Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2G01076 Striga asiatica HOM05D005908 ORTHO05D007235 1.0e-179 633.3 322 100.0
MSTRG.8762 Avicennia marina HOM05D005908 ORTHO05D007235 1.2e-98 364.0 314 63.1
SalBow1G0690 Salvia bowleyana HOM05D005908 ORTHO05D007235 1.3e-97 360.5 312 63.5
Migut.F00374 Erythranthe guttata HOM05D005908 ORTHO05D007235 9.4e-96 354.4 315 61.9
Actinidia32893 Actinidia chinensis HOM05D005908 ORTHO05D007235 2.0e-90 336.7 322 57.1
Oeu030124.1 Olea europaea HOM05D005908 ORTHO05D007235 1.5e-88 330.5 288 59.7
Dinv35179 Davidia involucrata HOM05D005908 ORTHO05D007235 1.8e-86 323.6 274 60.2
Lj1A993G71 Lonicera japonica HOM05D005908 ORTHO05D007235 4.4e-85 318.9 323 54.5
vmacro08977 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 1.7e-84 317.0 328 51.8
GSVIVG01010617001 Vitis vinifera HOM05D005908 ORTHO05D007235 4.8e-84 315.5 268 60.8
Hma1.2p1_0270F.1_g108430 Hydrangea macrophylla HOM05D005908 ORTHO05D007235 2.4e-83 313.2 273 60.4
TAR375G0795 Trochodendron aralioides HOM05D005908 ORTHO05D007235 2.4e-83 313.2 306 55.9
QL09p014976 Quercus lobata HOM05D005908 ORTHO05D007235 1.6e-82 310.5 316 53.2
CAN.G548.2 Capsicum annuum HOM05D005908 ORTHO05D007235 1.3e-81 307.4 316 53.2
CiPaw.04G067300 Carya illinoinensis HOM05D005908 ORTHO05D007235 1.3e-81 307.4 318 53.1
Cc10_g10330 Coffea canephora HOM05D005908 ORTHO05D007235 1.7e-81 307.0 325 54.2
DCAR_009351 Daucus carota HOM05D005908 ORTHO05D007235 2.2e-81 306.6 283 55.5
Cfa008281 Carpinus fangiana HOM05D005908 ORTHO05D007235 6.5e-81 305.1 226 64.2
TWI23G0151 Tripterygium wilfordii HOM05D005908 ORTHO05D007235 6.5e-81 305.1 268 57.8
RcHm_v2.0_Chr1g0376741 Rosa chinensis HOM05D005908 ORTHO05D007235 1.1e-80 304.3 314 54.8
Nn6g34248 Nelumbo nucifera HOM05D005908 ORTHO05D007235 1.9e-80 303.5 324 52.8
TWI39G0968 Tripterygium wilfordii HOM05D005908 ORTHO05D007235 3.2e-80 302.8 287 55.7
FAN06G0652 Fragaria x ananassa HOM05D005908 ORTHO05D007235 9.4e-80 301.2 293 55.3
VMungo0464G0636 Vigna mungo HOM05D005908 ORTHO05D007235 1.2e-79 300.8 316 51.6
FvH4_7g15530 Fragaria vesca HOM05D005908 ORTHO05D007235 2.1e-79 300.1 293 55.3
FAN06G2086 Fragaria x ananassa HOM05D005908 ORTHO05D007235 2.1e-79 300.1 293 55.3
CsaV3_3G016830 Cucumis sativus L. HOM05D005908 ORTHO05D007235 2.7e-79 299.7 272 57.0
Lsat_1_v5_gn_2_133120 Lactuca sativa HOM05D005908 ORTHO05D007235 2.7e-79 299.7 300 54.7
Eucgr.K00226 Eucalyptus grandis HOM05D005908 ORTHO05D007235 4.7e-79 298.9 313 52.4
FAN10G2728 Fragaria x ananassa HOM05D005908 ORTHO05D007235 6.1e-79 298.5 293 54.9
Potri.015G138400 Populus trichocarpa HOM05D005908 ORTHO05D007235 6.1e-79 298.5 315 51.7
Sabra15G0149500 Salix brachista HOM05D005908 ORTHO05D007235 6.1e-79 298.5 310 51.6
Sopen03g005070 Solanum pennellii HOM05D005908 ORTHO05D007235 6.1e-79 298.5 316 52.2
Solyc03g026200.4 Solanum lycopersicum HOM05D005908 ORTHO05D007235 8.0e-79 298.1 316 51.9
FAN01G2408 Fragaria x ananassa HOM05D005908 ORTHO05D007235 1.4e-78 297.4 293 55.3
HanXRQChr07g0206851 Helianthus annuus HOM05D005908 ORTHO05D007235 3.0e-78 296.2 305 55.7
PGSC0003DMG402014313 Solanum tuberosum HOM05D005908 ORTHO05D007235 3.0e-78 296.2 315 51.1
MD13G1243600 Malus domestica HOM05D005908 ORTHO05D007235 8.8e-78 294.7 314 51.9
FAN03G0397 Fragaria x ananassa HOM05D005908 ORTHO05D007235 1.2e-77 294.3 293 54.6
ClCG05G007830 Citrullus lanatus HOM05D005908 ORTHO05D007235 2.0e-77 293.5 272 56.6
Sed0015226 Sechium edule HOM05D005908 ORTHO05D007235 2.6e-77 293.1 308 51.3
FAN10G3232 Fragaria x ananassa HOM05D005908 ORTHO05D007235 4.4e-77 292.4 293 53.9
Rhsim04G0117700 Rhododendron simsii HOM05D005908 ORTHO05D007235 7.5e-77 291.6 374 46.8
PSO782G1770 Papaver somniferum HOM05D005908 ORTHO05D007235 1.3e-76 290.8 291 52.6
Thecc.03G170900 Theobroma cacao HOM05D005908 ORTHO05D007235 1.7e-76 290.4 273 56.4
Aqoxy7G00441 Aquilegia oxysepala HOM05D005908 ORTHO05D007235 2.2e-76 290.0 304 53.9
Atru.chr1.515 Acer truncatum HOM05D005908 ORTHO05D007235 3.7e-76 289.3 293 52.9
Gohir.D09G040800 Gossypium hirsutum HOM05D005908 ORTHO05D007235 4.9e-76 288.9 284 54.6
TPR.G5821 Trifolium pratense HOM05D005908 ORTHO05D007235 4.9e-76 288.9 273 54.9
Gorai.006G046700 Gossypium raimondii HOM05D005908 ORTHO05D007235 1.4e-75 287.3 284 54.2
PSO478G3277 Papaver somniferum HOM05D005908 ORTHO05D007235 1.4e-75 287.3 275 54.9
CANSAT21G0021 Cannabis sativa HOM05D005908 ORTHO05D007235 1.8e-75 287.0 317 50.8
vmacro06719 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 2.4e-75 286.6 320 50.3
MBI12_g29759_MAGBIO Magnolia biondii HOM05D005908 ORTHO05D007235 4.1e-75 285.8 267 55.1
CANSAT21G0323 Cannabis sativa HOM05D005908 ORTHO05D007235 9.2e-75 284.6 317 50.5
ECA238G1518 Erigeron canadensis HOM05D005908 ORTHO05D007235 1.6e-74 283.9 308 52.3
Glyma.16G198400 Glycine max HOM05D005908 ORTHO05D007235 1.6e-74 283.9 265 55.1
Lalb_Chr01g0009141 Lupinus albus HOM05D005908 ORTHO05D007235 2.0e-74 283.5 270 54.8
Manes.06G144000 Manihot esculenta HOM05D005908 ORTHO05D007235 2.0e-74 283.5 312 50.3
Ciclev10005584m.g Citrus clementina HOM05D005908 ORTHO05D007235 3.5e-74 282.7 279 54.1
COL.COLO4_14265 Corchorus olitorius HOM05D005908 ORTHO05D007235 3.5e-74 282.7 273 53.8
Nitab4.5_0001083g0110 Nicotiana tabacum HOM05D005908 ORTHO05D007235 7.3e-72 275.0 272 55.1
Psat1g113160 Pisum sativum HOM05D005908 ORTHO05D007235 1.6e-71 273.9 265 54.0
arahy.Tifrunner.gnm1.ann1.K8NCYF Arachis hypogaea HOM05D005908 ORTHO05D007235 3.6e-71 272.7 338 47.6
Lj4g0016789 Lotus japonicus HOM05D005908 ORTHO05D007235 3.6e-71 272.7 271 51.7
Cpa.g.sc107.9 Carica papaya HOM05D005908 ORTHO05D007235 6.1e-71 271.9 267 53.6
arahy.Tifrunner.gnm1.ann1.580JC2 Arachis hypogaea HOM05D005908 ORTHO05D007235 8.0e-71 271.6 287 50.9
Lj2g0007665 Lotus japonicus HOM05D005908 ORTHO05D007235 1.0e-70 271.2 271 51.7
THA.LOC104811995 Tarenaya hassleriana HOM05D005908 ORTHO05D007235 2.3e-70 270.0 289 49.8
Lj2g0024281 Lotus japonicus HOM05D005908 ORTHO05D007235 2.0e-69 266.9 271 51.7
Hund04705 Selenicereus undatus HOM05D005908 ORTHO05D007235 2.0e-69 266.9 265 52.1
CARHR265040 Cardamine hirsuta HOM05D005908 ORTHO05D007235 9.8e-69 264.6 308 47.7
Ah.13g068320 Amaranthus hybridus HOM05D005908 ORTHO05D007235 1.7e-68 263.8 272 50.7
ATR0757G107 Amborella trichopoda HOM05D005908 ORTHO05D007235 2.9e-68 263.1 222 56.3
AUR62016029 Chenopodium quinoa HOM05D005908 ORTHO05D007235 6.4e-68 261.9 309 48.5
Hma1.2p1_0270F.1_g108420 Hydrangea macrophylla HOM05D005908 ORTHO05D007235 6.4e-68 261.9 324 49.4
Prupe.1G077000 Prunus persica HOM05D005908 ORTHO05D007235 1.6e-66 257.3 315 46.3
AL8G26480 Arabidopsis lyrata HOM05D005908 ORTHO05D007235 2.0e-66 256.9 293 47.8
AT5G52110 Arabidopsis thaliana HOM05D005908 ORTHO05D007235 2.7e-66 256.5 306 46.1
Nitab4.5_0005024g0020 Nicotiana tabacum HOM05D005908 ORTHO05D007235 2.7e-66 256.5 294 49.7
Aa31LG3G8480 Aethionema arabicum HOM05D005908 ORTHO05D007235 3.5e-66 256.1 264 50.0
BcaB01g04184 Brassica carinata HOM05D005908 ORTHO05D007235 7.8e-66 255.0 274 48.5
Sc25g0000390 Simmondsia chinensis HOM05D005908 ORTHO05D007235 1.0e-65 254.6 268 50.4
Thhalv10014339m.g Eutrema salsugineum HOM05D005908 ORTHO05D007235 1.7e-65 253.8 306 45.8
Zm00001eb021390 Zea mays HOM05D005908 ORTHO05D007235 3.9e-65 252.7 279 46.2
Sp6g14360 Schrenkiella parvula HOM05D005908 ORTHO05D007235 5.0e-65 252.3 306 46.1
SpUn0060_0050 Schrenkiella parvula HOM05D005908 ORTHO05D007235 5.0e-65 252.3 306 46.1
Carub.0008s1219 Capsella rubella HOM05D005908 ORTHO05D007235 6.6e-65 251.9 265 49.1
Haze_13753 Corylus avellana HOM05D005908 ORTHO05D007235 1.1e-64 251.1 265 52.8
BraA03t10874Z Brassica rapa HOM05D005908 ORTHO05D007235 5.6e-64 248.8 269 47.2
A03p15840 Brassica napus HOM05D005908 ORTHO05D007235 7.3e-64 248.4 269 47.2
BcaC01g06164 Brassica carinata HOM05D005908 ORTHO05D007235 3.6e-63 246.1 269 46.8
C03p18500 Brassica napus HOM05D005908 ORTHO05D007235 3.6e-63 246.1 269 46.8
BolC3t14247H Brassica oleracea HOM05D005908 ORTHO05D007235 3.6e-63 246.1 269 46.8
CDE11G0458 Ceratophyllum demersum HOM05D003547 ORTHO05D004236 6.2e-63 245.4 333 42.9
HPP92_001363 Vanilla planifolia HOM05D005908 ORTHO05D007235 8.0e-63 245.0 269 49.4
Peaxi162Scf00915g00250 Petunia axillaris HOM05D005908 ORTHO05D007235 3.2e-59 233.0 316 47.2
Gohir.A09G040000 Gossypium hirsutum HOM05D005908 ORTHO05D007235 5.4e-59 232.3 222 56.3
AUR62021234 Chenopodium quinoa HOM05D005908 ORTHO05D007235 1.3e-57 227.6 274 47.8
Phvul.004G121600 Phaseolus vulgaris HOM05D005908 ORTHO05D007235 2.3e-57 226.9 204 55.9
unitig_37.g11958 Utricularia gibba HOM05D005908 ORTHO05D007235 1.6e-55 220.7 185 58.9
EL10Ac3g05695 Beta vulgaris HOM05D005908 ORTHO05D007235 1.7e-52 210.7 221 51.6
MELO3C006877.2 Cucumis melo HOM05D005908 ORTHO05D007235 5.1e-49 199.1 274 43.4
vmacro06721 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 8.6e-49 198.4 289 42.6
SEGI_20513 Sequoiadendron giganteum HOM05D005908 ORTHO05D007235 8.9e-46 188.3 234 44.9
HPP92_001354 Vanilla planifolia HOM05D005908 ORTHO05D007235 1.5e-40 171.0 268 39.9
Mapoly0051s0108 Marchantia polymorpha HOM05D005908 ORTHO05D007235 8.4e-36 155.2 228 39.9
CSS0026196 Camellia sinensis var. sinensis HOM05D005908 ORTHO05D007235 1.2e-34 151.4 101 65.3
CSS0048064 Camellia sinensis var. sinensis HOM05D005908 ORTHO05D007235 1.2e-34 151.4 101 65.3
AagrBONN_evm.TU.Sc2ySwM_228.723 Anthoceros agrestis HOM05D005908 ORTHO05D007235 4.3e-32 142.9 223 35.9
Pp3c13_15400 Physcomitrium patens HOM05D005908 ORTHO05D007235 2.1e-31 140.6 224 36.6
FAN03G3234 Fragaria x ananassa HOM05D005908 ORTHO05D007235 3.4e-29 133.3 166 45.8
Lsat_1_v5_gn_2_133160 Lactuca sativa HOM05D005908 ORTHO05D007235 4.9e-28 129.4 157 47.1
FAN03G2347 Fragaria x ananassa HOM05D005908 ORTHO05D007235 8.4e-28 128.6 174 43.7
Actinidia34081 Actinidia chinensis HOM05D005908 ORTHO05D007235 5.6e-24 115.9 143 45.5
SMO364G0827 Selaginella moellendorffii HOM05D005908 ORTHO05D007235 5.6e-24 115.9 224 33.0
CSS0007682 Camellia sinensis var. sinensis HOM05D005908 ORTHO05D007235 1.8e-22 110.9 136 48.5
Dinv28477 Davidia involucrata HOM05D005908 ORTHO05D007235 1.5e-21 107.8 112 56.2
SEGI_01877 Sequoiadendron giganteum HOM05D005908 ORTHO05D007235 9.9e-21 105.1 122 50.8
MCO01G567 Micromonas commoda HOM05D005908 ORTHO05D007235 6.0e-18 95.9 235 29.4
SMO353G0077 Selaginella moellendorffii HOM05D005908 ORTHO05D007235 1.3e-17 94.7 229 31.4
Cre12.g537850 Chlamydomonas reinhardtii HOM05D005908 ORTHO05D007235 6.7e-17 92.4 247 29.6
FAN01G0300 Fragaria x ananassa HOM05D005908 ORTHO05D007235 5.6e-16 89.4 124 40.3
MD16G1250200 Malus domestica HOM05D005908 ORTHO05D007235 8.1e-15 85.5 76 55.3
CBR_g58789 Chara braunii HOM05D005908 ORTHO05D007235 6.9e-14 82.4 277 27.4
FvH4_7g29023 Fragaria vesca HOM05D005908 ORTHO05D007235 1.1e-08 65.1 63 52.4
MELO3C031805.2 Cucumis melo HOM05D005908 ORTHO05D007235 1.9e-08 64.3 64 50.0
MD12G1162900 Malus domestica HOM05D000067 ORTHO05D000097 9.6e-08 62.0 44 68.2
Hma1.2p1_0010F.1_g006900 Hydrangea macrophylla HOM05D005908 ORTHO05D007235 2.4e-06 57.4 57 52.6


User provided reference genes

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