Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold296G47554 Striga asiatica HOM05D006185 ORTHO05D007572 2.1e-108 395.6 188 100.0
SalBow5G0266 Salvia bowleyana HOM05D006185 ORTHO05D007572 1.1e-91 340.1 187 83.4
Migut.L01579 Erythranthe guttata HOM05D006185 ORTHO05D007572 2.6e-90 335.5 186 81.7
Nitab4.5_0004234g0030 Nicotiana tabacum HOM05D006185 ORTHO05D007572 2.1e-87 325.9 187 79.7
Nitab4.5_0000073g0300 Nicotiana tabacum HOM05D006185 ORTHO05D007572 6.1e-87 324.3 187 79.1
Peaxi162Scf00928g00132 Petunia axillaris HOM05D006185 ORTHO05D007572 6.7e-86 320.9 187 77.0
CAN.G1661.20 Capsicum annuum HOM05D006185 ORTHO05D007572 1.5e-85 319.7 187 77.5
Solyc12g009180.2 Solanum lycopersicum HOM05D006185 ORTHO05D007572 2.6e-85 318.9 186 79.0
Sopen12g004130 Solanum pennellii HOM05D006185 ORTHO05D007572 2.6e-85 318.9 186 78.5
PGSC0003DMG400002903 Solanum tuberosum HOM05D006185 ORTHO05D007572 1.3e-84 316.6 186 78.0
Oeu062247.1 Olea europaea HOM05D006185 ORTHO05D007572 1.1e-83 313.5 187 75.9
ClCG03G014940 Citrullus lanatus HOM05D006185 ORTHO05D007572 1.2e-82 310.1 183 77.0
Cc06_g12450 Coffea canephora HOM05D006185 ORTHO05D007572 1.2e-82 310.1 182 76.4
CsaV3_1G041210 Cucumis sativus L. HOM05D006185 ORTHO05D007572 1.2e-82 310.1 185 76.2
Gohir.A05G034500 Gossypium hirsutum HOM05D006185 ORTHO05D007572 4.5e-82 308.1 187 75.4
CANSAT56G1413 Cannabis sativa HOM05D006185 ORTHO05D007572 5.9e-82 307.8 187 75.4
Gohir.D05G035900 Gossypium hirsutum HOM05D006185 ORTHO05D007572 3.8e-81 305.1 187 74.9
Gorai.009G036500 Gossypium raimondii HOM05D006185 ORTHO05D007572 3.8e-81 305.1 187 74.9
Rhsim05G0005100 Rhododendron simsii HOM05D006185 ORTHO05D007572 8.5e-81 303.9 188 76.1
Atru.chr7.1733 Acer truncatum HOM05D006185 ORTHO05D007572 1.1e-80 303.5 187 73.3
CSS0028340 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 1.1e-80 303.5 188 73.4
CSS0016181 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 1.5e-80 303.1 188 73.4
vmacro17122 Vaccinium macrocarpon HOM05D006185 ORTHO05D007572 1.9e-80 302.8 187 73.3
CANSAT56G0026 Cannabis sativa HOM05D006185 ORTHO05D007572 2.5e-80 302.4 187 74.3
CANSAT56G1917 Cannabis sativa HOM05D006185 ORTHO05D007572 2.5e-80 302.4 188 75.0
Dinv25540 Davidia involucrata HOM05D006185 ORTHO05D007572 2.5e-80 302.4 187 73.8
TWI63G0883 Tripterygium wilfordii HOM05D006185 ORTHO05D007572 7.2e-80 300.8 184 75.5
CANSAT56G3530 Cannabis sativa HOM05D006185 ORTHO05D007572 9.4e-80 300.4 188 74.5
Manes.03G041800 Manihot esculenta HOM05D006185 ORTHO05D007572 9.4e-80 300.4 187 73.8
ECA236G4868 Erigeron canadensis HOM05D006185 ORTHO05D007572 1.6e-79 299.7 187 71.1
COL.COLO4_18072 Corchorus olitorius HOM05D006185 ORTHO05D007572 3.6e-79 298.5 187 73.8
Duzib150G0101 Durio zibethinus HOM05D006185 ORTHO05D007572 8.0e-79 297.4 187 72.7
Lsat_1_v5_gn_8_85701 Lactuca sativa HOM05D006185 ORTHO05D007572 8.0e-79 297.4 189 71.4
Eucgr.C03305 Eucalyptus grandis HOM05D006185 ORTHO05D007572 1.0e-78 297.0 186 71.5
unitig_699.g19263 Utricularia gibba HOM05D000454 ORTHO05D007572 1.0e-78 297.0 182 75.8
CiPaw.03G203800 Carya illinoinensis HOM05D006185 ORTHO05D007572 1.8e-78 296.2 187 73.8
Lj7A688T82 Lonicera japonica HOM05D006185 ORTHO05D007572 4.0e-78 295.0 187 72.7
Cpa.g.sc28.15 Carica papaya HOM05D006185 ORTHO05D007572 5.2e-78 294.7 187 71.1
Potri.006G140000 Populus trichocarpa HOM05D006185 ORTHO05D007572 8.8e-78 293.9 186 73.7
EL10Ac8g19027 Beta vulgaris HOM05D006185 ORTHO05D007572 1.2e-77 293.5 183 75.4
HanXRQChr04g0125931 Helianthus annuus HOM05D006185 ORTHO05D007572 1.2e-77 293.5 188 70.2
Hund26074 Selenicereus undatus HOM05D006185 ORTHO05D007572 1.5e-77 293.1 186 73.7
MELO3C015534.2 Cucumis melo HOM05D006185 ORTHO05D007572 2.0e-77 292.7 202 68.8
GSVIVG01015050001 Vitis vinifera HOM05D006185 ORTHO05D007572 2.0e-77 292.7 186 72.0
Ah.09g229250 Amaranthus hybridus HOM05D006185 ORTHO05D007572 2.6e-77 292.4 186 73.7
Duzib187G0940 Durio zibethinus HOM05D006185 ORTHO05D007572 2.6e-77 292.4 187 71.7
Psat7g057800 Pisum sativum HOM05D006185 ORTHO05D007572 2.6e-77 292.4 188 70.7
Thecc.09G074200 Theobroma cacao HOM05D006185 ORTHO05D007572 1.3e-76 290.0 187 72.7
Haze_26036 Corylus avellana HOM05D006185 ORTHO05D007572 2.2e-76 289.3 187 71.7
QL11p001224 Quercus lobata HOM05D006185 ORTHO05D007572 2.2e-76 289.3 186 72.6
Cfa002967 Carpinus fangiana HOM05D006185 ORTHO05D007572 3.7e-76 288.5 186 71.0
Lj4g0025093 Lotus japonicus HOM05D006185 ORTHO05D007572 3.7e-76 288.5 188 72.3
Sc06g0006920 Simmondsia chinensis HOM05D006185 ORTHO05D007572 4.8e-76 288.1 184 73.4
Gorai.010G090200 Gossypium raimondii HOM05D006185 ORTHO05D007572 1.1e-75 287.0 183 73.2
Actinidia30236 Actinidia chinensis HOM05D006185 ORTHO05D007572 1.8e-75 286.2 226 61.5
DCAR_010492 Daucus carota HOM05D006185 ORTHO05D007572 1.8e-75 286.2 183 70.5
Ciclev10009607m.g Citrus clementina HOM05D006185 ORTHO05D007572 2.4e-75 285.8 187 71.1
FAN26G0065 Fragaria x ananassa HOM05D006185 ORTHO05D007572 5.3e-75 284.6 186 69.4
FAN26G3397 Fragaria x ananassa HOM05D006185 ORTHO05D007572 5.3e-75 284.6 186 69.4
Prupe.7G195700 Prunus persica HOM05D006185 ORTHO05D007572 9.1e-75 283.9 186 68.8
Ca_09309_v3 Cicer arietinum L. HOM05D006185 ORTHO05D007572 1.2e-74 283.5 187 70.1
AT1G19130 Arabidopsis thaliana HOM05D006185 ORTHO05D007572 4.5e-74 281.6 187 69.5
MD02G1095400 Malus domestica HOM05D006185 ORTHO05D007572 4.5e-74 281.6 186 72.0
RcHm_v2.0_Chr2g0095441 Rosa chinensis HOM05D006185 ORTHO05D007572 4.5e-74 281.6 186 68.8
Phvul.003G129600 Phaseolus vulgaris HOM05D006185 ORTHO05D007572 5.9e-74 281.2 189 68.8
PGR044G1997 Punica granatum HOM05D006185 ORTHO05D007572 5.9e-74 281.2 186 69.4
FvH4_1g09020 Fragaria vesca HOM05D006185 ORTHO05D007572 7.7e-74 280.8 186 68.8
FAN19G1369 Fragaria x ananassa HOM05D006185 ORTHO05D007572 7.7e-74 280.8 186 68.8
THA.LOC104799837 Tarenaya hassleriana HOM05D006185 ORTHO05D007572 1.0e-73 280.4 184 67.9
AL1G31710 Arabidopsis lyrata HOM05D006185 ORTHO05D007572 1.3e-73 280.0 187 69.5
Aa31LG7G3870 Aethionema arabicum HOM05D006185 ORTHO05D007572 1.7e-73 279.6 187 68.4
Glyma.13G111600 Glycine max HOM05D006185 ORTHO05D007572 1.7e-73 279.6 193 68.4
TPR.G12562 Trifolium pratense HOM05D006185 ORTHO05D007572 3.8e-73 278.5 187 70.1
Thhalv10008865m.g Eutrema salsugineum HOM05D006185 ORTHO05D007572 5.0e-73 278.1 186 68.8
VMungo1215G2404 Vigna mungo HOM05D006185 ORTHO05D007572 6.5e-73 277.7 189 68.8
FAN23G1580 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.5e-72 276.6 186 67.7
Carub.0001s1876 Capsella rubella HOM05D006185 ORTHO05D007572 4.2e-72 275.0 187 67.4
Medtr4g125100 Medicago truncatula HOM05D006185 ORTHO05D007572 5.5e-72 274.6 188 69.1
BraA08t34935Z Brassica rapa HOM05D006185 ORTHO05D007572 8.0e-71 270.8 187 65.8
A08p30000 Brassica napus HOM05D006185 ORTHO05D007572 1.0e-70 270.4 187 65.8
Lalb_Chr07g0181271 Lupinus albus HOM05D006185 ORTHO05D007572 1.0e-70 270.4 187 67.4
BcaC07g38980 Brassica carinata HOM05D006185 ORTHO05D007572 1.4e-70 270.0 187 65.8
Sabra06G0109300 Salix brachista HOM05D006185 ORTHO05D007572 1.4e-70 270.0 213 62.0
HanXRQChr06g0168681 Helianthus annuus HOM05D006185 ORTHO05D007572 2.3e-70 269.2 182 67.0
C08p19220 Brassica napus HOM05D006185 ORTHO05D007572 4.0e-70 268.5 187 65.2
BolC8t49541H Brassica oleracea HOM05D006185 ORTHO05D007572 4.0e-70 268.5 187 65.2
BcaB03g12935 Brassica carinata HOM05D006185 ORTHO05D007572 5.2e-70 268.1 188 66.0
TAR624G1115 Trochodendron aralioides HOM05D006185 ORTHO05D007572 7.5e-69 264.2 184 67.9
Hund26091 Selenicereus undatus HOM05D006185 ORTHO05D007572 2.2e-68 262.7 183 66.7
Sc08g0009100 Simmondsia chinensis HOM05D006185 ORTHO05D007572 2.2e-68 262.7 183 65.0
Aqoxy7G04191 Aquilegia oxysepala HOM05D006185 ORTHO05D007572 9.1e-67 257.3 191 65.4
ECA236G2592 Erigeron canadensis HOM05D006185 ORTHO05D007572 9.1e-67 257.3 183 65.0
Lsat_1_v5_gn_8_85721 Lactuca sativa HOM05D006185 ORTHO05D007572 3.5e-66 255.4 184 64.7
AUR62028304 Chenopodium quinoa HOM05D006185 ORTHO05D007572 5.9e-66 254.6 183 63.9
Eucgr.C00790 Eucalyptus grandis HOM05D006185 ORTHO05D007572 1.3e-65 253.4 188 63.3
Nn6g35681 Nelumbo nucifera HOM05D006185 ORTHO05D007572 3.8e-65 251.9 188 63.8
EL10Ac8g18996 Beta vulgaris HOM05D006185 ORTHO05D007572 5.0e-65 251.5 182 63.7
AUR62025276 Chenopodium quinoa HOM05D006185 ORTHO05D007572 6.5e-65 251.1 145 78.6
AUR62028278 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.1e-64 250.4 183 66.1
MBI13_g00698_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 1.1e-64 250.4 189 64.6
AUR62025298 Chenopodium quinoa HOM05D006185 ORTHO05D007572 3.2e-64 248.8 187 62.0
ATR0006G060 Amborella trichopoda HOM05D006185 ORTHO05D007572 3.0e-62 242.3 188 63.3
Nn5g27974 Nelumbo nucifera HOM05D006185 ORTHO05D007572 5.2e-62 241.5 188 62.2
Sed0027040 Sechium edule HOM05D006185 ORTHO05D007572 3.7e-60 235.3 148 71.6
arahy.Tifrunner.gnm1.ann1.85MSRM Arachis hypogaea HOM05D006185 ORTHO05D007572 6.3e-60 234.6 188 61.2
arahy.Tifrunner.gnm1.ann1.Y0H2IU Arachis hypogaea HOM05D006185 ORTHO05D007572 1.1e-59 233.8 188 61.2
Os08g0455800 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 4.1e-59 231.9 184 59.8
Zm00001eb040490 Zea mays HOM05D006185 ORTHO05D007572 2.7e-58 229.2 184 59.8
Gohir.A06G078100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 3.5e-58 228.8 183 62.8
HPP92_004362 Vanilla planifolia HOM05D006185 ORTHO05D007572 1.3e-57 226.9 176 63.1
Lalb_Chr12g0200241 Lupinus albus HOM05D006185 ORTHO05D007572 3.8e-57 225.3 188 58.0
MBI19_g05291_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 2.5e-56 222.6 180 62.2
SEGI_13235 Sequoiadendron giganteum HOM05D006185 ORTHO05D007572 5.6e-56 221.5 189 59.3
Mapoly0007s0060 Marchantia polymorpha HOM05D006185 ORTHO05D007572 4.0e-54 215.3 180 58.3
Os06g0198500 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 3.4e-53 212.2 184 55.4
MBI13_g47248_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 2.2e-52 209.5 189 57.1
Gohir.D06G077100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 2.9e-52 209.1 132 72.7
SMO340G0144 Selaginella moellendorffii HOM05D006185 ORTHO05D007572 1.1e-51 207.2 176 56.8
Pp3c9_22400 Physcomitrium patens HOM05D006185 ORTHO05D007572 1.6e-50 203.4 178 53.4
MSTRG.26479 Avicennia marina HOM05D006185 ORTHO05D007572 2.8e-47 192.6 111 78.4
FAN28G1197 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.2e-31 140.6 83 73.5
CARHR019730 Cardamine hirsuta HOM05D006185 ORTHO05D007572 1.8e-30 136.7 79 79.7
Ah.14g084750 Amaranthus hybridus HOM05D006185 ORTHO05D007572 1.3e-28 130.6 110 53.6
MBI14_g46913_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 3.5e-26 122.5 98 61.2
Os06g0198600 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 5.1e-17 92.0 116 43.1
Eucgr.C00789 Eucalyptus grandis HOM05D006185 ORTHO05D007572 7.3e-16 88.2 95 46.3
BcaB02g10882 Brassica carinata HOM05D006185 ORTHO05D007572 1.1e-08 64.3 78 42.3


User provided reference genes

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