Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold302G47838 Striga asiatica HOM05D044967 ORTHO05D000126 2.2e-168 595.5 293 100.0
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 6.5e-27 125.6 194 32.5
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 2.2e-19 100.5 221 26.7
SGA_v2.0_scaffold68G22947 Striga asiatica HOM05D025057 ORTHO05D000126 3.2e-18 96.7 254 29.9
SGA_v2.0_scaffold23G10019 Striga asiatica HOM05D000003 ORTHO05D000004 4.2e-18 96.3 199 30.2
SGA_v2.0_scaffold61G21290 Striga asiatica HOM05D044967 ORTHO05D406599 4.6e-17 92.8 111 48.6
SGA_v2.0_scaffold79G25635 Striga asiatica HOM05D010621 ORTHO05D000126 4.6e-17 92.8 147 39.5
SGA_v2.0_scaffold7G03666 Striga asiatica HOM05D000198 ORTHO05D005702 5.3e-13 79.3 154 26.6
PGSC0003DMG400020793 Solanum tuberosum HOM05D000003 ORTHO05D000126 1.2e-12 78.2 179 26.3
Nitab4.5_0003490g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000126 1.0e-11 75.1 155 26.5
Cc00_g29920 Coffea canephora HOM05D000003 ORTHO05D000126 1.3e-11 74.7 108 32.4
SGA_v2.0_scaffold321G48584 Striga asiatica HOM05D010621 ORTHO05D000126 4.2e-10 69.7 150 31.3
Nitab4.5_0013082g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000126 5.5e-10 69.3 176 23.3
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 6.1e-09 65.9 194 25.3
SGA_v2.0_scaffold73G24374 Striga asiatica HOM05D010621 ORTHO05D000126 2.3e-08 63.9 153 29.4
Nitab4.5_0011919g0010 Nicotiana tabacum HOM05D007931 ORTHO05D000126 3.0e-08 63.5 162 23.5
Nitab4.5_0012359g0030 Nicotiana tabacum HOM05D000003 ORTHO05D000126 3.9e-08 63.2 147 23.8
Nitab4.5_0001238g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000126 5.1e-08 62.8 197 23.4
Rhsim03G0095500 Rhododendron simsii HOM05D000003 ORTHO05D000126 6.7e-08 62.4 202 23.3
Nitab4.5_0005843g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.3e-07 60.1 162 26.5
Nitab4.5_0000128g0370 Nicotiana tabacum HOM05D007931 ORTHO05D000126 4.4e-07 59.7 111 30.6
Nitab4.5_0002837g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000126 4.4e-07 59.7 155 23.2
SGA_v2.0_scaffold259G45819 Striga asiatica HOM05D000003 ORTHO05D000004 4.4e-07 59.7 114 29.8
SGA_v2.0_scaffold27G11486 Striga asiatica HOM05D000552 ORTHO05D000469 7.4e-07 58.9 186 26.3
SGA_v2.0_scaffold9G04785 Striga asiatica HOM05D017409 ORTHO05D000126 9.7e-07 58.5 201 25.9
Haze_05315 Corylus avellana HOM05D022711 ORTHO05D000126 2.2e-06 57.4 108 31.5
Haze_09938 Corylus avellana HOM05D000003 ORTHO05D000126 2.8e-06 57.0 108 29.6
SGA_v2.0_scaffold4G02180 Striga asiatica HOM05D000688 ORTHO05D004737 4.8e-06 56.2 96 28.1
CSS0016982 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 6.3e-06 55.8 151 25.2
Haze_24509 Corylus avellana HOM05D000003 ORTHO05D000126 6.3e-06 55.8 143 23.8
QL04p056296 Quercus lobata HOM05D000003 ORTHO05D000004 8.2e-06 55.5 155 25.2


User provided reference genes

Program Settings