Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold279G46778 Striga asiatica HOM05D001433 ORTHO05D021021 1.8e-145 519.2 265 100.0
SGA_v2.0_scaffold7G04048 Striga asiatica HOM05D001361 ORTHO05D005105 7.9e-32 141.7 107 74.8
SGA_v2.0_scaffold192G40562 Striga asiatica HOM05D001433 ORTHO05D005019 3.7e-29 132.9 68 89.7
SalBow4G0367 Salvia bowleyana HOM05D001433 ORTHO05D005019 3.4e-27 126.3 66 86.4
SalBow4G2448 Salvia bowleyana HOM05D001433 ORTHO05D005019 3.4e-27 126.3 66 86.4
Solyc03g083440.4 Solanum lycopersicum HOM05D001433 ORTHO05D005019 5.0e-26 122.5 66 80.3
Hund11674 Selenicereus undatus HOM05D001433 ORTHO05D005019 8.4e-26 121.7 66 80.3
ECA232G2377 Erigeron canadensis HOM05D001433 ORTHO05D005019 1.1e-25 121.3 66 80.3
HanXRQChr09g0253001 Helianthus annuus HOM05D001433 ORTHO05D005019 1.1e-25 121.3 66 80.3
Lsat_1_v5_gn_9_58201 Lactuca sativa HOM05D001433 ORTHO05D005019 1.1e-25 121.3 66 80.3
Oeu041044.1 Olea europaea HOM05D001433 ORTHO05D005019 1.1e-25 121.3 66 81.8
Sabra15G0013400 Salix brachista HOM05D001433 ORTHO05D005019 1.1e-25 121.3 66 80.3
Oeu041320.1 Olea europaea HOM05D001433 ORTHO05D005019 1.4e-25 120.9 66 80.3
MD07G1290500 Malus domestica HOM05D001433 ORTHO05D005019 1.9e-25 120.6 66 78.8
HanXRQChr15g0493171 Helianthus annuus HOM05D001433 ORTHO05D005019 3.2e-25 119.8 66 78.8
Potri.015G017500 Populus trichocarpa HOM05D001433 ORTHO05D005019 3.2e-25 119.8 66 78.8
Actinidia08638 Actinidia chinensis HOM05D001433 ORTHO05D005019 4.2e-25 119.4 66 78.8
CAN.G108.62 Capsicum annuum HOM05D001433 ORTHO05D005019 4.2e-25 119.4 66 78.8
Migut.F00228 Erythranthe guttata HOM05D001433 ORTHO05D005019 4.2e-25 119.4 66 81.8
Sopen03g023210 Solanum pennellii HOM05D001433 ORTHO05D005019 4.2e-25 119.4 66 78.8
Duzib084G0325 Durio zibethinus HOM05D001433 ORTHO05D005019 5.5e-25 119.0 66 77.3
EL10Ac3g05303 Beta vulgaris HOM05D001433 ORTHO05D005019 9.3e-25 118.2 66 78.8
Prupe.2G311700 Prunus persica HOM05D001433 ORTHO05D005019 9.3e-25 118.2 66 78.8
Duzib205G1094 Durio zibethinus HOM05D001433 ORTHO05D005019 1.2e-24 117.9 66 75.8
Ah.07g205860 Amaranthus hybridus HOM05D001433 ORTHO05D005019 1.6e-24 117.5 66 77.3
Manes.14G006836 Manihot esculenta HOM05D001433 ORTHO05D005019 1.6e-24 117.5 66 77.3
Peaxi162Scf00550g00052 Petunia axillaris HOM05D001433 ORTHO05D005019 1.6e-24 117.5 66 77.3
MD01G1219500 Malus domestica HOM05D001433 ORTHO05D005019 2.1e-24 117.1 66 77.3
Duzib068G1332 Durio zibethinus HOM05D001433 ORTHO05D005019 2.7e-24 116.7 66 74.2
Hma1.2p1_0538F.1_g174380 Hydrangea macrophylla HOM05D001433 ORTHO05D005019 2.7e-24 116.7 66 75.8
Sc13g0009760 Simmondsia chinensis HOM05D001433 ORTHO05D005019 2.7e-24 116.7 66 77.3
AUR62006114 Chenopodium quinoa HOM05D001433 ORTHO05D005019 3.5e-24 116.3 66 78.8
Gohir.D12G251500 Gossypium hirsutum HOM05D001433 ORTHO05D005019 3.5e-24 116.3 66 75.8
Gorai.008G269600 Gossypium raimondii HOM05D001433 ORTHO05D005019 3.5e-24 116.3 66 75.8
GSVIVG01038714001 Vitis vinifera HOM05D001433 ORTHO05D005019 3.5e-24 116.3 66 75.8
Nitab4.5_0000714g0070 Nicotiana tabacum HOM05D001433 ORTHO05D005019 4.6e-24 115.9 66 75.8
Nitab4.5_0002492g0040 Nicotiana tabacum HOM05D001433 ORTHO05D005019 4.6e-24 115.9 66 75.8
Rhsim03G0207700 Rhododendron simsii HOM05D001433 ORTHO05D005019 4.6e-24 115.9 66 75.8
AUR62019375 Chenopodium quinoa HOM05D001433 ORTHO05D005019 6.1e-24 115.5 66 77.3
FvH4_7g31770 Fragaria vesca HOM05D001433 ORTHO05D005019 6.1e-24 115.5 66 75.8
FAN01G1716 Fragaria x ananassa HOM05D001433 ORTHO05D005019 6.1e-24 115.5 66 75.8
FAN03G1831 Fragaria x ananassa HOM05D001433 ORTHO05D005019 6.1e-24 115.5 66 75.8
FAN06G0504 Fragaria x ananassa HOM05D001433 ORTHO05D005019 6.1e-24 115.5 66 75.8
FAN06G0708 Fragaria x ananassa HOM05D001433 ORTHO05D005019 6.1e-24 115.5 66 75.8
FAN10G1144 Fragaria x ananassa HOM05D001433 ORTHO05D005019 6.1e-24 115.5 66 75.8
FAN10G3586 Fragaria x ananassa HOM05D001433 ORTHO05D005019 6.1e-24 115.5 66 75.8
Rhsim03G0207200 Rhododendron simsii HOM05D001433 ORTHO05D005019 6.1e-24 115.5 113 55.8
Potri.012G011700 Populus trichocarpa HOM05D001433 ORTHO05D005019 7.9e-24 115.2 66 77.3
CANSAT21G0603 Cannabis sativa HOM05D001433 ORTHO05D005019 1.0e-23 114.8 66 75.8
Gohir.A12G250700 Gossypium hirsutum HOM05D001433 ORTHO05D005019 1.0e-23 114.8 66 74.2
Rhsim09G0205100 Rhododendron simsii HOM05D001433 ORTHO05D005019 1.0e-23 114.8 66 75.8
Actinidia34209 Actinidia chinensis HOM05D001433 ORTHO05D005019 1.3e-23 114.4 66 75.8
CSS0007758 Camellia sinensis var. sinensis HOM05D001433 ORTHO05D005019 1.3e-23 114.4 66 74.2
Dinv35322 Davidia involucrata HOM05D001433 ORTHO05D005019 1.3e-23 114.4 66 72.7
Manes.06G159400 Manihot esculenta HOM05D001433 ORTHO05D005019 1.3e-23 114.4 66 74.2
QL09p009601 Quercus lobata HOM05D001433 ORTHO05D005019 1.3e-23 114.4 66 74.2
Hund04854 Selenicereus undatus HOM05D001433 ORTHO05D005019 1.3e-23 114.4 66 75.8
TWI23G0733 Tripterygium wilfordii HOM05D001433 ORTHO05D005019 1.3e-23 114.4 66 72.7
vmacro06546 Vaccinium macrocarpon HOM05D001433 ORTHO05D005019 1.3e-23 114.4 66 75.8
DCAR_020316 Daucus carota HOM05D001433 ORTHO05D005019 1.8e-23 114.0 66 77.3
Gohir.A05G414000 Gossypium hirsutum HOM05D001433 ORTHO05D005019 1.8e-23 114.0 66 72.7
Lj3C907T3 Lonicera japonica HOM05D001433 ORTHO05D005019 1.8e-23 114.0 66 75.8
CiPaw.05G252100 Carya illinoinensis HOM05D001433 ORTHO05D005019 3.0e-23 113.2 66 72.7
CiPaw.06G009900 Carya illinoinensis HOM05D001433 ORTHO05D005019 3.0e-23 113.2 66 75.8
Cc02_g01700 Coffea canephora HOM05D001433 ORTHO05D005019 3.0e-23 113.2 66 75.8
RcHm_v2.0_Chr1g0381001 Rosa chinensis HOM05D001433 ORTHO05D005019 3.0e-23 113.2 66 74.2
vmacro10115 Vaccinium macrocarpon HOM05D001433 ORTHO05D005019 3.0e-23 113.2 66 74.2
TWI14G0941 Tripterygium wilfordii HOM05D001433 ORTHO05D005019 3.9e-23 112.8 66 69.7
TAR375G0916 Trochodendron aralioides HOM05D001433 ORTHO05D005019 3.9e-23 112.8 68 73.5
TAR375G0942 Trochodendron aralioides HOM05D001433 ORTHO05D005019 3.9e-23 112.8 68 73.5
Ciclev10004120m.g Citrus clementina HOM05D001433 ORTHO05D005019 5.1e-23 112.5 66 72.7
Dinv29294 Davidia involucrata HOM05D001433 ORTHO05D005019 5.1e-23 112.5 108 54.6
Os05g0555600 Oryza sativa ssp. japonica HOM05D001433 ORTHO05D005019 5.1e-23 112.5 66 74.2
Sed0021586 Sechium edule HOM05D001433 ORTHO05D005019 5.1e-23 112.5 66 71.2
Sabra12G0018500 Salix brachista HOM05D001433 ORTHO05D005019 6.7e-23 112.1 66 77.3
Nn1g01871 Nelumbo nucifera HOM05D001433 ORTHO05D005019 8.7e-23 111.7 66 72.7
Eucgr.A01471 Eucalyptus grandis HOM05D001433 ORTHO05D005019 1.1e-22 111.3 66 71.2
Nn3g19010 Nelumbo nucifera HOM05D001433 ORTHO05D005019 1.1e-22 111.3 66 71.2
CsaV3_3G027930 Cucumis sativus L. HOM05D001433 ORTHO05D005019 1.5e-22 110.9 66 71.2
SGA_v2.0_scaffold114G31917 Striga asiatica HOM05D001361 ORTHO05D005105 1.5e-22 110.9 190 47.4
THA.LOC104811925 Tarenaya hassleriana HOM05D001433 ORTHO05D005019 1.5e-22 110.9 66 72.7
HPP92_008165 Vanilla planifolia HOM05D001433 ORTHO05D005019 1.5e-22 110.9 66 71.2
CSS0050330 Camellia sinensis var. sinensis HOM05D001433 ORTHO05D005019 2.5e-22 110.2 66 71.2
vmacro06543 Vaccinium macrocarpon HOM05D001433 ORTHO05D005019 2.5e-22 110.2 113 52.2
SEGI_17472 Sequoiadendron giganteum HOM05D001433 ORTHO05D005019 3.3e-22 109.8 66 74.2
ATR0602G279 Amborella trichopoda HOM05D001433 ORTHO05D005019 4.3e-22 109.4 66 71.2
unitig_748.g8525 Utricularia gibba HOM05D001433 ORTHO05D005019 4.3e-22 109.4 66 71.2
Sed0006803 Sechium edule HOM05D001433 ORTHO05D005019 7.4e-22 108.6 66 71.2
AT5G53460 Arabidopsis thaliana HOM05D001433 ORTHO05D005019 9.7e-22 108.2 66 71.2
BcaC01g06255 Brassica carinata HOM05D001433 ORTHO05D005019 9.7e-22 108.2 66 68.2
A03p15140 Brassica napus HOM05D001433 ORTHO05D005019 9.7e-22 108.2 66 68.2
C03p17640 Brassica napus HOM05D001433 ORTHO05D005019 9.7e-22 108.2 66 68.2
BolC3t14177H Brassica oleracea HOM05D001433 ORTHO05D005019 9.7e-22 108.2 66 68.2
BraA03t10809Z Brassica rapa HOM05D001433 ORTHO05D005019 9.7e-22 108.2 66 68.2
DCAR_008916 Daucus carota HOM05D001433 ORTHO05D005019 9.7e-22 108.2 108 53.7
Zm00001eb360480 Zea mays HOM05D001433 ORTHO05D005019 9.7e-22 108.2 122 47.5
Atru.chr1.150 Acer truncatum HOM05D001433 ORTHO05D005019 1.3e-21 107.8 66 74.2
AL8G28160 Arabidopsis lyrata HOM05D001433 ORTHO05D005019 1.3e-21 107.8 66 71.2
Haze_00186 Corylus avellana HOM05D001433 ORTHO05D005019 1.3e-21 107.8 66 71.2
Sp6g15593 Schrenkiella parvula HOM05D001433 ORTHO05D005019 1.3e-21 107.8 66 68.2
Zm00001eb166270 Zea mays HOM05D001433 ORTHO05D021021 1.6e-21 107.5 122 46.7
Aqoxy7G00099 Aquilegia oxysepala HOM05D001433 ORTHO05D005019 2.2e-21 107.1 66 69.7
Os01g0681900 Oryza sativa ssp. japonica HOM05D001433 ORTHO05D005019 2.2e-21 107.1 66 71.2
Zm00001eb021930 Zea mays HOM05D001433 ORTHO05D021021 2.2e-21 107.1 65 69.2
Aqoxy5G04232 Aquilegia oxysepala HOM05D001433 ORTHO05D005019 3.7e-21 106.3 66 69.7
ClCG05G008840 Citrullus lanatus HOM05D001433 ORTHO05D005019 3.7e-21 106.3 70 68.6
PSO063G5383 Papaver somniferum HOM05D001433 ORTHO05D005019 4.8e-21 105.9 66 71.2
TAR629G0032 Trochodendron aralioides HOM05D001433 ORTHO05D005019 4.8e-21 105.9 74 66.2
PSO170G0996 Papaver somniferum HOM05D001433 ORTHO05D005019 6.3e-21 105.5 66 71.2
PGR042G1482 Punica granatum HOM05D001433 ORTHO05D005019 6.3e-21 105.5 66 69.7
Lj1A1014G37 Lonicera japonica HOM05D001433 ORTHO05D005019 1.4e-20 104.4 74 66.2
CDE02G2166 Ceratophyllum demersum HOM05D001433 ORTHO05D005019 3.1e-20 103.2 66 69.7
arahy.Tifrunner.gnm1.ann1.A1ZC3A Arachis hypogaea HOM05D001433 ORTHO05D005019 4.1e-20 102.8 66 72.7
arahy.Tifrunner.gnm1.ann1.ZYZ79R Arachis hypogaea HOM05D001433 ORTHO05D005019 4.1e-20 102.8 66 72.7
CDE10G1071 Ceratophyllum demersum HOM05D001433 ORTHO05D005019 5.3e-20 102.4 65 69.2
Phvul.009G053900 Phaseolus vulgaris HOM05D001433 ORTHO05D005019 1.5e-19 100.9 66 69.7
SHI02382 Sapria himalayana HOM05D001433 ORTHO05D005019 1.5e-19 100.9 66 66.7
VMungo1309G1831 Vigna mungo HOM05D001433 ORTHO05D005019 1.5e-19 100.9 66 69.7
Zm00001eb329820 Zea mays HOM05D001433 ORTHO05D021021 1.5e-19 100.9 122 45.1
Glyma.14G162300 Glycine max HOM05D001433 ORTHO05D005019 2.6e-19 100.1 116 51.7
Glyma.04G236900 Glycine max HOM05D001433 ORTHO05D005019 3.4e-19 99.8 66 69.7
Glyma.06G127400 Glycine max HOM05D001433 ORTHO05D005019 3.4e-19 99.8 66 69.7
CDE10G1303 Ceratophyllum demersum HOM05D001433 ORTHO05D005019 5.9e-19 99.0 198 36.9
Glyma.19G065600 Glycine max HOM05D001433 ORTHO05D005019 5.9e-19 99.0 116 51.7
SMO302G0048 Selaginella moellendorffii HOM05D001433 ORTHO05D005019 1.0e-18 98.2 67 65.7
SMO353G0329 Selaginella moellendorffii HOM05D001433 ORTHO05D005019 1.0e-18 98.2 67 65.7
Zm00001eb279170 Zea mays HOM05D001433 ORTHO05D021021 1.3e-18 97.8 104 48.1
arahy.Tifrunner.gnm1.ann1.HI2JIU Arachis hypogaea HOM05D001433 ORTHO05D005019 1.7e-18 97.4 116 50.9
Zm00001eb295210 Zea mays HOM05D001433 ORTHO05D017478 2.2e-18 97.1 114 47.4
Carub.0008s1362 Capsella rubella HOM05D001433 ORTHO05D005019 6.5e-18 95.5 119 47.9
Lj1g0027622 Lotus japonicus HOM05D001433 ORTHO05D005019 6.5e-18 95.5 116 50.9
SGA_v2.0_scaffold110G31323 Striga asiatica HOM05D001433 ORTHO05D011977 6.5e-18 95.5 106 53.8
Ca_12725_v3 Cicer arietinum L. HOM05D001433 ORTHO05D005019 8.5e-18 95.1 87 55.2
Thhalv10012414m.g Eutrema salsugineum HOM05D001433 ORTHO05D005019 8.5e-18 95.1 119 47.9
Thecc.03G195800 Theobroma cacao HOM05D001433 ORTHO05D005019 8.5e-18 95.1 119 47.9
Lalb_Chr11g0066781 Lupinus albus HOM05D001433 ORTHO05D005019 1.1e-17 94.7 66 68.2
CARHR266580 Cardamine hirsuta HOM05D001433 ORTHO05D005019 1.4e-17 94.4 116 50.0
MBI07_g07096_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D005019 1.4e-17 94.4 66 69.7
Phvul.001G076400 Phaseolus vulgaris HOM05D001433 ORTHO05D005019 1.9e-17 94.0 116 49.1
Psat6g037200 Pisum sativum HOM05D001433 ORTHO05D005019 1.9e-17 94.0 66 65.2
Lalb_Chr08g0240351 Lupinus albus HOM05D001433 ORTHO05D005019 3.2e-17 93.2 116 48.3
MBI06_g08464_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D005019 4.2e-17 92.8 66 68.2
Medtr1g027020 Medicago truncatula HOM05D001433 ORTHO05D005019 7.2e-17 92.0 66 65.2
VMungo0647G1305 Vigna mungo HOM05D001433 ORTHO05D005019 7.2e-17 92.0 116 48.3
TPR.G20023 Trifolium pratense HOM05D001433 ORTHO05D005019 9.4e-17 91.7 66 63.6
Pp3c10_8200 Physcomitrium patens HOM05D001433 ORTHO05D005019 1.2e-16 91.3 116 45.7
Cpa.g.sc3.65 Carica papaya HOM05D001433 ORTHO05D005019 2.7e-16 90.1 116 46.6
Mapoly0002s0330 Marchantia polymorpha HOM05D001433 ORTHO05D005019 3.6e-16 89.7 67 61.2
CBR_g18718 Chara braunii HOM05D001433 ORTHO05D005019 6.1e-16 89.0 65 63.1
Pp3c5_20080 Physcomitrium patens HOM05D001433 ORTHO05D005019 6.1e-16 89.0 67 61.2
CBR_g18711 Chara braunii HOM05D001433 ORTHO05D005019 1.8e-15 87.4 65 58.5
AagrBONN_evm.TU.Sc2ySwM_344.3239 Anthoceros agrestis HOM05D001433 ORTHO05D005019 3.0e-15 86.7 114 42.1
Pp3c14_8740 Physcomitrium patens HOM05D001433 ORTHO05D005019 3.9e-15 86.3 116 44.0
Pp3c16_19110 Physcomitrium patens HOM05D001433 ORTHO05D005019 8.8e-15 85.1 67 56.7
Aa31LG3G9620 Aethionema arabicum HOM05D001433 ORTHO05D005019 1.1e-14 84.7 116 44.8
MCO07G759 Micromonas commoda HOM05D001433 ORTHO05D005019 9.7e-14 81.6 68 51.5
CBR_g31844 Chara braunii HOM05D001433 ORTHO05D005019 1.8e-12 77.4 64 54.7
MELO3C008481.2 Cucumis melo HOM05D001433 ORTHO05D005019 3.1e-12 76.6 116 40.5
SGA_v2.0_scaffold237G43833 Striga asiatica HOM05D001433 ORTHO05D399920 7.7e-11 72.0 53 81.1
Cre13.g592200 Chlamydomonas reinhardtii HOM05D001433 ORTHO05D005019 1.3e-10 71.2 66 48.5
Migut.K00986 Erythranthe guttata HOM05D001361 ORTHO05D005105 1.3e-10 71.2 108 46.3
SMO302G0002 Selaginella moellendorffii HOM05D001433 ORTHO05D005019 1.7e-10 70.9 116 41.4
Zm00001eb156610 Zea mays HOM05D001433 ORTHO05D005019 1.7e-10 70.9 116 41.4
Haze_26266 Corylus avellana HOM05D001433 ORTHO05D005019 1.9e-09 67.4 62 46.8
MSTRG.486 Avicennia marina HOM05D001361 ORTHO05D005105 7.2e-09 65.5 156 38.5
MBI18_g18667_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D015058 7.2e-09 65.5 50 64.0
MBI19_g37427_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D015058 2.1e-08 63.9 156 32.7
MBI04_g13670_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D015058 7.9e-08 62.0 50 62.0
MBI04_g11122_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 5.1e-07 59.3 55 56.4
Oeu004465.2 Olea europaea HOM05D001361 ORTHO05D005105 1.1e-06 58.2 109 39.4
CAN.G1358.16 Capsicum annuum HOM05D001361 ORTHO05D005105 1.5e-06 57.8 112 40.2
MSTRG.8019 Avicennia marina HOM05D001361 ORTHO05D005105 2.0e-06 57.4 151 33.1
Dinv17585 Davidia involucrata HOM05D001361 ORTHO05D005105 3.3e-06 56.6 108 41.7
Pp3c7_6520 Physcomitrium patens HOM05D001433 ORTHO05D005172 4.4e-06 56.2 65 43.1


User provided reference genes

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