Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold276G46606 Striga asiatica HOM05D039299 ORTHO05D001571 7.2e-65 250.4 122 100.0
SGA_v2.0_scaffold53G19352 Striga asiatica HOM05D039299 ORTHO05D001571 1.9e-36 156.0 122 71.3
MSTRG.19226 Avicennia marina HOM05D001688 ORTHO05D001571 2.1e-11 72.8 46 78.3
MSTRG.10350 Avicennia marina HOM05D001688 ORTHO05D001571 7.9e-11 70.9 35 94.3
SGA_v2.0_scaffold40G15411 Striga asiatica HOM05D001688 ORTHO05D001571 1.3e-10 70.1 46 76.1
SGA_v2.0_scaffold75G24799 Striga asiatica HOM05D001688 ORTHO05D001571 3.0e-10 68.9 35 91.4
MSTRG.26653 Avicennia marina HOM05D001688 ORTHO05D001571 3.3e-09 65.5 38 81.6
CSS0011669 Camellia sinensis var. sinensis HOM05D001688 ORTHO05D001571 3.3e-09 65.5 57 57.9
SalBow3G0353 Salvia bowleyana HOM05D001688 ORTHO05D001571 7.4e-09 64.3 45 73.3
Dinv19823 Davidia involucrata HOM05D001688 ORTHO05D001571 2.8e-08 62.4 35 82.9
Peaxi162Scf00433g00087 Petunia axillaris HOM05D001688 ORTHO05D001571 6.2e-08 61.2 35 85.7
DCAR_020779 Daucus carota HOM05D001688 ORTHO05D001571 8.1e-08 60.8 88 46.6
Nitab4.5_0001922g0030 Nicotiana tabacum HOM05D001688 ORTHO05D001571 8.1e-08 60.8 46 69.6
Nitab4.5_0010922g0040 Nicotiana tabacum HOM05D001688 ORTHO05D001571 8.1e-08 60.8 46 69.6
Solyc10g085560.3 Solanum lycopersicum HOM05D001688 ORTHO05D001571 2.4e-07 59.3 35 82.9
Sopen10g034970 Solanum pennellii HOM05D001688 ORTHO05D001571 2.4e-07 59.3 35 82.9
PGSC0003DMG400008398 Solanum tuberosum HOM05D001688 ORTHO05D001571 2.4e-07 59.3 35 82.9
CAN.G1099.3 Capsicum annuum HOM05D001688 ORTHO05D001571 3.1e-07 58.9 35 80.0
Dinv21263 Davidia involucrata HOM05D001688 ORTHO05D001571 2.6e-06 55.8 35 74.3
Rhsim03G0081700 Rhododendron simsii HOM05D001688 ORTHO05D001571 2.6e-06 55.8 35 74.3
GSVIVG01033774001 Vitis vinifera HOM05D001688 ORTHO05D001571 2.6e-06 55.8 59 54.2
ECA248G1510 Erigeron canadensis HOM05D001688 ORTHO05D001571 3.4e-06 55.5 66 50.0
Rhsim04G0136200 Rhododendron simsii HOM05D001688 ORTHO05D001571 3.4e-06 55.5 35 74.3
Nitab4.5_0005447g0010 Nicotiana tabacum HOM05D001688 ORTHO05D001571 4.5e-06 55.1 35 77.1


User provided reference genes

Program Settings