Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold28G11764 Striga asiatica HOM05D006238 ORTHO05D007458 2.3e-65 253.1 253 100.0
Lj1g0017158 Lotus japonicus HOM05D006238 ORTHO05D007458 8.3e-47 191.4 262 84.0
arahy.Tifrunner.gnm1.ann1.XMW6VU Arachis hypogaea HOM05D006238 ORTHO05D007458 1.4e-46 190.7 260 83.1
Medtr3g023830 Medicago truncatula HOM05D006238 ORTHO05D007458 4.5e-45 185.7 262 80.2
Glyma.06G201600 Glycine max HOM05D006238 ORTHO05D007458 1.7e-44 183.7 262 83.2
TPR.G12219 Trifolium pratense HOM05D006238 ORTHO05D007458 3.8e-44 182.6 262 81.3
Glyma.04G164100 Glycine max HOM05D006238 ORTHO05D007458 6.6e-44 181.8 262 81.3
Migut.L00004 Erythranthe guttata HOM05D006238 ORTHO05D007458 8.6e-44 181.4 262 84.0
Migut.I00441 Erythranthe guttata HOM05D006238 ORTHO05D007458 2.5e-43 179.9 262 83.6
Potri.015G048800 Populus trichocarpa HOM05D006238 ORTHO05D007458 2.5e-43 179.9 262 82.8
Lalb_Chr08g0238951 Lupinus albus HOM05D006238 ORTHO05D007458 5.6e-43 178.7 262 81.7
Ca_13804_v3 Cicer arietinum L. HOM05D006238 ORTHO05D007458 1.2e-42 177.6 262 81.3
MSTRG.22972 Avicennia marina HOM05D006238 ORTHO05D007458 8.9e-41 171.4 262 82.1
Actinidia35026 Actinidia chinensis HOM05D006238 ORTHO05D007458 2.0e-40 170.2 262 81.7
CSS0008812 Camellia sinensis var. sinensis HOM05D006238 ORTHO05D007458 7.5e-40 168.3 262 80.9
Nitab4.5_0001961g0050 Nicotiana tabacum HOM05D006238 ORTHO05D007458 7.5e-40 168.3 290 56.2
Sopen12g019730 Solanum pennellii HOM05D006238 ORTHO05D007458 9.8e-40 167.9 262 80.5
Oeu038367.1 Olea europaea HOM05D006238 ORTHO05D007458 3.7e-39 166.0 262 80.5
arahy.Tifrunner.gnm1.ann1.G7J9WL Arachis hypogaea HOM05D006238 ORTHO05D007458 1.1e-38 164.5 260 80.0
Cfa019307 Carpinus fangiana HOM05D006238 ORTHO05D007458 1.1e-38 164.5 262 80.2
CiPaw.11G050500 Carya illinoinensis HOM05D006238 ORTHO05D007458 1.1e-38 164.5 262 79.8
Haze_07689 Corylus avellana HOM05D006238 ORTHO05D007458 1.1e-38 164.5 262 80.2
Duzib205G0643 Durio zibethinus HOM05D006238 ORTHO05D007458 2.4e-38 163.3 262 79.8
Gohir.A09G243100 Gossypium hirsutum HOM05D006238 ORTHO05D007458 3.2e-38 162.9 262 79.8
Gohir.D09G243800 Gossypium hirsutum HOM05D006238 ORTHO05D007458 3.2e-38 162.9 262 79.8
Gorai.006G267600 Gossypium raimondii HOM05D006238 ORTHO05D007458 3.2e-38 162.9 262 79.8
RcHm_v2.0_Chr7g0182671 Rosa chinensis HOM05D006238 ORTHO05D007458 1.2e-37 161.0 260 80.4
Thecc.03G097700 Theobroma cacao HOM05D006238 ORTHO05D007458 2.0e-37 160.2 262 79.4
QL93p0191_0017 Quercus lobata HOM05D006238 ORTHO05D007458 3.5e-37 159.5 261 80.1
Prupe.5G201600 Prunus persica HOM05D006238 ORTHO05D007458 7.8e-37 158.3 260 80.0
QL10p018767 Quercus lobata HOM05D006238 ORTHO05D007458 7.8e-37 158.3 261 79.7
PGR044G1626 Punica granatum HOM05D006238 ORTHO05D007458 1.0e-36 157.9 262 79.4
GSVIVG01007912001 Vitis vinifera HOM05D006238 ORTHO05D007458 1.0e-36 157.9 260 80.0
FvH4_5g14250 Fragaria vesca HOM05D006238 ORTHO05D007458 3.9e-36 156.0 260 79.2
CANSAT80G2720 Cannabis sativa HOM05D006238 ORTHO05D007458 1.1e-35 154.5 262 78.2
Solyc12g040320.2 Solanum lycopersicum HOM05D006238 ORTHO05D007458 1.1e-35 154.5 262 78.6
MD14G1209200 Malus domestica HOM05D006238 ORTHO05D007458 1.5e-35 154.1 262 79.0
Hund02602 Selenicereus undatus HOM05D006238 ORTHO05D007458 2.5e-35 153.3 261 78.9
Lsat_1_v5_gn_4_110280 Lactuca sativa HOM05D006238 ORTHO05D007458 3.3e-35 152.9 262 79.0
Sed0022301 Sechium edule HOM05D006238 ORTHO05D007458 3.3e-35 152.9 262 78.2
TWI81G0503 Tripterygium wilfordii HOM05D006238 ORTHO05D007458 3.3e-35 152.9 262 77.9
Ciclev10021749m.g Citrus clementina HOM05D006238 ORTHO05D007458 2.1e-34 150.2 260 77.3
Eucgr.K02503 Eucalyptus grandis HOM05D006238 ORTHO05D007458 3.6e-34 149.4 262 75.6
Nn4g23380 Nelumbo nucifera HOM05D006238 ORTHO05D007458 3.6e-34 149.4 266 36.8
MELO3C017212.2 Cucumis melo HOM05D006238 ORTHO05D007458 4.7e-34 149.1 262 77.1
CsaV3_1G002770 Cucumis sativus L. HOM05D006238 ORTHO05D007458 4.7e-34 149.1 262 77.1
Psat5g211960 Pisum sativum HOM05D006238 ORTHO05D007458 4.7e-34 149.1 262 76.7
Atru.chr9.382 Acer truncatum HOM05D006238 ORTHO05D007458 1.1e-33 147.9 263 77.6
EL10Ac5g11104 Beta vulgaris HOM05D006238 ORTHO05D007458 1.4e-33 147.5 261 76.6
COL.COLO4_22216 Corchorus olitorius HOM05D006238 ORTHO05D007458 1.4e-33 147.5 262 78.2
ECA232G0231 Erigeron canadensis HOM05D000954 ORTHO05D000822 1.8e-33 147.1 263 78.3
ATR0064G078 Amborella trichopoda HOM05D006238 ORTHO05D007458 3.1e-33 146.4 261 77.0
Aqoxy3G00445 Aquilegia oxysepala HOM05D006238 ORTHO05D007458 4.0e-33 146.0 262 76.7
Nitab4.5_0004284g0060 Nicotiana tabacum HOM05D006238 ORTHO05D007458 4.0e-33 146.0 253 54.9
SalBow5G1318 Salvia bowleyana HOM05D006238 ORTHO05D007458 6.8e-33 145.2 328 42.1
Nitab4.5_0001410g0100 Nicotiana tabacum HOM05D006238 ORTHO05D007458 2.0e-32 143.7 260 78.1
PSO478G4259 Papaver somniferum HOM05D006238 ORTHO05D007458 2.0e-32 143.7 260 76.9
Gohir.A12G181100 Gossypium hirsutum HOM05D006238 ORTHO05D007458 2.6e-32 143.3 262 76.3
Peaxi162Scf00106g00109 Petunia axillaris HOM05D006238 ORTHO05D007458 4.4e-32 142.5 278 74.1
Sopen03g034410 Solanum pennellii HOM05D006238 ORTHO05D007458 4.4e-32 142.5 262 77.1
BraA02t04934Z Brassica rapa HOM05D006238 ORTHO05D007458 5.8e-32 142.1 262 76.0
ECA247G0665 Erigeron canadensis HOM05D000006 ORTHO05D007458 5.8e-32 142.1 258 78.3
PSO017G1619 Papaver somniferum HOM05D006238 ORTHO05D007458 5.8e-32 142.1 260 76.5
Sp6g35050 Schrenkiella parvula HOM05D006238 ORTHO05D007458 5.8e-32 142.1 261 75.9
BcaNung04721 Brassica carinata HOM05D006238 ORTHO05D007458 7.5e-32 141.7 262 76.0
C02p03310 Brassica napus HOM05D006238 ORTHO05D007458 7.5e-32 141.7 262 76.0
BolC2t06295H Brassica oleracea HOM05D006238 ORTHO05D007458 7.5e-32 141.7 262 76.0
ClCG06G015770 Citrullus lanatus HOM05D006238 ORTHO05D007458 7.5e-32 141.7 262 75.6
Gohir.D12G183800 Gossypium hirsutum HOM05D006238 ORTHO05D007458 7.5e-32 141.7 262 76.0
Lsat_1_v5_gn_1_13640 Lactuca sativa HOM05D006238 ORTHO05D007458 1.3e-31 141.0 252 78.2
BcaB05g21597 Brassica carinata HOM05D006238 ORTHO05D007458 1.7e-31 140.6 261 76.2
Thhalv10014418m.g Eutrema salsugineum HOM05D006238 ORTHO05D007458 2.2e-31 140.2 261 75.5
Solyc03g115410.3 Solanum lycopersicum HOM05D006238 ORTHO05D007458 4.9e-31 139.0 262 76.3
THA.LOC104801299 Tarenaya hassleriana HOM05D006238 ORTHO05D007458 4.9e-31 139.0 261 75.5
HanXRQChr02g0042551 Helianthus annuus HOM05D006238 ORTHO05D007458 8.3e-31 138.3 262 76.3
HanXRQChr14g0439161 Helianthus annuus HOM05D006238 ORTHO05D007458 8.3e-31 138.3 262 76.0
Carub.0006s0680 Capsella rubella HOM05D006238 ORTHO05D007458 2.4e-30 136.7 261 75.5
BcaNung04724 Brassica carinata HOM05D006238 ORTHO05D007458 3.2e-30 136.3 261 75.9
CAN.G479.27 Capsicum annuum HOM05D006238 ORTHO05D007458 3.2e-30 136.3 262 76.0
AT5G07910 Arabidopsis thaliana HOM05D006238 ORTHO05D007458 9.2e-30 134.8 261 75.1
FAN08G1023 Fragaria x ananassa HOM05D000113 ORTHO05D002571 9.2e-30 134.8 233 82.0
AL6G18240 Arabidopsis lyrata HOM05D006238 ORTHO05D007458 1.6e-29 134.0 261 74.7
BcaB01g05644 Brassica carinata HOM05D006238 ORTHO05D007458 1.6e-29 134.0 261 75.1
BcaB01g05688 Brassica carinata HOM05D006238 ORTHO05D007458 1.6e-29 134.0 261 74.7
C03p03970 Brassica napus HOM05D006238 ORTHO05D007458 1.6e-29 134.0 261 75.1
BolC3t12934H Brassica oleracea HOM05D006238 ORTHO05D007458 1.6e-29 134.0 261 75.1
CARHR205290 Cardamine hirsuta HOM05D006238 ORTHO05D007458 2.7e-29 133.3 261 74.7
A03p03520 Brassica napus HOM05D006238 ORTHO05D007458 3.5e-29 132.9 261 74.7
BraA03t09702Z Brassica rapa HOM05D006238 ORTHO05D007458 3.5e-29 132.9 261 74.7
MD06G1200000 Malus domestica HOM05D006238 ORTHO05D007458 3.5e-29 132.9 269 58.0
BcaB01g05687 Brassica carinata HOM05D006238 ORTHO05D007458 4.6e-29 132.5 261 74.3
DCAR_016594 Daucus carota HOM05D006238 ORTHO05D007458 7.8e-29 131.7 228 84.6
FAN13G1324 Fragaria x ananassa HOM05D000113 ORTHO05D002571 1.3e-28 131.0 229 83.0
PGSC0003DMG401024548 Solanum tuberosum HOM05D006238 ORTHO05D007458 1.3e-28 131.0 265 76.2
Aa31LG3G18600 Aethionema arabicum HOM05D006238 ORTHO05D007458 3.0e-28 129.8 284 57.7
Cc04_g15060 Coffea canephora HOM05D006238 ORTHO05D007458 1.1e-27 127.9 228 82.9
PSO384G2798 Papaver somniferum HOM05D006238 ORTHO05D007458 1.2e-26 124.4 262 74.4
PSO339G0502 Papaver somniferum HOM05D006238 ORTHO05D007458 1.6e-26 124.0 262 74.4
Dinv38791 Davidia involucrata HOM05D006238 ORTHO05D007458 4.7e-26 122.5 201 92.5
Gorai.008G197100 Gossypium raimondii HOM05D006238 ORTHO05D007458 4.0e-25 119.4 228 80.7
HPP92_013436 Vanilla planifolia HOM05D001674 ORTHO05D008374 1.2e-24 117.9 262 71.8
Cpa.g.sc94.12 Carica papaya HOM05D006238 ORTHO05D007458 1.3e-23 114.4 63 82.5
Phvul.009G193701 Phaseolus vulgaris HOM05D006238 ORTHO05D007458 6.4e-23 112.1 63 82.5
Manes.06G087000 Manihot esculenta HOM05D006238 ORTHO05D007458 8.3e-23 111.7 201 89.6
QL05p088277 Quercus lobata HOM05D003602 ORTHO05D007458 2.4e-22 110.2 62 82.3
PGSC0003DMG400005395 Solanum tuberosum HOM05D006238 ORTHO05D007458 1.2e-21 107.8 63 77.8
Nitab4.5_0005160g0060 Nicotiana tabacum HOM05D006238 ORTHO05D007458 7.8e-21 105.1 62 75.8
AUR62008501 Chenopodium quinoa HOM05D006238 ORTHO05D007458 1.9e-19 100.5 77 64.9
HPP92_027112 Vanilla planifolia HOM05D006238 ORTHO05D007458 5.6e-19 99.0 63 71.4
Oeu062485.1 Olea europaea HOM05D006238 ORTHO05D007458 7.3e-19 98.6 76 67.1
AUR62021591 Chenopodium quinoa HOM05D006238 ORTHO05D007458 1.2e-18 97.8 93 58.1
Sabra15G0078500 Salix brachista HOM05D006238 ORTHO05D007458 1.2e-18 97.8 97 53.6
Zm00001eb008470 Zea mays HOM05D006238 ORTHO05D007458 2.8e-18 96.7 268 68.3
Pp3c19_5770 Physcomitrium patens HOM05D006238 ORTHO05D007458 3.6e-18 96.3 262 69.1
Cpa.g.sc94.13 Carica papaya HOM05D006238 ORTHO05D007458 1.4e-17 94.4 75 64.0
Rhsim12G0152200 Rhododendron simsii HOM05D006238 ORTHO05D007458 1.4e-17 94.4 319 59.9
SMO364G0258 Selaginella moellendorffii HOM05D006238 ORTHO05D007458 1.4e-17 94.4 260 67.3
Hund26925 Selenicereus undatus HOM05D006238 ORTHO05D007458 2.4e-17 93.6 66 68.2
Dinv10691 Davidia involucrata HOM05D000773 ORTHO05D000588 3.1e-17 93.2 206 84.0
Sc10g0009770 Simmondsia chinensis HOM05D006238 ORTHO05D007458 6.8e-17 92.0 73 64.4
AagrBONN_evm.TU.Sc2ySwM_228.2402 Anthoceros agrestis HOM05D006238 ORTHO05D007458 1.2e-16 91.3 63 60.3
Peaxi162Scf00201g00133 Petunia axillaris HOM05D006238 ORTHO05D007458 1.5e-16 90.9 64 70.3
CDE10G0764 Ceratophyllum demersum HOM05D000773 ORTHO05D000588 3.5e-13 79.7 90 47.8
vmacro16511 Vaccinium macrocarpon HOM05D006238 ORTHO05D007458 1.0e-12 78.2 339 51.3
Os03g0212200 Oryza sativa ssp. japonica HOM05D006238 ORTHO05D007458 1.7e-12 77.4 75 49.3
CBR_g18689 Chara braunii HOM05D006238 ORTHO05D007458 4.3e-11 72.8 59 50.8
QL10p018168 Quercus lobata HOM05D006238 ORTHO05D007458 4.7e-10 69.3 55 58.2
Lj5A105G57 Lonicera japonica HOM05D006238 ORTHO05D007458 2.0e-08 63.9 52 61.5
Cre12.g503600 Chlamydomonas reinhardtii HOM05D006238 ORTHO05D007458 2.6e-08 63.5 61 45.9
Mapoly0043s0125 Marchantia polymorpha HOM05D006395 ORTHO05D007894 2.6e-08 63.5 60 41.7
SMO198G0061 Selaginella moellendorffii HOM05D006395 ORTHO05D007894 4.4e-08 62.8 61 42.6
AagrBONN_evm.TU.Sc2ySwM_228.749 Anthoceros agrestis HOM05D006395 ORTHO05D007894 2.2e-07 60.5 60 41.7
ATR0174G042 Amborella trichopoda HOM05D006395 ORTHO05D007894 8.4e-07 58.5 60 46.7
PRCOL_00001761 Prasinoderma coloniale HOM05D006238 ORTHO05D007458 8.4e-07 58.5 62 40.3
Hund26924 Selenicereus undatus HOM05D006238 ORTHO05D007458 8.4e-07 58.5 75 50.7
MBI15_g36485_MAGBIO Magnolia biondii HOM05D006395 ORTHO05D007894 1.1e-06 58.2 62 45.2
MCO07G688 Micromonas commoda HOM05D006238 ORTHO05D007458 1.1e-06 58.2 62 43.5
QL93p0869_0056 Quercus lobata HOM05D000176 ORTHO05D000106 1.1e-06 58.2 31 83.9
CBR_g52452 Chara braunii HOM05D006395 ORTHO05D007458 2.4e-06 57.0 60 40.0
GSVIVG01024681001 Vitis vinifera HOM05D006395 ORTHO05D007894 7.1e-06 55.5 61 44.3


User provided reference genes

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