Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold27G11496 Striga asiatica HOM05D007177 ORTHO05D008984 2.0e-175 619.0 311 100.0
Migut.A00273 Erythranthe guttata HOM05D007177 ORTHO05D008984 2.0e-90 336.7 298 61.7
MSTRG.11740 Avicennia marina HOM05D007177 ORTHO05D008984 4.5e-87 325.5 276 66.7
SalBow4G1425 Salvia bowleyana HOM05D007177 ORTHO05D008984 1.5e-82 310.5 278 62.2
Atru.chr7.2324 Acer truncatum HOM05D007177 ORTHO05D008984 2.2e-73 280.0 267 60.7
CSS0040333 Camellia sinensis var. sinensis HOM05D007177 ORTHO05D008984 3.7e-73 279.3 267 61.4
CANSAT25G2101 Cannabis sativa HOM05D007177 ORTHO05D008984 3.7e-73 279.3 265 60.8
CiPaw.08G015800 Carya illinoinensis HOM05D007177 ORTHO05D008984 1.1e-72 277.7 242 63.6
Hma1.2p1_0175F.1_g077220 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 1.8e-72 276.9 260 61.2
GSVIVG01035726001 Vitis vinifera HOM05D007177 ORTHO05D008984 3.1e-72 276.2 252 62.3
QL12p031282 Quercus lobata HOM05D007177 ORTHO05D008984 4.1e-72 275.8 228 68.0
vmacro11111 Vaccinium macrocarpon HOM05D007177 ORTHO05D008984 1.6e-71 273.9 254 61.8
Nitab4.5_0000125g0190 Nicotiana tabacum HOM05D007177 ORTHO05D008984 3.5e-71 272.7 241 63.5
CiPaw.07G217700 Carya illinoinensis HOM05D007177 ORTHO05D008984 5.9e-71 271.9 264 60.6
Manes.16G068300 Manihot esculenta HOM05D007177 ORTHO05D008984 7.7e-71 271.6 283 54.8
Sopen08g021780 Solanum pennellii HOM05D007177 ORTHO05D008984 7.7e-71 271.6 244 62.7
Nitab4.5_0009600g0010 Nicotiana tabacum HOM05D007177 ORTHO05D008984 1.3e-70 270.8 241 63.1
CAN.G21.13 Capsicum annuum HOM05D007177 ORTHO05D008984 1.7e-70 270.4 254 61.4
TAR383G0793 Trochodendron aralioides HOM05D007177 ORTHO05D008984 1.7e-70 270.4 275 59.6
Dinv35881 Davidia involucrata HOM05D007177 ORTHO05D008984 2.3e-70 270.0 266 60.2
Solyc08g067840.3 Solanum lycopersicum HOM05D007177 ORTHO05D008984 2.3e-70 270.0 244 62.3
Ciclev10009098m.g Citrus clementina HOM05D007177 ORTHO05D008984 3.8e-70 269.2 248 61.7
Cc08_g08290 Coffea canephora HOM05D007177 ORTHO05D008984 8.6e-70 268.1 235 65.1
Lj7A712G53 Lonicera japonica HOM05D007177 ORTHO05D008984 1.9e-69 266.9 245 62.0
Actinidia13290 Actinidia chinensis HOM05D007177 ORTHO05D008984 3.3e-69 266.2 266 58.6
unitig_748.g7498 Utricularia gibba HOM05D007177 ORTHO05D008984 3.3e-69 266.2 275 56.0
CsaV3_2G031600 Cucumis sativus L. HOM05D007177 ORTHO05D008984 4.2e-69 265.8 264 58.0
Eucgr.G02593 Eucalyptus grandis HOM05D007177 ORTHO05D008984 7.2e-69 265.0 219 66.7
Sed0014124 Sechium edule HOM05D007177 ORTHO05D008984 9.5e-69 264.6 263 58.2
Hund26404 Selenicereus undatus HOM05D007177 ORTHO05D008984 1.6e-68 263.8 238 61.8
MELO3C011212.2 Cucumis melo HOM05D007177 ORTHO05D008984 2.8e-68 263.1 264 57.2
Gohir.A06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 2.8e-68 263.1 293 53.6
TWI32G0279 Tripterygium wilfordii HOM05D007177 ORTHO05D008984 2.8e-68 263.1 294 51.0
Gohir.D06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 3.6e-68 262.7 293 52.9
Gorai.010G053800 Gossypium raimondii HOM05D007177 ORTHO05D008984 3.6e-68 262.7 293 52.9
Glyma.04G072300 Glycine max HOM05D007177 ORTHO05D008984 4.7e-68 262.3 256 58.2
Sabra06G0192800 Salix brachista HOM05D007177 ORTHO05D008984 6.1e-68 261.9 259 59.5
Aa31LG3G15740 Aethionema arabicum HOM05D007177 ORTHO05D008984 8.0e-68 261.5 259 57.5
Potri.006G246500 Populus trichocarpa HOM05D007177 ORTHO05D008984 8.0e-68 261.5 279 56.6
Glyma.06G073600 Glycine max HOM05D007177 ORTHO05D008984 1.0e-67 261.2 251 58.6
Sp6g32150 Schrenkiella parvula HOM05D007177 ORTHO05D008984 2.3e-67 260.0 287 52.6
AUR62024834 Chenopodium quinoa HOM05D007177 ORTHO05D008984 4.0e-67 259.2 268 56.7
Lalb_Chr23g0269021 Lupinus albus HOM05D007177 ORTHO05D008984 4.0e-67 259.2 264 58.0
Duzib168G0166 Durio zibethinus HOM05D007177 ORTHO05D008984 5.2e-67 258.8 262 57.3
BcaC04g19225 Brassica carinata HOM05D007177 ORTHO05D008984 6.8e-67 258.5 264 57.2
C09p65410 Brassica napus HOM05D007177 ORTHO05D008984 6.8e-67 258.5 264 57.2
BolC9t59366H Brassica oleracea HOM05D007177 ORTHO05D008984 6.8e-67 258.5 264 57.2
RcHm_v2.0_Chr6g0312741 Rosa chinensis HOM05D007177 ORTHO05D008984 8.9e-67 258.1 208 66.8
Thhalv10014231m.g Eutrema salsugineum HOM05D007177 ORTHO05D008984 1.2e-66 257.7 288 52.8
MD08G1136300 Malus domestica HOM05D007177 ORTHO05D008984 1.2e-66 257.7 223 62.8
ECA233G2849 Erigeron canadensis HOM05D003107 ORTHO05D008984 1.5e-66 257.3 259 56.4
Thecc.09G144000 Theobroma cacao HOM05D007177 ORTHO05D008984 2.6e-66 256.5 262 56.9
Lsat_1_v5_gn_6_10880 Lactuca sativa HOM05D003107 ORTHO05D008984 3.4e-66 256.1 222 60.8
Rhsim02G0187100 Rhododendron simsii HOM05D007177 ORTHO05D008984 4.4e-66 255.8 250 60.0
THA.LOC104815045 Tarenaya hassleriana HOM05D007177 ORTHO05D008984 5.7e-66 255.4 259 54.4
Nn8g39274 Nelumbo nucifera HOM05D007177 ORTHO05D008984 7.5e-66 255.0 289 54.7
A10p26300 Brassica napus HOM05D007177 ORTHO05D008984 9.8e-66 254.6 243 59.3
BraA10t44687Z Brassica rapa HOM05D007177 ORTHO05D008984 9.8e-66 254.6 243 59.3
CARHR201780 Cardamine hirsuta HOM05D007177 ORTHO05D008984 9.8e-66 254.6 287 52.6
AL6G22110 Arabidopsis lyrata HOM05D007177 ORTHO05D008984 3.7e-65 252.7 288 52.8
AT5G11450 Arabidopsis thaliana HOM05D007177 ORTHO05D008984 4.9e-65 252.3 288 52.1
FvH4_2g30170 Fragaria vesca HOM05D007177 ORTHO05D008984 4.9e-65 252.3 205 65.9
FAN27G1396 Fragaria x ananassa HOM05D007177 ORTHO05D008984 4.9e-65 252.3 207 65.7
Peaxi162Scf00105g01429 Petunia axillaris HOM05D007177 ORTHO05D008984 8.3e-65 251.5 237 60.8
VMungo1309G2383 Vigna mungo HOM05D007177 ORTHO05D008984 1.8e-64 250.4 257 55.6
FAN24G2430 Fragaria x ananassa HOM05D007177 ORTHO05D008984 2.4e-64 250.0 263 55.9
Ah.10g025430 Amaranthus hybridus HOM05D007177 ORTHO05D008984 3.2e-64 249.6 251 60.6
Carub.0006s0990 Capsella rubella HOM05D007177 ORTHO05D008984 3.2e-64 249.6 288 52.8
Phvul.009G098000 Phaseolus vulgaris HOM05D007177 ORTHO05D008984 4.1e-64 249.2 262 55.0
DCAR_006262 Daucus carota HOM05D007177 ORTHO05D008984 9.2e-64 248.1 257 55.3
AUR62032383 Chenopodium quinoa HOM05D007177 ORTHO05D008984 4.6e-63 245.7 301 50.5
BcaB08g37058 Brassica carinata HOM05D007177 ORTHO05D008984 1.0e-62 244.6 271 55.0
Aqoxy7G01836 Aquilegia oxysepala HOM05D007177 ORTHO05D008984 1.7e-62 243.8 289 52.9
arahy.Tifrunner.gnm1.ann1.JYH77Y Arachis hypogaea HOM05D007177 ORTHO05D008984 2.9e-62 243.0 236 58.1
Cpa.g.sc91.5 Carica papaya HOM05D007177 ORTHO05D008984 5.0e-62 242.3 217 60.8
MD15G1115400 Malus domestica HOM05D007177 ORTHO05D008984 6.6e-62 241.9 269 51.7
COL.COLO4_24067 Corchorus olitorius HOM05D007177 ORTHO05D008984 1.5e-61 240.7 217 64.5
Prupe.1G466600 Prunus persica HOM05D007177 ORTHO05D008984 6.1e-60 235.3 236 58.1
HanXRQChr02g0048101 Helianthus annuus HOM05D007177 ORTHO05D008984 1.4e-59 234.2 312 46.8
ClCG08G012880 Citrullus lanatus HOM05D007177 ORTHO05D008984 3.1e-59 233.0 196 65.8
CDE01G0003 Ceratophyllum demersum HOM05D007177 ORTHO05D008984 4.0e-59 232.6 289 49.5
TPR.G34677 Trifolium pratense HOM05D007177 ORTHO05D008984 1.3e-57 227.6 217 59.9
PSO063G2030 Papaver somniferum HOM05D007177 ORTHO05D008984 1.7e-57 227.3 269 50.6
Os01g0617900 Oryza sativa ssp. japonica HOM05D007177 ORTHO05D008984 3.7e-57 226.1 220 58.2
PSO782G2748 Papaver somniferum HOM05D007177 ORTHO05D008984 3.7e-57 226.1 269 50.6
ATR0037G062 Amborella trichopoda HOM05D007177 ORTHO05D008984 6.4e-57 225.3 190 63.2
Zm00001eb159760 Zea mays HOM05D007177 ORTHO05D008984 8.3e-57 224.9 209 58.4
FAN15G3007 Fragaria x ananassa HOM05D007177 ORTHO05D008984 1.9e-56 223.8 210 60.0
FAN20G1087 Fragaria x ananassa HOM05D007177 ORTHO05D008984 1.9e-56 223.8 210 60.0
Lj1g0018262 Lotus japonicus HOM05D007177 ORTHO05D008984 5.4e-56 222.2 260 51.2
arahy.Tifrunner.gnm1.ann1.22L7FB Arachis hypogaea HOM05D007177 ORTHO05D008984 2.0e-55 220.3 228 55.7
Medtr3g108040 Medicago truncatula HOM05D007177 ORTHO05D008984 2.7e-55 219.9 210 60.0
Zm00001eb358300 Zea mays HOM05D007177 ORTHO05D008984 1.0e-54 218.0 220 55.5
Cfa013211 Carpinus fangiana HOM05D007177 ORTHO05D008984 1.1e-53 214.5 159 73.6
Ca_15697_v3 Cicer arietinum L. HOM05D007177 ORTHO05D008984 1.1e-53 214.5 205 60.0
Psat5g027720 Pisum sativum HOM05D007177 ORTHO05D008984 2.8e-52 209.9 183 61.2
HPP92_021881 Vanilla planifolia HOM05D007177 ORTHO05D008984 2.8e-52 209.9 243 50.6
Haze_21624 Corylus avellana HOM05D007177 ORTHO05D008984 4.7e-52 209.1 143 76.9
EL10Ac2g02536 Beta vulgaris HOM05D007177 ORTHO05D008984 1.2e-50 204.5 265 47.9
PGR102G2243 Punica granatum HOM05D007177 ORTHO05D008984 6.6e-46 188.7 227 52.4
Mapoly0103s0019 Marchantia polymorpha HOM05D007177 ORTHO05D008984 1.1e-40 171.4 242 44.2
Pp3c27_2770 Physcomitrium patens HOM05D007177 ORTHO05D008984 2.1e-39 167.2 223 46.6
Sc23g0007000 Simmondsia chinensis HOM05D007177 ORTHO05D008984 5.6e-37 159.1 176 54.5
AUR62011224 Chenopodium quinoa HOM05D007177 ORTHO05D008984 2.7e-31 140.2 274 39.1
SEGI_07055 Sequoiadendron giganteum HOM05D007177 ORTHO05D008984 6.9e-27 125.6 146 50.0
Cre07.g328200 Chlamydomonas reinhardtii HOM05D007177 ORTHO05D008984 3.5e-15 86.7 213 31.5
MCO07G393 Micromonas commoda HOM05D007177 ORTHO05D008984 1.8e-14 84.3 167 34.1
Actinidia13424 Actinidia chinensis HOM05D007177 ORTHO05D008984 3.1e-11 73.6 55 74.5
Gohir.D06G048101 Gossypium hirsutum HOM05D007177 ORTHO05D008984 7.9e-07 58.9 100 39.0


User provided reference genes

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