Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2G01323 Striga asiatica HOM05D006521 ORTHO05D008087 4.6e-233 810.8 406 100.0
SalBow3G0008 Salvia bowleyana HOM05D006521 ORTHO05D008087 4.9e-174 614.8 377 81.2
Migut.H02388 Erythranthe guttata HOM05D006521 ORTHO05D008087 2.8e-169 599.0 358 81.8
Oeu053565.1 Olea europaea HOM05D006521 ORTHO05D008087 2.1e-161 572.8 387 74.9
unitig_32.g11814 Utricularia gibba HOM05D006521 ORTHO05D008087 1.5e-146 523.5 354 72.6
Cc07_g15580 Coffea canephora HOM05D006521 ORTHO05D008087 4.2e-141 505.4 382 70.2
Hma1.2p1_0011F.1_g007170 Hydrangea macrophylla HOM05D006521 ORTHO05D008087 1.8e-136 490.0 357 68.3
Dinv16313 Davidia involucrata HOM05D006521 ORTHO05D008087 1.2e-135 487.3 380 64.7
Dinv00937 Davidia involucrata HOM05D006521 ORTHO05D008087 2.0e-135 486.5 380 64.7
TAR376G0467 Trochodendron aralioides HOM05D006521 ORTHO05D008087 3.0e-131 472.6 357 66.4
HanXRQChr16g0527921 Helianthus annuus HOM05D006521 ORTHO05D008087 1.1e-130 470.7 354 64.7
Sopen05g030360 Solanum pennellii HOM05D006521 ORTHO05D008087 2.5e-130 469.5 355 67.3
Nitab4.5_0000715g0180 Nicotiana tabacum HOM05D006521 ORTHO05D008087 3.3e-130 469.2 376 64.4
PGSC0003DMG400021832 Solanum tuberosum HOM05D006521 ORTHO05D008087 7.4e-130 468.0 370 65.1
Solyc05g051840.1 Solanum lycopersicum HOM05D006521 ORTHO05D008087 2.1e-129 466.5 370 64.9
CANSAT01G1058 Cannabis sativa HOM05D006521 ORTHO05D008087 1.4e-128 463.8 361 65.9
MELO3C007776.2 Cucumis melo HOM05D006521 ORTHO05D008087 5.3e-128 461.8 360 64.7
arahy.Tifrunner.gnm1.ann1.2NAN3W Arachis hypogaea HOM05D006521 ORTHO05D008087 6.9e-128 461.5 361 64.8
arahy.Tifrunner.gnm1.ann1.IK9JFE Arachis hypogaea HOM05D006521 ORTHO05D008087 9.0e-128 461.1 369 64.0
Sed0002886 Sechium edule HOM05D006521 ORTHO05D008087 9.0e-128 461.1 389 62.5
ClCG01G018970 Citrullus lanatus HOM05D006521 ORTHO05D008087 2.0e-127 459.9 360 65.0
RcHm_v2.0_Chr2g0115391 Rosa chinensis HOM05D006521 ORTHO05D008087 5.8e-127 458.4 364 63.5
Lsat_1_v5_gn_4_21220 Lactuca sativa HOM05D006521 ORTHO05D008087 7.6e-127 458.0 378 62.7
Thecc.01G106200 Theobroma cacao HOM05D006521 ORTHO05D008087 7.6e-127 458.0 359 63.5
Lalb_Chr11g0075241 Lupinus albus HOM05D006521 ORTHO05D008087 1.3e-126 457.2 355 65.4
PSO447G0171 Papaver somniferum HOM05D006521 ORTHO05D008087 4.9e-126 455.3 355 63.9
Ca_16545_v3 Cicer arietinum L. HOM05D006521 ORTHO05D008087 6.4e-126 454.9 367 64.9
Phvul.001G250400 Phaseolus vulgaris HOM05D006521 ORTHO05D008087 6.4e-126 454.9 340 66.8
Aqoxy5G01962 Aquilegia oxysepala HOM05D006521 ORTHO05D008087 8.4e-126 454.5 361 63.2
Glyma.18G019200 Glycine max HOM05D006521 ORTHO05D008087 1.1e-125 454.1 351 65.5
VMungo1383G3636 Vigna mungo HOM05D006521 ORTHO05D008087 1.1e-125 454.1 376 61.7
Psat5g088760 Pisum sativum HOM05D006521 ORTHO05D008087 1.9e-125 453.4 355 65.4
CsaV3_6G045650 Cucumis sativus L. HOM05D006521 ORTHO05D008087 2.4e-125 453.0 360 63.6
Manes.12G138400 Manihot esculenta HOM05D006521 ORTHO05D008087 2.4e-125 453.0 373 64.3
Medtr3g087760 Medicago truncatula HOM05D006521 ORTHO05D008087 3.2e-125 452.6 368 64.4
PSO210G2459 Papaver somniferum HOM05D006521 ORTHO05D008087 4.2e-125 452.2 355 63.7
Duzib147G0857 Durio zibethinus HOM05D006521 ORTHO05D008087 7.1e-125 451.4 360 62.5
Prupe.3G102100 Prunus persica HOM05D006521 ORTHO05D008087 9.3e-125 451.1 356 63.8
CAN.G1494.2 Capsicum annuum HOM05D006521 ORTHO05D008087 3.5e-124 449.1 378 61.1
Eucgr.I00394 Eucalyptus grandis HOM05D006521 ORTHO05D008087 4.6e-124 448.7 363 64.2
Glyma.11G238100 Glycine max HOM05D006521 ORTHO05D008087 4.6e-124 448.7 356 63.5
Lj6g0010661 Lotus japonicus HOM05D006521 ORTHO05D008087 6.0e-124 448.4 365 63.6
QL06p050323 Quercus lobata HOM05D006521 ORTHO05D008087 6.0e-124 448.4 368 63.0
TWI74G1358 Tripterygium wilfordii HOM05D006521 ORTHO05D008087 6.0e-124 448.4 357 64.4
PGR004G2411 Punica granatum HOM05D006521 ORTHO05D008087 7.9e-124 448.0 355 65.6
Atru.chr4.229 Acer truncatum HOM05D006521 ORTHO05D008087 1.0e-123 447.6 370 63.2
FAN28G0591 Fragaria x ananassa HOM05D006521 ORTHO05D008087 1.3e-123 447.2 365 63.3
Ciclev10025891m.g Citrus clementina HOM05D006521 ORTHO05D008087 3.0e-123 446.0 372 61.8
FAN19G2752 Fragaria x ananassa HOM05D006521 ORTHO05D008087 8.7e-123 444.5 366 63.4
Cpa.g.sc20.228 Carica papaya HOM05D006521 ORTHO05D008087 1.1e-122 444.1 357 63.0
FvH4_1g21530 Fragaria vesca HOM05D006521 ORTHO05D008087 2.5e-122 443.0 366 63.1
Sed0013283 Sechium edule HOM05D006521 ORTHO05D008087 4.3e-122 442.2 372 60.8
ECA234G2647 Erigeron canadensis HOM05D006521 ORTHO05D008087 5.6e-122 441.8 362 61.0
FAN23G2501 Fragaria x ananassa HOM05D006521 ORTHO05D008087 1.3e-121 440.7 366 63.1
TWI77G0511 Tripterygium wilfordii HOM05D006521 ORTHO05D008087 1.6e-121 440.3 358 63.4
Gorai.007G061700 Gossypium raimondii HOM05D006521 ORTHO05D008087 2.8e-121 439.5 367 60.2
Sc16g0005450 Simmondsia chinensis HOM05D006521 ORTHO05D008087 4.8e-121 438.7 345 67.8
Duzib264G0874 Durio zibethinus HOM05D006521 ORTHO05D008087 2.6e-119 433.0 359 60.7
Potri.005G079300 Populus trichocarpa HOM05D006521 ORTHO05D008087 7.6e-119 431.4 371 61.7
DCAR_011503 Daucus carota HOM05D006521 ORTHO05D008087 1.3e-118 430.6 366 61.7
Lsat_1_v5_gn_2_67800 Lactuca sativa HOM05D006521 ORTHO05D008087 3.8e-118 429.1 343 62.4
TPR.G22881 Trifolium pratense HOM05D006521 ORTHO05D008087 3.8e-118 429.1 395 59.0
Rhsim10G0157900 Rhododendron simsii HOM05D006521 ORTHO05D008087 8.4e-118 427.9 375 60.3
Gorai.008G103700 Gossypium raimondii HOM05D006521 ORTHO05D008087 1.1e-117 427.6 360 59.7
Carub.0007s0173 Capsella rubella HOM05D006521 ORTHO05D008087 4.2e-117 425.6 403 55.3
THA.LOC104807700 Tarenaya hassleriana HOM05D006521 ORTHO05D008087 4.2e-117 425.6 349 62.5
THA.LOC104824871 Tarenaya hassleriana HOM05D006521 ORTHO05D008087 4.2e-117 425.6 370 60.5
Thhalv10025314m.g Eutrema salsugineum HOM05D006521 ORTHO05D008087 5.5e-117 425.2 351 60.1
AT4G39820 Arabidopsis thaliana HOM05D006521 ORTHO05D008087 6.0e-116 421.8 394 55.6
Sabra05G0065200 Salix brachista HOM05D006521 ORTHO05D004292 7.9e-116 421.4 361 61.2
A08p23330 Brassica napus HOM05D006521 ORTHO05D008087 1.0e-115 421.0 355 60.6
BraA08t34287Z Brassica rapa HOM05D006521 ORTHO05D008087 1.0e-115 421.0 355 60.6
AL7G12040 Arabidopsis lyrata HOM05D006521 ORTHO05D008087 1.8e-115 420.2 395 55.2
Aa31LG6G15450 Aethionema arabicum HOM05D006521 ORTHO05D008087 2.3e-115 419.9 380 58.9
HanXRQChr15g0471711 Helianthus annuus HOM05D006521 ORTHO05D008087 5.1e-115 418.7 342 60.8
C03p78340 Brassica napus HOM05D006521 ORTHO05D008087 8.7e-115 417.9 370 58.9
BolC3t20094H Brassica oleracea HOM05D006521 ORTHO05D008087 8.7e-115 417.9 372 58.9
CARHR246880 Cardamine hirsuta HOM05D006521 ORTHO05D008087 8.7e-115 417.9 398 55.3
Sp7g36070 Schrenkiella parvula HOM05D006521 ORTHO05D008087 8.7e-115 417.9 401 55.9
Ah.02g122760 Amaranthus hybridus HOM05D006521 ORTHO05D008087 1.1e-114 417.5 367 58.3
AUR62002034 Chenopodium quinoa HOM05D006521 ORTHO05D008087 4.8e-113 412.1 354 61.0
AUR62003763 Chenopodium quinoa HOM05D006521 ORTHO05D008087 6.3e-113 411.8 354 61.3
Ah.02g120360 Amaranthus hybridus HOM05D006521 ORTHO05D008087 2.4e-112 409.8 362 57.7
SHI11594 Sapria himalayana HOM05D006521 ORTHO05D008087 2.0e-111 406.8 381 58.0
Nitab4.5_0005597g0010 Nicotiana tabacum HOM05D006521 ORTHO05D008087 5.5e-109 398.7 374 58.3
Hund13498 Selenicereus undatus HOM05D006521 ORTHO05D008087 1.2e-108 397.5 369 55.8
Lj4A881T25 Lonicera japonica HOM05D006521 ORTHO05D008087 1.8e-107 393.7 376 57.2
Haze_24978 Corylus avellana HOM05D006521 ORTHO05D008087 6.7e-107 391.7 373 56.0
CiPaw.03G138700 Carya illinoinensis HOM05D006521 ORTHO05D008087 7.4e-106 388.3 357 56.0
Lj4A883T21 Lonicera japonica HOM05D006521 ORTHO05D008087 2.9e-102 376.3 368 56.2
Cfa002704 Carpinus fangiana HOM05D006521 ORTHO05D008087 1.8e-99 367.1 373 53.9
ATR0789G153 Amborella trichopoda HOM05D006521 ORTHO05D008087 1.1e-98 364.4 492 43.1
HPP92_016137 Vanilla planifolia HOM05D006521 ORTHO05D008087 1.5e-98 364.0 378 54.0
Nn1g05268 Nelumbo nucifera HOM05D006521 ORTHO05D008087 5.0e-94 349.0 319 56.7
Actinidia36602 Actinidia chinensis HOM05D006521 ORTHO05D008087 4.7e-92 342.4 316 57.3
CDE10G1235 Ceratophyllum demersum HOM05D006521 ORTHO05D008087 6.3e-89 332.0 379 48.8
Atru.chr1.3715 Acer truncatum HOM05D006521 ORTHO05D008087 1.1e-88 331.3 353 52.7
BcaNung05326 Brassica carinata HOM05D006521 ORTHO05D008087 1.2e-84 317.8 321 52.6
COL.COLO4_09911 Corchorus olitorius HOM05D006521 ORTHO05D008087 3.3e-82 309.7 371 48.8
C01p00850 Brassica napus HOM05D006521 ORTHO05D008087 1.1e-77 294.7 357 47.1
SEGI_26188 Sequoiadendron giganteum HOM05D006521 ORTHO05D008087 1.1e-72 278.1 561 33.7
EL10Ac6g15070 Beta vulgaris HOM05D006521 ORTHO05D008087 2.0e-71 273.9 200 67.0
Os02g0550400 Oryza sativa ssp. japonica HOM05D006521 ORTHO05D008087 1.0e-70 271.6 339 48.1
Mapoly0165s0018 Marchantia polymorpha HOM05D006521 ORTHO05D008087 1.1e-69 268.1 489 36.4
SMO353G0213 Selaginella moellendorffii HOM05D006521 ORTHO05D008087 6.8e-67 258.8 351 42.2
AagrBONN_evm.TU.Sc2ySwM_368.767 Anthoceros agrestis HOM05D006521 ORTHO05D008087 9.8e-66 255.0 421 37.1
Pp3c22_3810 Physcomitrium patens HOM05D006521 ORTHO05D008087 2.2e-65 253.8 454 37.9
Pp3c19_5060 Physcomitrium patens HOM05D006521 ORTHO05D008087 6.3e-65 252.3 442 37.6
ECA238G1388 Erigeron canadensis HOM05D001700 ORTHO05D002131 8.6e-62 241.9 172 66.9
ECA238G2228 Erigeron canadensis HOM05D006521 ORTHO05D008087 4.3e-61 239.6 156 71.8
Atru.chr1.3697 Acer truncatum HOM05D006521 ORTHO05D008087 1.2e-58 231.5 147 78.9
Pp3c10_9400 Physcomitrium patens HOM05D006521 ORTHO05D008087 2.2e-57 227.3 403 33.5
A01p00740 Brassica napus HOM05D006521 ORTHO05D008087 4.9e-57 226.1 266 47.4
Peaxi162Scf00295g00033 Petunia axillaris HOM05D006521 ORTHO05D008087 2.7e-55 220.3 178 63.5
Pp3c14_5890 Physcomitrium patens HOM05D006521 ORTHO05D008087 6.6e-54 215.7 401 33.4
BcaNung00904 Brassica carinata HOM05D006521 ORTHO05D008087 7.5e-50 202.2 117 82.9
HanXRQChr10g0288811 Helianthus annuus HOM05D006521 ORTHO05D008087 1.2e-39 168.3 105 81.0
CBR_g34484 Chara braunii HOM05D006521 ORTHO05D008087 2.1e-36 157.5 248 37.1
TAR636G0192 Trochodendron aralioides HOM05D006521 ORTHO05D008087 1.7e-25 121.3 126 51.6
FAN13G3020 Fragaria x ananassa HOM05D005489 ORTHO05D006629 2.7e-15 87.4 110 43.6
GSVIVG01022164001 Vitis vinifera HOM05D006521 ORTHO05D008087 1.6e-12 78.2 68 52.9
PRCOL_00001846 Prasinoderma coloniale HOM05D006521 ORTHO05D008087 1.4e-11 75.1 277 26.4
Atru.chr1.3698 Acer truncatum HOM05D006521 ORTHO05D008087 2.6e-10 70.9 75 49.3


User provided reference genes

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