Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold29G12276 Striga asiatica HOM05D005156 ORTHO05D006710 1.6e-118 429.5 223 100.0
Migut.D00644 Erythranthe guttata HOM05D005156 ORTHO05D006710 9.7e-100 367.1 221 85.5
CSS0001612 Camellia sinensis var. sinensis HOM05D005156 ORTHO05D006710 3.7e-99 365.2 213 87.3
MD11G1196200 Malus domestica HOM05D005156 ORTHO05D006710 3.7e-99 365.2 215 86.0
CSS0030488 Camellia sinensis var. sinensis HOM05D005156 ORTHO05D006710 4.8e-99 364.8 213 86.9
MSTRG.18451 Avicennia marina HOM05D005156 ORTHO05D006710 1.4e-98 363.2 213 87.8
Cfa009832 Carpinus fangiana HOM05D005156 ORTHO05D006710 1.6e-97 359.8 215 85.6
Hma1.2p1_1115F.1_g258845 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 2.6e-97 359.0 215 84.7
CiPaw.13G153000 Carya illinoinensis HOM05D005156 ORTHO05D006710 3.5e-97 358.6 211 85.3
Atru.chr3.2617 Acer truncatum HOM05D005156 ORTHO05D006710 4.5e-97 358.2 212 86.3
RcHm_v2.0_Chr5g0050911 Rosa chinensis HOM05D005156 ORTHO05D006710 5.9e-97 357.8 215 83.7
Actinidia16358 Actinidia chinensis HOM05D005156 ORTHO05D006710 1.0e-96 357.1 215 84.7
Ciclev10015838m.g Citrus clementina HOM05D005156 ORTHO05D006710 3.8e-96 355.1 212 85.4
GSVIVG01037376001 Vitis vinifera HOM05D005156 ORTHO05D006710 5.0e-96 354.8 211 85.8
Lj3g0017854 Lotus japonicus HOM05D005156 ORTHO05D006710 6.5e-96 354.4 223 83.4
Eucgr.J00726 Eucalyptus grandis HOM05D005156 ORTHO05D006710 2.5e-95 352.4 213 83.6
Potri.001G254000 Populus trichocarpa HOM05D005156 ORTHO05D006710 2.5e-95 352.4 213 84.5
Lalb_Chr10g0094741 Lupinus albus HOM05D005156 ORTHO05D006710 3.2e-95 352.1 211 85.3
Sc16g0011170 Simmondsia chinensis HOM05D005156 ORTHO05D006710 7.2e-95 350.9 213 83.1
FAN16G2156 Fragaria x ananassa HOM05D005156 ORTHO05D006710 9.4e-95 350.5 212 82.1
Cc01_g05890 Coffea canephora HOM05D005156 ORTHO05D006710 1.2e-94 350.1 213 83.6
PSO210G1653 Papaver somniferum HOM05D005156 ORTHO05D006710 1.2e-94 350.1 214 83.2
Thecc.09G243300 Theobroma cacao HOM05D005156 ORTHO05D006710 1.2e-94 350.1 211 84.4
Gorai.001G136000 Gossypium raimondii HOM05D005156 ORTHO05D006710 1.6e-94 349.7 211 84.8
TAR626G1548 Trochodendron aralioides HOM05D005156 ORTHO05D006710 1.6e-94 349.7 214 82.7
Oeu001490.1 Olea europaea HOM05D005156 ORTHO05D006710 2.7e-94 349.0 211 84.4
Prupe.4G258300 Prunus persica HOM05D005156 ORTHO05D006710 3.6e-94 348.6 215 82.8
QL01p017825 Quercus lobata HOM05D005156 ORTHO05D006710 3.6e-94 348.6 208 84.6
ClCG03G012920 Citrullus lanatus HOM05D005156 ORTHO05D006710 4.7e-94 348.2 214 82.2
Gohir.D07G126000 Gossypium hirsutum HOM05D005156 ORTHO05D006710 6.1e-94 347.8 211 84.4
Gohir.A07G121700 Gossypium hirsutum HOM05D005156 ORTHO05D006710 8.0e-94 347.4 211 84.4
MELO3C015153.2 Cucumis melo HOM05D005156 ORTHO05D006710 1.4e-93 346.7 221 80.1
CsaV3_1G043140 Cucumis sativus L. HOM05D005156 ORTHO05D006710 1.4e-93 346.7 221 80.1
PSO210G0499 Papaver somniferum HOM05D005156 ORTHO05D006710 2.3e-93 345.9 214 82.2
A05p20090 Brassica napus HOM05D005156 ORTHO05D006710 6.7e-93 344.4 217 80.6
BraA05t20917Z Brassica rapa HOM05D005156 ORTHO05D006710 6.7e-93 344.4 217 80.6
FvH4_3g28170 Fragaria vesca HOM05D005156 ORTHO05D006710 6.7e-93 344.4 212 81.6
Aqoxy8s002 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 8.8e-93 344.0 213 82.6
AL1G58170 Arabidopsis lyrata HOM05D005156 ORTHO05D006710 3.3e-92 342.0 214 81.8
C05p33580 Brassica napus HOM05D005156 ORTHO05D006710 3.3e-92 342.0 217 79.7
CANSAT54G2883 Cannabis sativa HOM05D005156 ORTHO05D006710 4.4e-92 341.7 215 81.9
Glyma.09G002700 Glycine max HOM05D005156 ORTHO05D006710 4.4e-92 341.7 211 83.4
CARHR040540 Cardamine hirsuta HOM05D005156 ORTHO05D006710 5.7e-92 341.3 214 81.3
BcaC05g27410 Brassica carinata HOM05D005156 ORTHO05D006710 9.7e-92 340.5 214 81.3
BraA06t23519Z Brassica rapa HOM05D005156 ORTHO05D006710 9.7e-92 340.5 220 78.6
Carub.0001s3958 Capsella rubella HOM05D005156 ORTHO05D006710 9.7e-92 340.5 214 82.2
BolC5t32085H Brassica oleracea HOM05D005156 ORTHO05D006710 1.3e-91 340.1 213 80.8
A06p03060 Brassica napus HOM05D005156 ORTHO05D006710 1.7e-91 339.7 220 78.6
PGR119G1881 Punica granatum HOM05D005156 ORTHO05D006710 2.2e-91 339.3 218 78.9
C06p05700 Brassica napus HOM05D005156 ORTHO05D006710 2.8e-91 339.0 213 80.8
Haze_23195 Corylus avellana HOM05D005156 ORTHO05D006710 2.8e-91 339.0 198 87.4
AT1G50510 Arabidopsis thaliana HOM05D005156 ORTHO05D006710 4.8e-91 338.2 214 81.3
Cpa.g.sc84.13 Carica papaya HOM05D005156 ORTHO05D006710 4.8e-91 338.2 211 81.5
Sabra16G0154700 Salix brachista HOM05D005156 ORTHO05D006710 6.3e-91 337.8 208 84.1
BcaC08g43222 Brassica carinata HOM05D005156 ORTHO05D006710 8.2e-91 337.4 214 79.9
Ah.06g194400 Amaranthus hybridus HOM05D005156 ORTHO05D006710 1.4e-90 336.7 211 81.5
ECA238G2265 Erigeron canadensis HOM05D005156 ORTHO05D006710 1.4e-90 336.7 211 81.0
Thhalv10011639m.g Eutrema salsugineum HOM05D005156 ORTHO05D006710 1.4e-90 336.7 214 80.4
BcaB02g11155 Brassica carinata HOM05D005156 ORTHO05D006710 2.4e-90 335.9 214 79.4
THA.LOC104804468 Tarenaya hassleriana HOM05D005156 ORTHO05D006710 2.4e-90 335.9 214 80.4
VMungo1383G1089 Vigna mungo HOM05D005156 ORTHO05D006710 2.4e-90 335.9 215 81.4
BcaB07g33488 Brassica carinata HOM05D005156 ORTHO05D006710 5.3e-90 334.7 214 79.9
Phvul.011G080400 Phaseolus vulgaris HOM05D005156 ORTHO05D006710 5.3e-90 334.7 213 80.8
TPR.G34160 Trifolium pratense HOM05D005156 ORTHO05D006710 9.1e-90 334.0 211 81.0
Rhsim13G0216600 Rhododendron simsii HOM05D005156 ORTHO05D006710 3.5e-89 332.0 198 85.9
unitig_90.g27461 Utricularia gibba HOM05D005156 ORTHO05D006710 3.5e-89 332.0 209 83.3
Aa31LG10G3780 Aethionema arabicum HOM05D005156 ORTHO05D006710 5.9e-89 331.3 211 78.7
Sp1g37360 Schrenkiella parvula HOM05D005156 ORTHO05D006710 1.0e-88 330.5 211 78.2
AUR62000172 Chenopodium quinoa HOM05D005156 ORTHO05D006710 1.3e-88 330.1 213 80.8
HanXRQChr06g0183211 Helianthus annuus HOM05D005156 ORTHO05D006710 1.3e-88 330.1 211 80.1
Psat7g227760 Pisum sativum HOM05D005156 ORTHO05D006710 1.3e-88 330.1 211 80.1
EL10Ac4g10175 Beta vulgaris HOM05D005156 ORTHO05D006710 2.2e-88 329.3 213 80.3
MBI15_g27827_MAGBIO Magnolia biondii HOM05D005156 ORTHO05D006710 2.9e-88 328.9 198 83.8
Peaxi162Scf00473g00218 Petunia axillaris HOM05D005156 ORTHO05D006710 6.5e-88 327.8 211 80.6
Hund21990 Selenicereus undatus HOM05D005156 ORTHO05D006710 1.5e-87 326.6 213 79.8
vmacro04002 Vaccinium macrocarpon HOM05D005156 ORTHO05D006710 3.2e-87 325.5 194 86.1
arahy.Tifrunner.gnm1.ann1.KCM926 Arachis hypogaea HOM05D005156 ORTHO05D006710 4.2e-87 325.1 194 86.6
ATR0751G133 Amborella trichopoda HOM05D005156 ORTHO05D006710 9.4e-87 323.9 226 76.5
arahy.Tifrunner.gnm1.ann1.9TL5ZW Arachis hypogaea HOM05D005156 ORTHO05D006710 1.2e-86 323.6 194 85.6
CAN.G1323.2 Capsicum annuum HOM05D005156 ORTHO05D006710 1.2e-86 323.6 213 77.5
PGSC0003DMG400019760 Solanum tuberosum HOM05D005156 ORTHO05D006710 1.2e-86 323.6 213 77.5
Lj2C655T2 Lonicera japonica HOM05D005156 ORTHO05D006710 1.6e-86 323.2 194 85.6
Nitab4.5_0006419g0030 Nicotiana tabacum HOM05D005156 ORTHO05D006710 2.1e-86 322.8 211 78.7
Solyc11g033260.2 Solanum lycopersicum HOM05D005156 ORTHO05D006710 2.7e-86 322.4 213 77.0
Sopen11g015730 Solanum pennellii HOM05D005156 ORTHO05D006710 2.7e-86 322.4 213 77.0
Lsat_1_v5_gn_2_29420 Lactuca sativa HOM05D005156 ORTHO05D006710 4.7e-86 321.6 202 81.2
Os08g0504400 Oryza sativa ssp. japonica HOM05D005156 ORTHO05D006710 8.0e-86 320.9 217 76.5
HPP92_001936 Vanilla planifolia HOM05D005156 ORTHO05D006710 2.3e-85 319.3 213 76.5
Ca_12758_v3 Cicer arietinum L. HOM05D005156 ORTHO05D006710 3.0e-85 318.9 207 81.6
Medtr4g031220 Medicago truncatula HOM05D005156 ORTHO05D006710 5.2e-85 318.2 195 83.6
Sed0002302 Sechium edule HOM05D005156 ORTHO05D006710 1.2e-84 317.0 219 76.3
Aqoxy4G00402 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 1.7e-83 313.2 189 84.1
AUR62039839 Chenopodium quinoa HOM05D005156 ORTHO05D006710 1.7e-83 313.2 243 70.8
Manes.15G112800 Manihot esculenta HOM05D005156 ORTHO05D006710 1.7e-83 313.2 183 86.3
Zm00001eb251060 Zea mays HOM05D005156 ORTHO05D006710 2.2e-83 312.8 218 72.9
FAN25G0057 Fragaria x ananassa HOM05D005156 ORTHO05D006710 6.3e-83 311.2 212 75.0
FAN21G2369 Fragaria x ananassa HOM05D005156 ORTHO05D006710 1.4e-82 310.1 212 74.5
FAN11G0102 Fragaria x ananassa HOM05D005156 ORTHO05D006710 8.5e-80 300.8 212 73.1
SMO147G0151 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 8.5e-80 300.8 214 72.9
Pp3c21_8650 Physcomitrium patens HOM05D005156 ORTHO05D006710 4.0e-77 292.0 217 69.6
Mapoly0048s0046 Marchantia polymorpha HOM05D005156 ORTHO05D006710 2.0e-76 289.7 208 72.1
Nitab4.5_0002113g0190 Nicotiana tabacum HOM05D005156 ORTHO05D006710 6.3e-75 284.6 183 79.8
CDE12G0606 Ceratophyllum demersum HOM05D005156 ORTHO05D006710 2.4e-74 282.7 176 83.0
SHI21395 Sapria himalayana HOM05D005156 ORTHO05D006710 4.1e-74 282.0 182 77.5
CBR_g12801 Chara braunii HOM05D005156 ORTHO05D006710 1.2e-73 280.4 211 69.7
DCAR_002091 Daucus carota HOM05D005156 ORTHO05D006710 4.5e-73 278.5 240 65.0
BcaB02g11038 Brassica carinata HOM05D005156 ORTHO05D006710 6.1e-70 268.1 172 80.2
AagrBONN_evm.TU.Sc2ySwM_368.760 Anthoceros agrestis HOM05D005156 ORTHO05D006710 2.3e-69 266.2 211 67.8
MCO15G168 Micromonas commoda HOM05D005156 ORTHO05D006710 4.0e-69 265.4 213 62.9
PRCOL_00003626 Prasinoderma coloniale HOM05D005156 ORTHO05D006710 1.3e-67 260.4 212 63.7
Dinv22149 Davidia involucrata HOM05D005156 ORTHO05D006710 2.4e-66 256.1 152 84.9
Lj2C684T3 Lonicera japonica HOM05D005156 ORTHO05D006710 1.2e-65 253.8 143 89.5
BcaB01g01392 Brassica carinata HOM05D005156 ORTHO05D006710 1.6e-65 253.4 172 77.3
Cre02.g144000 Chlamydomonas reinhardtii HOM05D005156 ORTHO05D006710 1.2e-57 227.3 184 62.5
Hma1.2p1_2309F.1_g319520 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 1.6e-49 200.3 119 84.0
Cfa025164 Carpinus fangiana HOM05D005156 ORTHO05D006710 3.3e-47 192.6 215 46.5
Nn1g08053 Nelumbo nucifera HOM05D005156 ORTHO05D006710 2.8e-46 189.5 117 83.8
COL.COLO4_04116 Corchorus olitorius HOM05D005156 ORTHO05D006710 5.8e-44 181.8 113 81.4
SMO273G0012 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 1.4e-42 177.2 118 78.0
Haze_26247 Corylus avellana HOM05D005156 ORTHO05D006710 3.3e-39 166.0 230 44.8
Nn1g08054 Nelumbo nucifera HOM05D005156 ORTHO05D006710 4.8e-30 135.6 78 84.6
Oeu016690.1 Olea europaea HOM05D005156 ORTHO05D006710 8.4e-27 124.8 99 65.7
ATR0585G005 Amborella trichopoda HOM05D005156 ORTHO05D006710 6.0e-25 118.6 90 68.9
Aqoxy1G04277 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 8.7e-24 114.8 70 80.0
SMO164G0249 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 6.2e-22 108.6 118 56.8
MELO3C033715.2 Cucumis melo HOM05D005156 ORTHO05D006710 5.8e-20 102.1 61 82.0
MELO3C034160.2 Cucumis melo HOM05D005156 ORTHO05D006710 5.8e-20 102.1 62 82.3
MELO3C030656.2 Cucumis melo HOM05D005156 ORTHO05D006710 9.9e-20 101.3 62 83.9
MELO3C034654.2 Cucumis melo HOM05D005156 ORTHO05D006710 2.2e-19 100.1 62 83.9
SEGI_37101 Sequoiadendron giganteum HOM05D005156 ORTHO05D006710 2.7e-17 93.2 64 68.8
MELO3C030457.2 Cucumis melo HOM05D005156 ORTHO05D006710 6.0e-17 92.0 58 82.8
MELO3C016526.2 Cucumis melo HOM05D005156 ORTHO05D006710 1.3e-16 90.9 55 85.5
EL10Ac2g04378 Beta vulgaris HOM05D005156 ORTHO05D006710 1.8e-13 80.5 72 52.8
EL10Ac3g06833 Beta vulgaris HOM05D005156 ORTHO05D006710 1.8e-13 80.5 72 52.8
SMO147G0118 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 9.0e-13 78.2 159 39.0
Hma1.2p1_1115F.1_g258870 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 6.5e-11 72.0 88 45.5
EL10Ac2g02892 Beta vulgaris HOM05D005156 ORTHO05D039042 7.1e-10 68.6 42 78.6
EL10As2g23197 Beta vulgaris HOM05D005156 ORTHO05D039042 6.0e-09 65.5 40 80.0
Rhsim05G0077000 Rhododendron simsii HOM05D003003 ORTHO05D008343 6.0e-09 65.5 40 82.5
EL10Ac8g20129 Beta vulgaris HOM05D005156 ORTHO05D000004 1.0e-08 64.7 35 88.6
EL10Ac9g22728 Beta vulgaris HOM05D005156 ORTHO05D000004 1.0e-08 64.7 35 88.6
Rhsim07G0166700 Rhododendron simsii HOM05D005156 ORTHO05D050672 6.3e-06 55.5 64 51.6


User provided reference genes

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