33.1
Oeu021366.1 Olea europaea HOM05D000174 ORTHO05D000630 2.1e-08 63.5 155 35.5
C03p50440 Brassica napus HOM05D000174 ORTHO05D000630 2.8e-08 63.2 85 43.5
BolC3t17336H Brassica oleracea HOM05D000174 ORTHO05D000630 2.8e-08 63.2 85 43.5
BraA03t13284Z Brassica rapa HOM05D000174 ORTHO05D000630 2.8e-08 63.2 85 43.5
Rhsim07G0221000 Rhododendron simsii HOM05D000174 ORTHO05D000630 3.7e-08 62.8 130 36.9
Aa31LG8G6330 Aethionema arabicum HOM05D000174 ORTHO05D000630 4.8e-08 62.4 146 43.2
BcaB04g20693 Brassica carinata HOM05D000174 ORTHO05D000630 4.8e-08 62.4 85 42.4
A01p35100 Brassica napus HOM05D000174 ORTHO05D000630 4.8e-08 62.4 119 36.1
BraA01t03592Z Brassica rapa HOM05D000174 ORTHO05D000630 4.8e-08 62.4 119 36.1
Migut.B00437 Erythranthe guttata HOM05D000174 ORTHO05D000630 4.8e-08 62.4 120 50.8
Lj5P218T69 Lonicera japonica HOM05D000174 ORTHO05D000630 4.8e-08 62.4 140 35.7
Oeu010424.1 Olea europaea HOM05D000174 ORTHO05D000630 4.8e-08 62.4 79 70.9
Oeu010427.1 Olea europaea HOM05D000174 ORTHO05D000630 4.8e-08 62.4 77 67.5
Oeu010432.1 Olea europaea HOM05D000174 ORTHO05D000630 4.8e-08 62.4 77 67.5
Peaxi162Scf00003g00267 Petunia axillaris HOM05D000174 ORTHO05D000630 4.8e-08 62.4 143 32.9
AL1G57440 Arabidopsis lyrata HOM05D000174 ORTHO05D021405 6.2e-08 62.0 142 47.2
BcaNung06934 Brassica carinata HOM05D000174 ORTHO05D000630 6.2e-08 62.0 119 36.1
C01p44530 Brassica napus HOM05D000174 ORTHO05D000630 6.2e-08 62.0 119 36.1
BolC1t04419H Brassica oleracea HOM05D000174 ORTHO05D000630 6.2e-08 62.0 119 36.1
BraA05t21845Z Brassica rapa HOM05D000174 ORTHO05D000630 6.2e-08 62.0 87 43.7
BcaC01g03619 Brassica carinata HOM05D000174 ORTHO05D000630 8.1e-08 61.6 85 42.4
unitig_21.g20721 Utricularia gibba HOM05D000174 ORTHO05D000630 8.1e-08 61.6 130 49.2
Actinidia27987 Actinidia chinensis HOM05D000174 ORTHO05D000630 1.1e-07 61.2 130 50.8
A03p41300 Brassica napus HOM05D000174 ORTHO05D000630 1.1e-07 61.2 85 42.4
C06p04670 Brassica napus HOM05D000174 ORTHO05D000630 1.1e-07 61.2 82 43.9
Oeu010433.1 Olea europaea HOM05D000174 ORTHO05D000630 1.1e-07 61.2 78 67.9
Oeu010436.1 Olea europaea HOM05D000174 ORTHO05D000630 1.1e-07 61.2 78 67.9
Actinidia34366 Actinidia chinensis HOM05D000174 ORTHO05D000630 1.4e-07 60.8 132 35.6
BcaC08g43167 Brassica carinata HOM05D000174 ORTHO05D000630 1.4e-07 60.8 82 43.9
BolC6t35597H Brassica oleracea HOM05D000174 ORTHO05D000630 1.4e-07 60.8 82 43.9
Sp1g36780 Schrenkiella parvula HOM05D000174 ORTHO05D050827 1.4e-07 60.8 83 43.4
Lsat_1_v5_gn_1_24181 Lactuca sativa HOM05D000174 ORTHO05D000630 1.8e-07 60.5 136 36.0
Oeu013788.1 Olea europaea HOM05D000174 ORTHO05D000630 1.8e-07 60.5 88 42.0
AL1G57450 Arabidopsis lyrata HOM05D000174 ORTHO05D021405 2.4e-07 60.1 80 45.0
SGA_v2.0_scaffold219G42526 Striga asiatica HOM05D000174 ORTHO05D000630 2.4e-07 60.1 130 33.1
unitig_60.g25462 Utricularia gibba HOM05D000174 ORTHO05D000630 2.4e-07 60.1 133 51.9
AT3G19580 Arabidopsis thaliana HOM05D000174 ORTHO05D000630 3.1e-07 59.7 88 42.0
CARHR095030 Cardamine hirsuta HOM05D000174 ORTHO05D000630 3.1e-07 59.7 93 40.9
Thhalv10021307m.g Eutrema salsugineum HOM05D000174 ORTHO05D000630 3.1e-07 59.7 91 41.8
HanXRQChr16g0509251 Helianthus annuus HOM05D000174 ORTHO05D000630 3.1e-07 59.7 115 34.8
THA.LOC104815227 Tarenaya hassleriana HOM05D000174 ORTHO05D000630 3.1e-07 59.7 50 60.0
Zm00001eb030190 Zea mays HOM05D000174 ORTHO05D000630 3.1e-07 59.7 31 87.1
A06p03490 Brassica napus HOM05D000174 ORTHO05D000630 4.0e-07 59.3 82 42.7
BraA06t23557Z Brassica rapa HOM05D000174 ORTHO05D000630 4.0e-07 59.3 82 42.7
ECA247G0119 Erigeron canadensis HOM05D000174 ORTHO05D000630 5.3e-07 58.9 144 36.1
Oeu010465.1 Olea europaea HOM05D000174 ORTHO05D000630 5.3e-07 58.9 80 41.2
CsaV3_2G026210 Cucumis sativus L. HOM05D000174 ORTHO05D000630 6.9e-07 58.5 136 33.1
Nitab4.5_0000569g0020 Nicotiana tabacum HOM05D000174 ORTHO05D000630 6.9e-07 58.5 138 33.3
Gohir.A02G081300 Gossypium hirsutum HOM05D000174 ORTHO05D000630 9.0e-07 58.2 135 36.3
Peaxi162Scf00016g00288 Petunia axillaris HOM05D000174 ORTHO05D000630 9.0e-07 58.2 148 41.2
Hma1.2p1_1023F.1_g248850 Hydrangea macrophylla HOM05D000174 ORTHO05D000630 1.2e-06 57.8 225 37.8
Hma1.2p1_1773F.1_g301705 Hydrangea macrophylla HOM05D000174 ORTHO05D000630 1.2e-06 57.8 225 37.8
Actinidia00380 Actinidia chinensis HOM05D000174 ORTHO05D000630 1.5e-06 57.4 79 41.8
Carub.0001s3911 Capsella rubella HOM05D000174 ORTHO05D021405 1.5e-06 57.4 77 68.8
CARHR039970 Cardamine hirsuta HOM05D000174 ORTHO05D021405 1.5e-06 57.4 84 42.9
HanXRQChr10g0281541 Helianthus annuus HOM05D000174 ORTHO05D000630 1.5e-06 57.4 137 34.3
Hma1.2p1_1174F.1_g263760 Hydrangea macrophylla HOM05D000174 ORTHO05D000630 1.5e-06 57.4 163 31.9
Hma1.2p1_3101F.1_g332705 Hydrangea macrophylla HOM05D000174 ORTHO05D000630 1.5e-06 57.4 163 31.9
THA.LOC104826493 Tarenaya hassleriana HOM05D000174 ORTHO05D000630 1.5e-06 57.4 145 37.9
Oeu010430.1 Olea europaea HOM05D000174 ORTHO05D000630 2.0e-06 57.0 109 34.9
VMungo0720G1076 Vigna mungo HOM05D000174 ORTHO05D000630 2.0e-06 57.0 115 36.5
BcaB07g33441 Brassica carinata HOM05D000174 ORTHO05D000630 2.6e-06 56.6 82 40.2
BcaB07g33442 Brassica carinata HOM05D000174 ORTHO05D000630 2.6e-06 56.6 82 40.2
CANSAT25G1422 Cannabis sativa HOM05D000174 ORTHO05D000630 2.6e-06 56.6 48 62.5
ClCG08G016400 Citrullus lanatus HOM05D000174 ORTHO05D000630 2.6e-06 56.6 136 33.1
DCAR_021958 Daucus carota HOM05D000174 ORTHO05D000630 2.6e-06 56.6 134 36.6
Duzib041G0581 Durio zibethinus HOM05D000174 ORTHO05D000630 2.6e-06 56.6 141 35.5
TAR381G1385 Trochodendron aralioides HOM05D000174 ORTHO05D000630 2.6e-06 56.6 142 33.1
MELO3C010813.2 Cucumis melo HOM05D000174 ORTHO05D000630 3.4e-06 56.2 134 47.0
ECA240G1403 Erigeron canadensis HOM05D000174 ORTHO05D000630 3.4e-06 56.2 123 32.5
Gohir.A13G046200 Gossypium hirsutum HOM05D000174 ORTHO05D000630 3.4e-06 56.2 89 41.6
Gohir.D13G045300 Gossypium hirsutum HOM05D000174 ORTHO05D000630 3.4e-06 56.2 89 41.6
Gorai.013G050100 Gossypium raimondii HOM05D000174 ORTHO05D000630 3.4e-06 56.2 89 41.6
Sc18g0003510 Simmondsia chinensis HOM05D000174 ORTHO05D000630 3.4e-06 56.2 121 47.9
HPP92_012492 Vanilla planifolia HOM05D000174 ORTHO05D000630 3.4e-06 56.2 117 51.3
ECA236G3102 Erigeron canadensis HOM05D000174 ORTHO05D000630 4.5e-06 55.8 83 39.8
Lj5g0014042 Lotus japonicus HOM05D000174 ORTHO05D000630 5.8e-06 55.5 38 71.1
Sc18g0003560 Simmondsia chinensis HOM05D000174 ORTHO05D000630 5.8e-06 55.5 121 47.9
vmacro22062 Vaccinium macrocarpon HOM05D000174 ORTHO05D000630 5.8e-06 55.5 131 38.9
Actinidia10189 Actinidia chinensis HOM05D000174 ORTHO05D000630 9.9e-06 54.7 128 50.0
AT1G49900 Arabidopsis thaliana HOM05D000174 ORTHO05D021405 9.9e-06 54.7 78 65.4
DCAR_001685 Daucus carota HOM05D000174 ORTHO05D000630 9.9e-06 54.7 83 43.4
TAR625G1539 Trochodendron aralioides HOM05D000174 ORTHO05D000630 9.9e-06 54.7 143 31.5


User provided reference genes

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