Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold3110G54276 Striga asiatica HOM05D006226 ORTHO05D007738 6.5e-78 293.9 139 100.0
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 9.1e-72 273.5 132 97.7
SalBow6G3053 Salvia bowleyana HOM05D006226 ORTHO05D007738 2.3e-46 189.1 132 68.2
Rhsim01G0096900 Rhododendron simsii HOM05D006226 ORTHO05D007738 6.2e-44 181.0 126 66.7
Migut.K01516 Erythranthe guttata HOM05D006226 ORTHO05D007738 8.9e-43 177.2 138 64.5
CiPaw.03G218400 Carya illinoinensis HOM05D006226 ORTHO05D007738 2.6e-42 175.6 134 62.7
Nitab4.5_0004070g0080 Nicotiana tabacum HOM05D006226 ORTHO05D007738 2.6e-42 175.6 129 60.5
Nitab4.5_0006735g0020 Nicotiana tabacum HOM05D006226 ORTHO05D007738 5.8e-42 174.5 130 62.3
Ciclev10007624m.g Citrus clementina HOM05D006226 ORTHO05D007738 1.3e-41 173.3 135 62.2
GSVIVG01015381001 Vitis vinifera HOM05D006226 ORTHO05D007738 1.3e-41 173.3 132 59.8
BraA07t28567Z Brassica rapa HOM05D006226 ORTHO05D007738 2.9e-41 172.2 133 59.4
Cfa003249 Carpinus fangiana HOM05D006226 ORTHO05D007738 4.9e-41 171.4 129 60.5
Solyc11g067040.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 4.9e-41 171.4 130 62.3
A07p07760 Brassica napus HOM05D006226 ORTHO05D007738 6.4e-41 171.0 135 58.5
Migut.C00317 Erythranthe guttata HOM05D006226 ORTHO05D007738 8.3e-41 170.6 140 62.1
Migut.G00900 Erythranthe guttata HOM05D006226 ORTHO05D007738 1.1e-40 170.2 116 73.3
BcaB06g26659 Brassica carinata HOM05D006226 ORTHO05D007738 1.9e-40 169.5 133 58.6
Sopen11g026750 Solanum pennellii HOM05D006226 ORTHO05D007738 2.4e-40 169.1 130 61.5
Atru.chr7.1363 Acer truncatum HOM05D006226 ORTHO05D007738 3.2e-40 168.7 136 59.6
Actinidia32679 Actinidia chinensis HOM05D006226 ORTHO05D007738 3.2e-40 168.7 129 62.0
BcaC06g35722 Brassica carinata HOM05D006226 ORTHO05D007738 4.1e-40 168.3 133 57.9
C07p11670 Brassica napus HOM05D006226 ORTHO05D007738 4.1e-40 168.3 133 57.9
BolC7t41639H Brassica oleracea HOM05D006226 ORTHO05D007738 4.1e-40 168.3 133 57.9
Lj7C652G7 Lonicera japonica HOM05D006226 ORTHO05D007738 5.4e-40 167.9 120 63.3
unitig_748.g7367 Utricularia gibba HOM05D006226 ORTHO05D007738 7.0e-40 167.5 149 57.0
HanXRQChr12g0354991 Helianthus annuus HOM05D006226 ORTHO05D007738 9.2e-40 167.2 132 57.6
PSO210G1415 Papaver somniferum HOM05D006226 ORTHO05D007738 1.6e-39 166.4 137 56.2
Aa31sc29G50 Aethionema arabicum HOM05D006226 ORTHO05D007738 2.0e-39 166.0 132 59.1
QL02p040023 Quercus lobata HOM05D006226 ORTHO05D007738 2.7e-39 165.6 120 63.3
Sp3g22350 Schrenkiella parvula HOM05D006226 ORTHO05D007738 2.7e-39 165.6 133 57.1
CAN.G644.14 Capsicum annuum HOM05D006226 ORTHO05D007738 3.5e-39 165.2 133 57.9
Lalb_Chr06g0174391 Lupinus albus HOM05D006226 ORTHO05D007738 3.5e-39 165.2 122 60.7
Carub.0003s2495 Capsella rubella HOM05D006226 ORTHO05D007738 6.0e-39 164.5 133 57.1
COL.COLO4_34848 Corchorus olitorius HOM05D006226 ORTHO05D007738 6.0e-39 164.5 129 57.4
Potri.018G081500 Populus trichocarpa HOM05D006226 ORTHO05D007738 6.0e-39 164.5 136 56.6
ClCG06G008620 Citrullus lanatus HOM05D006226 ORTHO05D007738 7.8e-39 164.1 133 57.9
MELO3C024624.2 Cucumis melo HOM05D006226 ORTHO05D007738 7.8e-39 164.1 132 57.6
Nn8g39152 Nelumbo nucifera HOM05D006226 ORTHO05D007738 7.8e-39 164.1 132 58.3
Haze_25736 Corylus avellana HOM05D006226 ORTHO05D007738 1.0e-38 163.7 118 63.6
Sabra18G0068600 Salix brachista HOM05D006226 ORTHO05D007738 1.0e-38 163.7 136 57.4
PSO210G0226 Papaver somniferum HOM05D006226 ORTHO05D007738 1.7e-38 162.9 122 60.7
Glyma.07G085400 Glycine max HOM05D006226 ORTHO05D007738 2.3e-38 162.5 120 62.5
Psat1g043440 Pisum sativum HOM05D006226 ORTHO05D007738 2.3e-38 162.5 129 57.4
PGR142G1694 Punica granatum HOM05D006226 ORTHO05D007738 2.3e-38 162.5 124 62.1
CsaV3_1G025440 Cucumis sativus L. HOM05D006226 ORTHO05D007738 3.9e-38 161.8 132 56.8
Thhalv10002431m.g Eutrema salsugineum HOM05D006226 ORTHO05D007738 3.9e-38 161.8 134 56.7
arahy.Tifrunner.gnm1.ann1.9IQ1SY Arachis hypogaea HOM05D006226 ORTHO05D007738 5.0e-38 161.4 120 62.5
Cc06_g09770 Coffea canephora HOM05D006226 ORTHO05D007738 6.6e-38 161.0 130 60.8
PGSC0003DMG400026545 Solanum tuberosum HOM05D006226 ORTHO05D007738 6.6e-38 161.0 118 61.9
VMungo0464G1421 Vigna mungo HOM05D006226 ORTHO05D007738 6.6e-38 161.0 120 61.7
Medtr6g087530 Medicago truncatula HOM05D006226 ORTHO05D007738 8.6e-38 160.6 124 58.9
CARHR100790 Cardamine hirsuta HOM05D006226 ORTHO05D007738 1.1e-37 160.2 133 55.6
Lj2g0027193 Lotus japonicus HOM05D006226 ORTHO05D007738 1.1e-37 160.2 120 60.8
arahy.Tifrunner.gnm1.ann1.ZKYF3I Arachis hypogaea HOM05D006226 ORTHO05D007738 1.5e-37 159.8 120 61.7
MD15G1183800 Malus domestica HOM05D006226 ORTHO05D007738 1.5e-37 159.8 120 63.3
Gorai.009G025300 Gossypium raimondii HOM05D006226 ORTHO05D007738 3.3e-37 158.7 120 60.0
TPR.G10046 Trifolium pratense HOM05D006226 ORTHO05D007738 3.3e-37 158.7 124 58.1
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 3.3e-37 158.7 133 55.6
CANSAT56G2062 Cannabis sativa HOM05D006226 ORTHO05D007738 4.3e-37 158.3 120 59.2
Phvul.004G164600 Phaseolus vulgaris HOM05D006226 ORTHO05D007738 4.3e-37 158.3 118 60.2
CANSAT56G3567 Cannabis sativa HOM05D006226 ORTHO05D007738 5.6e-37 157.9 120 59.2
Glyma.09G191500 Glycine max HOM05D006226 ORTHO05D007738 9.5e-37 157.1 120 60.8
Gohir.A05G023700 Gossypium hirsutum HOM05D006226 ORTHO05D007738 9.5e-37 157.1 120 59.2
AT3G24560 Arabidopsis thaliana HOM05D006226 ORTHO05D007738 1.2e-36 156.8 132 56.1
CDE04G3650 Ceratophyllum demersum HOM05D001758 ORTHO05D005969 1.2e-36 156.8 120 60.8
Lsat_1_v5_gn_8_3640 Lactuca sativa HOM05D006226 ORTHO05D007738 2.8e-36 155.6 140 52.9
Prupe.7G232400 Prunus persica HOM05D006226 ORTHO05D007738 6.2e-36 154.5 120 60.8
Sed0016798 Sechium edule HOM05D006226 ORTHO05D007738 6.2e-36 154.5 129 56.6
THA.LOC104808766 Tarenaya hassleriana HOM05D006226 ORTHO05D007738 6.2e-36 154.5 132 56.1
vmacro20706 Vaccinium macrocarpon HOM05D006226 ORTHO05D007738 6.2e-36 154.5 193 45.6
Manes.16G114900 Manihot esculenta HOM05D006226 ORTHO05D007738 1.1e-35 153.7 134 56.7
Thecc.09G109000 Theobroma cacao HOM05D006226 ORTHO05D007738 1.4e-35 153.3 135 54.1
Aqoxy7G03848 Aquilegia oxysepala HOM05D006226 ORTHO05D007738 3.1e-35 152.1 133 53.4
FvH4_1g04570 Fragaria vesca HOM05D006226 ORTHO05D007738 5.2e-35 151.4 129 57.4
FAN19G1825 Fragaria x ananassa HOM05D006226 ORTHO05D007738 5.2e-35 151.4 129 57.4
FAN23G2910 Fragaria x ananassa HOM05D006226 ORTHO05D007738 6.8e-35 151.0 129 57.4
RcHm_v2.0_Chr2g0090271 Rosa chinensis HOM05D006226 ORTHO05D007738 6.8e-35 151.0 120 60.8
FAN26G0472 Fragaria x ananassa HOM05D006226 ORTHO05D007738 8.9e-35 150.6 129 57.4
ECA233G1203 Erigeron canadensis HOM05D006226 ORTHO05D007738 4.4e-34 148.3 107 61.7
Peaxi162Scf01284g00025 Petunia axillaris HOM05D006226 ORTHO05D007738 4.9e-33 144.8 127 57.5
AL3G40100 Arabidopsis lyrata HOM05D006226 ORTHO05D007738 1.4e-32 143.3 107 61.7
Os02g0266500 Oryza sativa ssp. japonica HOM05D006226 ORTHO05D007738 1.9e-32 142.9 130 53.1
Sc16g0007880 Simmondsia chinensis HOM05D006226 ORTHO05D007738 1.2e-31 140.2 120 54.2
AUR62021510 Chenopodium quinoa HOM05D006226 ORTHO05D007738 2.1e-31 139.4 134 52.2
AUR62010999 Chenopodium quinoa HOM05D006226 ORTHO05D007738 2.7e-31 139.0 138 52.2
Eucgr.C01033 Eucalyptus grandis HOM05D006226 ORTHO05D007738 6.0e-31 137.9 107 59.8
Cpa.g.sc23.97 Carica papaya HOM05D006226 ORTHO05D007738 7.8e-31 137.5 107 59.8
EL10Ac8g18501 Beta vulgaris HOM05D006226 ORTHO05D007738 2.3e-30 136.0 133 51.9
Zm00001eb237720 Zea mays HOM05D006226 ORTHO05D007738 3.0e-30 135.6 122 54.1
Dinv36642 Davidia involucrata HOM05D006226 ORTHO05D007738 4.4e-26 121.7 88 62.5
Hund09200 Selenicereus undatus HOM05D006226 ORTHO05D007738 2.2e-25 119.4 117 51.3
Mapoly0045s0077 Marchantia polymorpha HOM05D006226 ORTHO05D007738 8.4e-25 117.5 116 49.1
DCAR_002532 Daucus carota HOM05D006226 ORTHO05D007738 1.4e-24 116.7 109 51.4
AagrBONN_evm.TU.Sc2ySwM_368.2586 Anthoceros agrestis HOM05D006226 ORTHO05D007738 1.2e-23 113.6 121 47.1
CSS0010508 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 1.2e-23 113.6 85 61.2
CSS0044649 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 1.2e-23 113.6 85 61.2
ATR0315G013 Amborella trichopoda HOM05D006226 ORTHO05D007738 1.3e-22 110.2 95 54.7
SMO170G0077 Selaginella moellendorffii HOM05D006226 ORTHO05D007738 2.6e-18 95.9 119 39.5
SEGI_25817 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 9.3e-16 87.4 79 53.2
HPP92_005262 Vanilla planifolia HOM05D006226 ORTHO05D007738 1.6e-15 86.7 77 55.8
CBR_g23439 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-14 83.6 116 42.2
MBI04_g22018_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 3.9e-14 82.0 65 58.5
FAN28G0796 Fragaria x ananassa HOM05D006226 ORTHO05D007738 7.6e-10 67.8 67 56.7
ECA234G2375 Erigeron canadensis HOM05D006226 ORTHO05D007738 1.1e-08 63.9 85 37.6


User provided reference genes

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