Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold31G12627 Striga asiatica HOM05D005899 ORTHO05D007445 5.3e-83 310.8 144 100.0
SGA_v2.0_scaffold517G52669 Striga asiatica HOM05D005899 ORTHO05D007445 2.1e-55 219.2 137 71.5
Oeu064565.1 Olea europaea HOM05D005899 ORTHO05D007445 3.0e-54 215.3 133 72.9
Migut.N00303 Erythranthe guttata HOM05D005899 ORTHO05D007445 8.3e-52 207.2 131 70.2
Cc02_g31760 Coffea canephora HOM05D005899 ORTHO05D007445 3.6e-47 191.8 133 63.9
Dinv11553 Davidia involucrata HOM05D005899 ORTHO05D007445 4.7e-47 191.4 135 65.2
PGSC0003DMG400022509 Solanum tuberosum HOM05D005899 ORTHO05D007445 4.0e-46 188.3 128 67.2
TAR362G0589 Trochodendron aralioides HOM05D005899 ORTHO05D007445 5.2e-46 188.0 127 66.1
Sopen01g041400 Solanum pennellii HOM05D005899 ORTHO05D007445 8.9e-46 187.2 128 68.0
Oeu044665.1 Olea europaea HOM05D005899 ORTHO05D007445 1.2e-45 186.8 134 62.7
Solyc01g097800.3 Solanum lycopersicum HOM05D005899 ORTHO05D007445 3.4e-45 185.3 128 66.4
Actinidia05763 Actinidia chinensis HOM05D005899 ORTHO05D007445 7.5e-45 184.1 137 59.9
CAN.G134.162 Capsicum annuum HOM05D005899 ORTHO05D007445 9.8e-45 183.7 127 66.1
Dinv12477 Davidia involucrata HOM05D005899 ORTHO05D007445 1.3e-44 183.3 129 64.3
CSS0047717 Camellia sinensis var. sinensis HOM05D005899 ORTHO05D007445 2.2e-44 182.6 127 65.4
vmacro14199 Vaccinium macrocarpon HOM05D005899 ORTHO05D007445 2.9e-44 182.2 134 63.4
Ah.04g162380 Amaranthus hybridus HOM05D005899 ORTHO05D007445 6.4e-44 181.0 127 62.2
Cfa006459 Carpinus fangiana HOM05D005899 ORTHO05D007445 1.4e-43 179.9 128 61.7
FAN05G2237 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.4e-43 179.9 136 59.6
Rhsim07G0131800 Rhododendron simsii HOM05D005899 ORTHO05D007445 1.4e-43 179.9 127 64.6
DCAR_006615 Daucus carota HOM05D005899 ORTHO05D007445 1.9e-43 179.5 127 63.0
FvH4_6g03430 Fragaria vesca HOM05D005899 ORTHO05D007445 1.9e-43 179.5 130 61.5
FAN14G1139 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.9e-43 179.5 130 61.5
Os01g0542000 Oryza sativa ssp. japonica HOM05D005899 ORTHO05D007445 1.9e-43 179.5 141 58.9
THA.LOC104802822 Tarenaya hassleriana HOM05D005899 ORTHO05D007445 1.9e-43 179.5 126 62.7
Zm00001eb162780 Zea mays HOM05D005899 ORTHO05D007445 2.4e-43 179.1 135 61.5
BcaB03g11648 Brassica carinata HOM05D005899 ORTHO05D007445 3.2e-43 178.7 127 63.0
BraA05t22981Z Brassica rapa HOM05D005899 ORTHO05D007445 3.2e-43 178.7 127 63.8
CiPaw.07G006200 Carya illinoinensis HOM05D005899 ORTHO05D007445 3.2e-43 178.7 127 63.0
Lj7P487T33 Lonicera japonica HOM05D005899 ORTHO05D007445 3.2e-43 178.7 132 61.4
Nitab4.5_0002361g0040 Nicotiana tabacum HOM05D005899 ORTHO05D007445 3.2e-43 178.7 130 62.3
Nitab4.5_0013433g0050 Nicotiana tabacum HOM05D005899 ORTHO05D007445 4.1e-43 178.3 130 62.3
TPR.G8897 Trifolium pratense HOM05D005899 ORTHO05D007445 4.1e-43 178.3 129 65.9
C05p62440 Brassica napus HOM05D005899 ORTHO05D007445 5.4e-43 177.9 127 63.8
Ciclev10001942m.g Citrus clementina HOM05D005899 ORTHO05D007445 7.0e-43 177.6 127 61.4
VMungo0540G1799 Vigna mungo HOM05D005899 ORTHO05D007445 7.0e-43 177.6 127 63.0
AL3G15170 Arabidopsis lyrata HOM05D005899 ORTHO05D007445 9.2e-43 177.2 127 63.0
A05p42720 Brassica napus HOM05D005899 ORTHO05D007445 9.2e-43 177.2 127 63.0
BolC5t34897H Brassica oleracea HOM05D005899 ORTHO05D007445 1.6e-42 176.4 127 63.0
ATR0681G168 Amborella trichopoda HOM05D005899 ORTHO05D007445 2.1e-42 176.0 124 62.9
arahy.Tifrunner.gnm1.ann1.41KAT0 Arachis hypogaea HOM05D005899 ORTHO05D007445 2.1e-42 176.0 131 60.3
Ciclev10001941m.g Citrus clementina HOM05D005899 ORTHO05D007445 2.1e-42 176.0 127 60.6
Lj1g0012490 Lotus japonicus HOM05D005899 ORTHO05D007445 2.1e-42 176.0 133 60.9
QL03p024530 Quercus lobata HOM05D005899 ORTHO05D007445 2.1e-42 176.0 127 59.8
Sp3g03700 Schrenkiella parvula HOM05D005899 ORTHO05D007445 2.1e-42 176.0 127 63.0
AT3G04880 Arabidopsis thaliana HOM05D005899 ORTHO05D007445 2.7e-42 175.6 127 63.0
Carub.0003s0407 Capsella rubella HOM05D005899 ORTHO05D007445 2.7e-42 175.6 127 63.0
Duzib177G0382 Durio zibethinus HOM05D005899 ORTHO05D007445 3.5e-42 175.3 127 61.4
QL03p024564 Quercus lobata HOM05D005899 ORTHO05D007445 3.5e-42 175.3 136 55.9
Psat0s62g0080 Pisum sativum HOM05D005899 ORTHO05D007445 4.6e-42 174.9 131 60.3
CARHR079150 Cardamine hirsuta HOM05D005899 ORTHO05D007445 7.8e-42 174.1 128 60.9
PGR083G2155 Punica granatum HOM05D005899 ORTHO05D007445 7.8e-42 174.1 125 61.6
Glyma.19G243000 Glycine max HOM05D005899 ORTHO05D007445 1.0e-41 173.7 131 60.3
Lsat_1_v5_gn_6_53000 Lactuca sativa HOM05D005899 ORTHO05D007445 1.0e-41 173.7 127 62.2
Lalb_Chr15g0076871 Lupinus albus HOM05D005899 ORTHO05D007445 1.0e-41 173.7 127 61.4
Aa31LG5G15270 Aethionema arabicum HOM05D005899 ORTHO05D007445 1.3e-41 173.3 125 61.6
Duzib128G1862 Durio zibethinus HOM05D005899 ORTHO05D007445 1.3e-41 173.3 127 60.6
Sed0018425 Sechium edule HOM05D005899 ORTHO05D007445 1.3e-41 173.3 127 60.6
Thecc.05G288500 Theobroma cacao HOM05D005899 ORTHO05D007445 1.3e-41 173.3 127 60.6
TPR.G6971 Trifolium pratense HOM05D005899 ORTHO05D007445 1.3e-41 173.3 131 60.3
EL10Ac4g09173 Beta vulgaris HOM05D005899 ORTHO05D007445 1.7e-41 172.9 127 60.6
CDE05G2514 Ceratophyllum demersum HOM05D005899 ORTHO05D007445 1.7e-41 172.9 132 57.6
MBI01_g13083_MAGBIO Magnolia biondii HOM05D005899 ORTHO05D007445 1.7e-41 172.9 134 57.5
Phvul.006G099800 Phaseolus vulgaris HOM05D005899 ORTHO05D007445 2.3e-41 172.6 127 61.4
Gohir.D11G264900 Gossypium hirsutum HOM05D005899 ORTHO05D007445 3.0e-41 172.2 127 59.1
Gorai.007G285000 Gossypium raimondii HOM05D005899 ORTHO05D007445 3.0e-41 172.2 127 59.1
Manes.09G155900 Manihot esculenta HOM05D005899 ORTHO05D007445 5.0e-41 171.4 128 59.4
Medtr7g114750 Medicago truncatula HOM05D005899 ORTHO05D007445 6.6e-41 171.0 127 60.6
RcHm_v2.0_Chr3g0451931 Rosa chinensis HOM05D005899 ORTHO05D007445 6.6e-41 171.0 125 60.0
Ca_09408_v3 Cicer arietinum L. HOM05D005899 ORTHO05D007445 8.6e-41 170.6 131 60.3
FAN02G1821 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.1e-40 170.2 124 60.5
Prupe.6G339900 Prunus persica HOM05D005899 ORTHO05D007445 1.1e-40 170.2 136 55.9
AUR62000983 Chenopodium quinoa HOM05D005899 ORTHO05D007445 1.5e-40 169.9 127 59.8
Gohir.A11G255200 Gossypium hirsutum HOM05D005899 ORTHO05D007445 1.5e-40 169.9 127 58.3
Sc13g0006240 Simmondsia chinensis HOM05D005899 ORTHO05D007445 1.5e-40 169.9 133 57.1
Eucgr.L01763 Eucalyptus grandis HOM05D005899 ORTHO05D007445 1.9e-40 169.5 132 56.8
PSO761G0524 Papaver somniferum HOM05D005899 ORTHO05D007445 1.9e-40 169.5 128 59.4
CANSAT54G2589 Cannabis sativa HOM05D005899 ORTHO05D007445 3.3e-40 168.7 132 57.6
SMO367G0143 Selaginella moellendorffii HOM05D005899 ORTHO05D007445 4.3e-40 168.3 124 59.7
TWI56G0091 Tripterygium wilfordii HOM05D005899 ORTHO05D007445 5.6e-40 167.9 127 59.8
MD12G1237200 Malus domestica HOM05D005899 ORTHO05D007445 7.3e-40 167.5 140 55.0
Cpa.g.sc117.66 Carica papaya HOM05D005899 ORTHO05D007445 1.6e-39 166.4 127 57.5
SEGI_33796 Sequoiadendron giganteum HOM05D005899 ORTHO05D007445 3.6e-39 165.2 129 55.0
ECA233G4289 Erigeron canadensis HOM05D005899 ORTHO05D007445 4.7e-39 164.9 128 60.2
HPP92_023141 Vanilla planifolia HOM05D005899 ORTHO05D007445 1.1e-38 163.7 124 59.7
FAN05G4786 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.4e-38 163.3 102 69.6
HanXRQChr02g0057281 Helianthus annuus HOM05D005899 ORTHO05D007445 1.8e-38 162.9 127 56.7
Pp3c6_4500 Physcomitrium patens HOM05D005899 ORTHO05D007445 2.3e-38 162.5 129 55.0
Potri.005G050600 Populus trichocarpa HOM05D005899 ORTHO05D007445 3.1e-38 162.2 127 55.9
SHI18352 Sapria himalayana HOM05D005899 ORTHO05D007445 4.0e-38 161.8 128 56.2
Sabra15G0068500 Salix brachista HOM05D005899 ORTHO05D007445 1.5e-37 159.8 127 55.9
Haze_04330 Corylus avellana HOM05D005899 ORTHO05D007445 1.7e-36 156.4 116 59.5
Sabra15G0056900 Salix brachista HOM05D005899 ORTHO05D007445 2.2e-36 156.0 127 55.1
Sabra15G0057000 Salix brachista HOM05D005899 ORTHO05D007445 2.2e-36 156.0 127 55.1
Sabra15G0068600 Salix brachista HOM05D005899 ORTHO05D007445 2.2e-36 156.0 127 55.1
Cfa006460 Carpinus fangiana HOM05D005899 ORTHO05D007445 1.1e-32 143.7 116 57.8
Eucgr.L02186 Eucalyptus grandis HOM05D005899 ORTHO05D007445 4.7e-31 138.3 127 48.0
Peaxi162Scf00404g00009 Petunia axillaris HOM05D005899 ORTHO05D007445 3.4e-29 132.1 94 63.8
Eucgr.B01712 Eucalyptus grandis HOM05D005899 ORTHO05D007445 1.3e-28 130.2 125 48.0
Cfa006462 Carpinus fangiana HOM05D005899 ORTHO05D007445 2.9e-28 129.0 115 50.4
Eucgr.L02099 Eucalyptus grandis HOM05D005899 ORTHO05D007445 4.1e-27 125.2 103 54.4
Eucgr.B01710 Eucalyptus grandis HOM05D005899 ORTHO05D007445 5.1e-25 118.2 100 53.0
AUR62004985 Chenopodium quinoa HOM05D005899 ORTHO05D007445 2.7e-18 95.9 131 39.7
unitig_21.g20175 Utricularia gibba HOM05D005899 ORTHO05D007445 1.7e-17 93.2 72 55.6
Sabra15G0041400 Salix brachista HOM05D005899 ORTHO05D007445 2.3e-17 92.8 127 38.6
Nn4g26305 Nelumbo nucifera HOM05D005899 ORTHO05D007445 5.6e-16 88.2 67 58.2
Atru.chr2.732 Acer truncatum HOM05D005899 ORTHO05D007445 5.8e-13 78.2 65 52.3
Atru.chr2.745 Acer truncatum HOM05D005899 ORTHO05D007445 5.8e-13 78.2 65 52.3
FAN09G0887 Fragaria x ananassa HOM05D005899 ORTHO05D007445 3.9e-09 65.5 127 33.1


User provided reference genes

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