Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold275G46594 Striga asiatica HOM05D005066 ORTHO05D406259 6.1e-183 644.0 332 100.0
SGA_v2.0_scaffold108G30855 Striga asiatica HOM05D005066 ORTHO05D006138 1.6e-13 81.3 168 39.3
FvH4_2g37550 Fragaria vesca HOM05D005066 ORTHO05D006138 9.6e-11 72.0 177 33.9
Lalb_Chr23g0265821 Lupinus albus HOM05D005066 ORTHO05D006138 1.3e-10 71.6 177 33.9
RcHm_v2.0_Chr6g0304181 Rosa chinensis HOM05D005066 ORTHO05D006138 1.3e-10 71.6 178 33.7
CsaV3_6G031630 Cucumis sativus L. HOM05D005066 ORTHO05D006138 2.1e-10 70.9 168 33.3
MSTRG.27774 Avicennia marina HOM05D005066 ORTHO05D006138 2.8e-10 70.5 175 36.0
FAN20G0881 Fragaria x ananassa HOM05D005066 ORTHO05D006138 2.8e-10 70.5 175 33.7
FAN27G0843 Fragaria x ananassa HOM05D005066 ORTHO05D006138 2.8e-10 70.5 175 33.7
FAN15G0307 Fragaria x ananassa HOM05D005066 ORTHO05D006138 4.8e-10 69.7 167 34.1
vmacro21822 Vaccinium macrocarpon HOM05D005066 ORTHO05D006138 6.2e-10 69.3 218 33.5
Glyma.06G018800 Glycine max HOM05D005066 ORTHO05D006138 8.1e-10 68.9 176 33.0
DCAR_013911 Daucus carota HOM05D005066 ORTHO05D006138 1.1e-09 68.6 180 35.0
GSVIVG01008680001 Vitis vinifera HOM05D005066 ORTHO05D006138 1.1e-09 68.6 167 35.3
Ca_15439_v3 Cicer arietinum L. HOM05D005066 ORTHO05D006138 1.4e-09 68.2 171 32.7
Migut.C00955 Erythranthe guttata HOM05D005066 ORTHO05D006138 1.4e-09 68.2 34 85.3
Sc15g0004490 Simmondsia chinensis HOM05D005066 ORTHO05D006138 1.4e-09 68.2 52 61.5
Cc10_g00720 Coffea canephora HOM05D005066 ORTHO05D006138 1.8e-09 67.8 51 64.7
Glyma.04G018500 Glycine max HOM05D005066 ORTHO05D006138 1.8e-09 67.8 176 33.0
Lj1g0027661 Lotus japonicus HOM05D005066 ORTHO05D006138 1.8e-09 67.8 175 34.3
Medtr3g115200 Medicago truncatula HOM05D005066 ORTHO05D006138 2.4e-09 67.4 169 30.2
Oeu011330.2 Olea europaea HOM05D005066 ORTHO05D006138 2.4e-09 67.4 34 82.4
SalBow7G4394 Salvia bowleyana HOM05D005066 ORTHO05D006138 2.4e-09 67.4 34 85.3
Peaxi162Scf00893g00433 Petunia axillaris HOM05D005066 ORTHO05D006138 3.1e-09 67.0 28 100.0
Duzib093G2109 Durio zibethinus HOM05D005066 ORTHO05D006138 4.0e-09 66.6 169 33.1
Ah.13g072510 Amaranthus hybridus HOM05D005066 ORTHO05D006138 5.3e-09 66.2 35 80.0
AL1G33470 Arabidopsis lyrata HOM05D005066 ORTHO05D006138 5.3e-09 66.2 174 35.1
Cfa014063 Carpinus fangiana HOM05D005066 ORTHO05D006138 5.3e-09 66.2 169 34.9
AUR62036885 Chenopodium quinoa HOM05D005066 ORTHO05D006138 5.3e-09 66.2 34 79.4
HanXRQChr14g0428271 Helianthus annuus HOM05D005066 ORTHO05D006138 5.3e-09 66.2 96 37.5
Lj4C805G13 Lonicera japonica HOM05D005066 ORTHO05D006138 5.3e-09 66.2 34 79.4
arahy.Tifrunner.gnm1.ann1.76XKSK Arachis hypogaea HOM05D005066 ORTHO05D006138 6.9e-09 65.9 171 31.0
arahy.Tifrunner.gnm1.ann1.B8YF15 Arachis hypogaea HOM05D005066 ORTHO05D006138 6.9e-09 65.9 171 31.0
AUR62043921 Chenopodium quinoa HOM05D005066 ORTHO05D006138 6.9e-09 65.9 34 79.4
Dinv31933 Davidia involucrata HOM05D005066 ORTHO05D006138 6.9e-09 65.9 168 34.5
MD15G1002700 Malus domestica HOM05D005066 ORTHO05D006138 6.9e-09 65.9 174 33.3
Solyc04g082300.2 Solanum lycopersicum HOM05D005066 ORTHO05D006138 6.9e-09 65.9 34 82.4
Sopen04g035920 Solanum pennellii HOM05D005066 ORTHO05D006138 6.9e-09 65.9 34 82.4
PGSC0003DMG400009976 Solanum tuberosum HOM05D005066 ORTHO05D006138 6.9e-09 65.9 34 82.4
TPR.G38213 Trifolium pratense HOM05D005066 ORTHO05D006138 6.9e-09 65.9 170 31.2
Nitab4.5_0000588g0150 Nicotiana tabacum HOM05D005066 ORTHO05D006138 9.0e-09 65.5 28 96.4
EL10Ac1g01978 Beta vulgaris HOM05D005066 ORTHO05D006138 1.2e-08 65.1 35 74.3
CiPaw.07G139500 Carya illinoinensis HOM05D005066 ORTHO05D006138 1.2e-08 65.1 164 35.4
Phvul.009G010100 Phaseolus vulgaris HOM05D005066 ORTHO05D006138 1.2e-08 65.1 170 30.0
COL.COLO4_03999 Corchorus olitorius HOM05D005066 ORTHO05D006138 1.5e-08 64.7 163 35.0
CSS0029951 Camellia sinensis var. sinensis HOM05D005066 ORTHO05D006138 2.0e-08 64.3 168 33.9
AUR62043554 Chenopodium quinoa HOM05D005066 ORTHO05D006138 2.6e-08 63.9 34 76.5
Lsat_1_v5_gn_2_6481 Lactuca sativa HOM05D005066 ORTHO05D006138 2.6e-08 63.9 34 73.5
Hund05118 Selenicereus undatus HOM05D005066 ORTHO05D006138 2.6e-08 63.9 34 76.5
VMungo1309G2329 Vigna mungo HOM05D005066 ORTHO05D006138 2.6e-08 63.9 179 30.7
Prupe.1G355000 Prunus persica HOM05D005066 ORTHO05D006138 3.4e-08 63.5 169 33.7
ECA238G2025 Erigeron canadensis HOM05D005066 ORTHO05D006138 4.5e-08 63.2 34 70.6
Thhalv10008062m.g Eutrema salsugineum HOM05D005066 ORTHO05D006138 4.5e-08 63.2 173 34.1
Hma1.2p1_0507F.1_g168410 Hydrangea macrophylla HOM05D005066 ORTHO05D006138 4.5e-08 63.2 90 38.9
AT1G20540 Arabidopsis thaliana HOM05D005066 ORTHO05D006138 5.8e-08 62.8 174 33.3
QL02p013964 Quercus lobata HOM05D005066 ORTHO05D006138 5.8e-08 62.8 35 71.4
Rhsim06G0007900 Rhododendron simsii HOM05D005066 ORTHO05D006138 5.8e-08 62.8 36 69.4
Zm00001eb039840 Zea mays HOM05D005066 ORTHO05D006138 5.8e-08 62.8 52 50.0
ATR0661G259 Amborella trichopoda HOM05D005066 ORTHO05D006138 7.6e-08 62.4 178 32.6
MD08G1003000 Malus domestica HOM05D005066 ORTHO05D006138 7.6e-08 62.4 173 30.6
Thecc.08G057800 Theobroma cacao HOM05D005066 ORTHO05D006138 7.6e-08 62.4 170 31.8
unitig_26.g9893 Utricularia gibba HOM05D005066 ORTHO05D006138 7.6e-08 62.4 34 73.5
BcaB07g32052 Brassica carinata HOM05D005066 ORTHO05D006138 9.9e-08 62.0 176 34.1
Manes.18G005800 Manihot esculenta HOM05D005066 ORTHO05D006138 9.9e-08 62.0 155 27.1
Sp1g18250 Schrenkiella parvula HOM05D005066 ORTHO05D006138 9.9e-08 62.0 173 32.4
Gohir.A05G254700 Gossypium hirsutum HOM05D005066 ORTHO05D006138 1.3e-07 61.6 168 32.1
Sabra05G0193300 Salix brachista HOM05D005066 ORTHO05D006138 1.7e-07 61.2 52 55.8
Aqoxy5G01046 Aquilegia oxysepala HOM05D005066 ORTHO05D006138 2.2e-07 60.8 41 58.5
Ciclev10001617m.g Citrus clementina HOM05D005066 ORTHO05D006138 2.2e-07 60.8 52 57.7
Eucgr.F03549 Eucalyptus grandis HOM05D005066 ORTHO05D006138 2.2e-07 60.8 161 32.3
Potri.005G249800 Populus trichocarpa HOM05D005066 ORTHO05D006138 2.2e-07 60.8 152 31.6
A06p16540 Brassica napus HOM05D005066 ORTHO05D006138 2.9e-07 60.5 172 33.1
BraA06t24760Z Brassica rapa HOM05D005066 ORTHO05D006138 2.9e-07 60.5 172 33.1
Aa31LG7G4800 Aethionema arabicum HOM05D005066 ORTHO05D006138 3.8e-07 60.1 173 31.2
CANSAT25G3513 Cannabis sativa HOM05D005066 ORTHO05D006138 3.8e-07 60.1 35 65.7
PGR031G0259 Punica granatum HOM05D005066 ORTHO05D006138 3.8e-07 60.1 155 25.2
THA.LOC104813757 Tarenaya hassleriana HOM05D005066 ORTHO05D006138 3.8e-07 60.1 172 30.8
Gorai.009G267800 Gossypium raimondii HOM05D005066 ORTHO05D006138 4.9e-07 59.7 162 32.7
Psat5g011560 Pisum sativum HOM05D005066 ORTHO05D006138 4.9e-07 59.7 35 65.7
Carub.0001s2001 Capsella rubella HOM05D005066 ORTHO05D006138 6.4e-07 59.3 174 31.0
Gohir.D05G256300 Gossypium hirsutum HOM05D005066 ORTHO05D006138 6.4e-07 59.3 206 32.0
Potri.002G011200 Populus trichocarpa HOM05D005066 ORTHO05D006138 6.4e-07 59.3 155 26.5
TWI36G1160 Tripterygium wilfordii HOM05D005066 ORTHO05D006138 6.4e-07 59.3 174 31.0
Atru.chr13.151 Acer truncatum HOM05D005066 ORTHO05D006138 8.4e-07 58.9 34 67.6
MBI05_g05143_MAGBIO Magnolia biondii HOM05D005066 ORTHO05D006138 8.4e-07 58.9 34 64.7
Sed0022458 Sechium edule HOM05D005066 ORTHO05D006138 8.4e-07 58.9 171 29.2
ClCG00G005440 Citrullus lanatus HOM05D005066 ORTHO05D006138 1.1e-06 58.5 51 52.9
ClCG08G009490 Citrullus lanatus HOM05D005066 ORTHO05D006138 1.1e-06 58.5 51 52.9
MELO3C026544.2 Cucumis melo HOM05D005066 ORTHO05D006138 1.1e-06 58.5 51 52.9
Os08g0554000 Oryza sativa ssp. japonica HOM05D005066 ORTHO05D006138 1.1e-06 58.5 35 60.0
TAR381G1664 Trochodendron aralioides HOM05D005066 ORTHO05D006138 1.1e-06 58.5 34 70.6
vmacro21823 Vaccinium macrocarpon HOM05D005066 ORTHO05D006138 1.4e-06 58.2 31 67.7
CANSAT54G1628 Cannabis sativa HOM05D005066 ORTHO05D006138 1.9e-06 57.8 36 61.1
Haze_22764 Corylus avellana HOM05D005066 ORTHO05D006138 1.9e-06 57.8 28 78.6
Zm00001eb180420 Zea mays HOM05D005066 ORTHO05D006138 1.9e-06 57.8 191 27.2
BcaC05g25960 Brassica carinata HOM05D005066 ORTHO05D006138 5.5e-06 56.2 172 32.0
Actinidia37971 Actinidia chinensis HOM05D005066 ORTHO05D006138 7.1e-06 55.8 34 67.6


User provided reference genes

Program Settings