Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold327G48779 Striga asiatica HOM05D000086 ORTHO05D008850 1.1e-59 233.0 112 100.0
SGA_v2.0_scaffold58G20587 Striga asiatica HOM05D000086 ORTHO05D008850 8.8e-25 117.1 67 83.6
Migut.B00283 Erythranthe guttata HOM05D000086 ORTHO05D008850 4.0e-17 91.7 67 64.2
PGSC0003DMG400025175 Solanum tuberosum HOM05D000086 ORTHO05D008850 1.5e-16 89.7 67 62.7
Solyc01g109200.4 Solanum lycopersicum HOM05D000086 ORTHO05D008850 2.6e-16 89.0 67 62.7
Sopen01g051390 Solanum pennellii HOM05D000086 ORTHO05D008850 2.6e-16 89.0 67 62.7
Nitab4.5_0003281g0010 Nicotiana tabacum HOM05D000086 ORTHO05D008850 3.3e-16 88.6 67 62.7
Nitab4.5_0003816g0030 Nicotiana tabacum HOM05D000086 ORTHO05D008850 3.3e-16 88.6 67 62.7
CANSAT21G1787 Cannabis sativa HOM05D000086 ORTHO05D008850 5.7e-16 87.8 69 56.5
Oeu010564.1 Olea europaea HOM05D000086 ORTHO05D008850 5.7e-16 87.8 68 63.2
Dinv23571 Davidia involucrata HOM05D000086 ORTHO05D008850 2.8e-15 85.5 67 61.2
MSTRG.20116 Avicennia marina HOM05D000086 ORTHO05D008850 3.7e-15 85.1 67 59.7
FAN15G3295 Fragaria x ananassa HOM05D000086 ORTHO05D008850 6.3e-15 84.3 68 58.8
CSS0017550 Camellia sinensis var. sinensis HOM05D000086 ORTHO05D008850 8.2e-15 84.0 69 59.4
FvH4_2g07470 Fragaria vesca HOM05D000086 ORTHO05D008850 1.1e-14 83.6 68 58.8
FAN20G3002 Fragaria x ananassa HOM05D000086 ORTHO05D008850 1.1e-14 83.6 68 58.8
Actinidia00484 Actinidia chinensis HOM05D000086 ORTHO05D008850 1.4e-14 83.2 69 58.0
unitig_21.g20768 Utricularia gibba HOM05D000086 ORTHO05D008850 1.4e-14 83.2 67 56.7
TWI79G0178 Tripterygium wilfordii HOM05D000086 ORTHO05D008850 1.8e-14 82.8 71 54.9
Sabra04G0099100 Salix brachista HOM05D000086 ORTHO05D008850 2.4e-14 82.4 69 58.0
FAN24G2519 Fragaria x ananassa HOM05D000086 ORTHO05D008850 3.1e-14 82.0 68 57.4
FAN27G2679 Fragaria x ananassa HOM05D000086 ORTHO05D008850 3.1e-14 82.0 68 57.4
FAN15G0266 Fragaria x ananassa HOM05D000086 ORTHO05D008850 4.1e-14 81.6 68 57.4
FAN26G1015 Fragaria x ananassa HOM05D000086 ORTHO05D008850 4.1e-14 81.6 68 57.4
Cc02_g18090 Coffea canephora HOM05D000086 ORTHO05D008850 9.1e-14 80.5 62 59.7
CSS0026802 Camellia sinensis var. sinensis HOM05D000086 ORTHO05D008850 1.2e-13 80.1 69 55.1
Hma1.2p1_0584F.1_g183330 Hydrangea macrophylla HOM05D000086 ORTHO05D008850 2.0e-13 79.3 69 56.5
ClCG09G017770 Citrullus lanatus HOM05D000086 ORTHO05D008850 3.5e-13 78.6 69 58.0
MELO3C021942.2 Cucumis melo HOM05D000086 ORTHO05D008850 4.5e-13 78.2 70 58.6
CsaV3_2G014360 Cucumis sativus L. HOM05D000086 ORTHO05D008850 4.5e-13 78.2 70 58.6
Potri.009G110000 Populus trichocarpa HOM05D000086 ORTHO05D008850 1.0e-12 77.0 69 55.1
Prupe.8G108300 Prunus persica HOM05D000086 ORTHO05D008850 2.9e-12 75.5 75 54.7
Dinv42102 Davidia involucrata HOM05D000086 ORTHO05D008850 3.8e-12 75.1 67 52.2
Cfa004962 Carpinus fangiana HOM05D000086 ORTHO05D008850 1.1e-11 73.6 69 55.1
Haze_02439 Corylus avellana HOM05D000086 ORTHO05D008850 1.1e-11 73.6 69 55.1
Manes.15G146300 Manihot esculenta HOM05D000086 ORTHO05D008850 1.1e-11 73.6 70 52.9
Ciclev10029919m.g Citrus clementina HOM05D000086 ORTHO05D008850 1.5e-11 73.2 78 51.3
Rhsim11G0171800 Rhododendron simsii HOM05D000086 ORTHO05D008850 1.5e-11 73.2 69 53.6
Sc18g0004740 Simmondsia chinensis HOM05D000086 ORTHO05D008850 1.5e-11 73.2 84 48.8
Atru.chr5.2907 Acer truncatum HOM05D000086 ORTHO05D008850 1.9e-11 72.8 77 53.2
CiPaw.06G138700 Carya illinoinensis HOM05D000086 ORTHO05D008850 1.9e-11 72.8 69 52.2
DCAR_029004 Daucus carota HOM05D000086 ORTHO05D008850 4.2e-11 71.6 68 48.5
MD10G1085100 Malus domestica HOM05D000086 ORTHO05D008850 4.2e-11 71.6 70 51.4
PSO170G0004 Papaver somniferum HOM05D000086 ORTHO05D008850 4.2e-11 71.6 72 54.2
PSO700G0134 Papaver somniferum HOM05D000086 ORTHO05D008850 5.5e-11 71.2 72 54.2
Glyma.11G122400 Glycine max HOM05D000086 ORTHO05D008850 7.2e-11 70.9 71 53.5
Lsat_1_v5_gn_7_88601 Lactuca sativa HOM05D000086 ORTHO05D008850 7.2e-11 70.9 71 50.7
QL11p039592 Quercus lobata HOM05D000086 ORTHO05D008850 9.4e-11 70.5 70 55.7
Phvul.011G049300 Phaseolus vulgaris HOM05D000086 ORTHO05D008850 1.2e-10 70.1 71 52.1
VMungo1127G1469 Vigna mungo HOM05D000086 ORTHO05D008850 1.2e-10 70.1 71 52.1
Glyma.12G047300 Glycine max HOM05D000086 ORTHO05D008850 1.6e-10 69.7 71 52.1
CDE07G1224 Ceratophyllum demersum HOM05D000086 ORTHO05D008850 2.7e-10 68.9 74 50.0
Duzib052G1244 Durio zibethinus HOM05D000086 ORTHO05D008850 3.6e-10 68.6 67 52.2
FAN18G0546 Fragaria x ananassa HOM05D000086 ORTHO05D008850 4.7e-10 68.2 60 56.7
HanXRQChr16g0504901 Helianthus annuus HOM05D000086 ORTHO05D008850 4.7e-10 68.2 69 47.8
TAR628G0842 Trochodendron aralioides HOM05D000086 ORTHO05D008850 4.7e-10 68.2 72 47.2
TAR628G1553 Trochodendron aralioides HOM05D000086 ORTHO05D008850 4.7e-10 68.2 72 47.2
Lalb_Chr01g0002901 Lupinus albus HOM05D000086 ORTHO05D008850 6.1e-10 67.8 68 48.5
Sed0000443 Sechium edule HOM05D000086 ORTHO05D008850 6.1e-10 67.8 69 56.5
Thecc.02G029800 Theobroma cacao HOM05D000086 ORTHO05D008850 6.1e-10 67.8 67 52.2
Gohir.A01G181400 Gossypium hirsutum HOM05D000086 ORTHO05D008850 1.0e-09 67.0 67 52.2
Gorai.002G214100 Gossypium raimondii HOM05D000086 ORTHO05D008850 1.0e-09 67.0 67 52.2
arahy.Tifrunner.gnm1.ann1.CN40UY Arachis hypogaea HOM05D000086 ORTHO05D008850 1.8e-09 66.2 79 45.6
arahy.Tifrunner.gnm1.ann1.IR3FU7 Arachis hypogaea HOM05D000086 ORTHO05D008850 1.8e-09 66.2 79 45.6
EL10Ac9g21779 Beta vulgaris HOM05D000086 ORTHO05D008850 2.3e-09 65.9 66 47.0
Duzib132G0561 Durio zibethinus HOM05D000086 ORTHO05D008850 2.3e-09 65.9 67 50.7
Lj3g0019268 Lotus japonicus HOM05D000086 ORTHO05D008850 5.2e-09 64.7 68 50.0
Duzib248G0960 Durio zibethinus HOM05D000086 ORTHO05D008850 6.8e-09 64.3 66 50.0
PGR042G3812 Punica granatum HOM05D000086 ORTHO05D008850 6.8e-09 64.3 52 57.7
AUR62011386 Chenopodium quinoa HOM05D000086 ORTHO05D008850 8.8e-09 63.9 66 47.0
AUR62016674 Chenopodium quinoa HOM05D000086 ORTHO05D008850 8.8e-09 63.9 66 47.0
Ah.01g019760 Amaranthus hybridus HOM05D000086 ORTHO05D008850 2.6e-08 62.4 62 50.0
ECA236G2444 Erigeron canadensis HOM05D000086 ORTHO05D008850 4.4e-08 61.6 68 44.1
Aa31LG8G5770 Aethionema arabicum HOM05D000086 ORTHO05D008850 7.5e-08 60.8 85 42.4
A05p30650 Brassica napus HOM05D000086 ORTHO05D008850 1.7e-07 59.7 78 42.3
C03p49900 Brassica napus HOM05D000086 ORTHO05D008850 1.7e-07 59.7 67 47.8
BraA05t21907Z Brassica rapa HOM05D000086 ORTHO05D008850 1.7e-07 59.7 78 42.3
CARHR094350 Cardamine hirsuta HOM05D000086 ORTHO05D008850 1.7e-07 59.7 77 41.6
Medtr3g091620 Medicago truncatula HOM05D000086 ORTHO05D008850 1.7e-07 59.7 78 46.2
BcaC01g03667 Brassica carinata HOM05D000086 ORTHO05D008850 2.8e-07 58.9 68 48.5
BolC3t17284H Brassica oleracea HOM05D000086 ORTHO05D008850 2.8e-07 58.9 68 48.5
AL3G32320 Arabidopsis lyrata HOM05D000086 ORTHO05D008850 3.7e-07 58.5 75 41.3
AT3G18930 Arabidopsis thaliana HOM05D000086 ORTHO05D008850 3.7e-07 58.5 75 41.3
BcaB04g19012 Brassica carinata HOM05D000086 ORTHO05D008850 3.7e-07 58.5 71 45.1
BcaB06g25944 Brassica carinata HOM05D000086 ORTHO05D008850 3.7e-07 58.5 79 41.8
C05p46530 Brassica napus HOM05D000086 ORTHO05D008850 3.7e-07 58.5 79 41.8
BolC5t33382H Brassica oleracea HOM05D000086 ORTHO05D008850 3.7e-07 58.5 79 41.8
Carub.0003s1875 Capsella rubella HOM05D000086 ORTHO05D008850 3.7e-07 58.5 75 41.3
Ca_16713_v3 Cicer arietinum L. HOM05D000086 ORTHO05D008850 3.7e-07 58.5 78 47.4
Psat5g076520 Pisum sativum HOM05D000086 ORTHO05D008850 4.8e-07 58.2 68 45.6
Sp3g17020 Schrenkiella parvula HOM05D000086 ORTHO05D008850 4.8e-07 58.2 81 39.5
TPR.G19369 Trifolium pratense HOM05D000086 ORTHO05D008850 4.8e-07 58.2 69 47.8
Thhalv10020783m.g Eutrema salsugineum HOM05D000086 ORTHO05D008850 6.3e-07 57.8 82 39.0
MBI16_g13168_MAGBIO Magnolia biondii HOM05D000086 ORTHO05D008850 1.1e-06 57.0 70 44.3
THA.LOC104808448 Tarenaya hassleriana HOM05D000086 ORTHO05D008850 1.1e-06 57.0 74 43.2
BcaB06g25945 Brassica carinata HOM05D000086 ORTHO05D008850 1.8e-06 56.2 80 38.8


User provided reference genes

Program Settings