Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 6.9e-173 610.5 306 100.0
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 1.0e-163 580.1 306 95.4
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 4.5e-132 474.9 306 77.8
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 7.2e-130 467.6 306 77.1
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 3.0e-128 462.2 306 75.5
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 5.2e-128 461.5 306 74.8
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 6.8e-128 461.1 306 75.5
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 4.4e-127 458.4 304 74.7
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 4.4e-127 458.4 304 75.0
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 9.8e-127 457.2 306 73.9
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 5.4e-125 451.4 306 74.2
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 1.6e-124 449.9 306 74.5
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 3.5e-124 448.7 306 71.9
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 7.8e-124 447.6 303 71.3
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 1.0e-123 447.2 304 73.7
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 2.3e-123 446.0 306 71.9
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 6.6e-123 444.5 298 73.8
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 6.6e-123 444.5 304 72.7
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 1.1e-122 443.7 302 73.2
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.5e-122 443.4 306 72.9
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 1.9e-122 443.0 304 72.7
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 2.5e-122 442.6 304 70.4
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 2.5e-122 442.6 306 71.9
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 3.3e-122 442.2 304 72.4
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 4.3e-122 441.8 302 71.9
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 4.3e-122 441.8 306 72.2
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 4.3e-122 441.8 306 71.6
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 5.6e-122 441.4 304 71.1
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 5.6e-122 441.4 306 71.9
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 5.6e-122 441.4 306 72.5
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 7.3e-122 441.0 306 72.5
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 9.5e-122 440.7 304 70.1
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 1.6e-121 439.9 306 71.9
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 1.6e-121 439.9 305 73.4
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 2.1e-121 439.5 306 70.9
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 2.8e-121 439.1 306 72.2
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 4.7e-121 438.3 306 69.9
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 4.7e-121 438.3 306 69.9
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 8.0e-121 437.6 304 71.4
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 8.0e-121 437.6 306 70.9
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 8.0e-121 437.6 306 71.9
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 1.0e-120 437.2 304 71.1
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 1.0e-120 437.2 304 71.1
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 1.4e-120 436.8 302 72.2
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 2.3e-120 436.0 306 70.3
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 3.1e-120 435.6 306 71.6
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 3.1e-120 435.6 304 70.7
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 3.1e-120 435.6 304 70.7
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 4.0e-120 435.3 304 71.7
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 5.2e-120 434.9 306 70.6
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 6.8e-120 434.5 306 70.6
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 6.8e-120 434.5 306 70.6
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 6.8e-120 434.5 303 71.0
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 8.9e-120 434.1 306 71.9
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 2.6e-119 432.6 304 69.7
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 3.4e-119 432.2 306 71.2
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 3.4e-119 432.2 302 70.9
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 3.7e-118 428.7 306 70.3
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 3.7e-118 428.7 302 70.9
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 3.2e-117 425.6 306 69.9
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 3.2e-117 425.6 306 69.9
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 1.2e-116 423.7 304 69.1
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 1.2e-116 423.7 304 69.4
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 3.0e-115 419.1 306 70.3
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 3.0e-115 419.1 304 67.4
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 9.5e-114 414.1 306 70.3
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 9.5e-114 414.1 308 68.8
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 3.6e-113 412.1 309 67.6
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 3.1e-112 409.1 309 67.0
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 3.1e-112 409.1 308 65.9
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 5.2e-112 408.3 303 67.7
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 5.2e-112 408.3 303 67.3
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 6.8e-112 407.9 303 67.0
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 1.2e-111 407.1 303 67.7
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 1.2e-111 407.1 296 69.6
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 4.4e-111 405.2 303 67.3
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 4.4e-111 405.2 303 67.3
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 5.8e-111 404.8 304 65.8
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 9.8e-111 404.1 303 66.7
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 9.8e-111 404.1 303 67.3
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 1.3e-110 403.7 306 67.6
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 3.7e-110 402.1 303 67.0
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 3.7e-110 402.1 303 66.0
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 8.3e-110 401.0 303 67.3
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 8.3e-110 401.0 314 65.3
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 1.1e-109 400.6 303 66.3
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 1.9e-109 399.8 303 66.7
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 2.4e-109 399.4 303 66.7
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 4.1e-109 398.7 303 65.7
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 9.2e-109 397.5 309 67.3
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 2.7e-108 396.0 290 67.2
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 1.0e-107 394.0 303 65.7
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 1.0e-107 394.0 303 65.7
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 1.0e-107 394.0 303 65.7
Solyc08g008250.3 Solanum lycopersicum HOM05D006135 ORTHO05D007533 9.5e-106 387.5 254 75.6
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 2.8e-105 386.0 278 69.8
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 7.5e-103 377.9 305 64.9
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 1.9e-98 363.2 302 61.9
HanXRQChr13g0417131 Helianthus annuus HOM05D006135 ORTHO05D007533 2.5e-98 362.8 252 71.8
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 4.3e-98 362.1 308 60.1
Nitab4.5_0000100g0120 Nicotiana tabacum HOM05D006135 ORTHO05D007533 2.4e-96 356.3 237 75.5
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 8.9e-96 354.4 267 69.3
SalBow6G7020 Salvia bowleyana HOM05D006135 ORTHO05D007533 3.0e-91 339.3 228 72.8
SalBow2G1772 Salvia bowleyana HOM05D006135 ORTHO05D007533 6.6e-91 338.2 224 74.1
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 9.6e-90 334.3 280 60.4
ClCG08G010310 Citrullus lanatus HOM05D006135 ORTHO05D008017 6.4e-86 321.6 241 67.6
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 9.3e-85 317.8 251 64.1
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 2.1e-84 316.6 221 72.4
Duzib251G0397 Durio zibethinus HOM05D006135 ORTHO05D007533 7.8e-84 314.7 238 65.5
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 1.3e-81 307.4 257 59.9
Haze_11974 Corylus avellana HOM05D006135 ORTHO05D007533 6.2e-81 305.1 218 69.3
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 2.4e-80 303.1 339 50.1
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 9.0e-72 274.6 304 50.3
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 1.4e-61 240.7 319 43.6
vmacro19077 Vaccinium macrocarpon HOM05D006135 ORTHO05D007533 1.4e-61 240.7 176 66.5
Oeu025274.1 Olea europaea HOM05D006135 ORTHO05D007533 1.8e-48 197.2 140 71.4
Pp3c8_25320 Physcomitrium patens HOM05D006135 ORTHO05D007533 8.5e-46 188.3 163 61.3
PRCOL_00001916 Prasinoderma coloniale HOM05D006135 ORTHO05D007533 1.1e-40 171.4 343 35.3
SEGI_02005 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 2.2e-38 163.7 111 73.9
GSVIVG01012190001 Vitis vinifera HOM05D001577 ORTHO05D008017 2.2e-38 163.7 306 36.3
MCO02G221 Micromonas commoda HOM05D006135 ORTHO05D007533 7.2e-37 158.7 177 46.9
DCAR_030035 Daucus carota HOM05D006135 ORTHO05D007533 6.5e-30 135.6 91 71.4
Lsat_1_v5_gn_2_78301 Lactuca sativa HOM05D006135 ORTHO05D007533 3.2e-29 133.3 94 75.5
Os11g0312340 Oryza sativa ssp. japonica HOM05D006135 ORTHO05D007533 6.3e-25 119.0 86 72.1
Cfa026301 Carpinus fangiana HOM05D006135 ORTHO05D007533 1.2e-23 114.8 350 30.0
HPP92_017676 Vanilla planifolia HOM05D006135 ORTHO05D007533 7.7e-23 112.1 120 54.2
AagrBONN_evm.TU.Sc2ySwM_362.1915 Anthoceros agrestis HOM05D006135 ORTHO05D007533 1.7e-22 110.9 70 71.4
Dinv16720 Davidia involucrata HOM05D006135 ORTHO05D007533 1.9e-21 107.5 91 56.0
Lalb_Chr17g0339631 Lupinus albus HOM05D006135 ORTHO05D007533 1.8e-16 90.9 64 71.9
Glyma.03G009300 Glycine max HOM05D006135 ORTHO05D007533 8.6e-14 82.0 46 80.4
SEGI_31918 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 3.6e-12 76.6 63 49.2


User provided reference genes

Program Settings