Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold274G46507 Striga asiatica HOM05D000861 ORTHO05D004749 3.6e-287 991.1 590 100.0
Migut.C01187 Erythranthe guttata HOM05D000861 ORTHO05D004749 2.8e-146 523.1 358 71.2
MSTRG.26071 Avicennia marina HOM05D000861 ORTHO05D004749 2.8e-138 496.5 594 51.9
Cc09_g02090 Coffea canephora HOM05D000861 ORTHO05D004749 2.9e-135 486.5 388 62.4
vmacro05483 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 8.7e-132 474.9 349 69.3
Dinv25026 Davidia involucrata HOM05D000861 ORTHO05D004749 3.3e-131 473.0 348 65.5
CSS0019173 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 9.7e-131 471.5 392 60.7
Lj2A1153T47 Lonicera japonica HOM05D000861 ORTHO05D004749 4.5e-128 462.6 389 59.9
Rhsim10G0079800 Rhododendron simsii HOM05D000861 ORTHO05D004749 1.0e-127 461.5 349 63.0
Nitab4.5_0000575g0240 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.7e-127 460.7 354 66.4
Peaxi162Scf00072g00619 Petunia axillaris HOM05D000861 ORTHO05D004749 5.0e-127 459.1 409 60.1
Sopen04g019180 Solanum pennellii HOM05D000861 ORTHO05D004749 2.5e-126 456.8 400 58.2
PGSC0003DMG400002212 Solanum tuberosum HOM05D000861 ORTHO05D004749 2.5e-126 456.8 407 56.3
Solyc04g049290.2 Solanum lycopersicum HOM05D000861 ORTHO05D004749 5.5e-126 455.7 400 58.8
Peaxi162Scf00195g00910 Petunia axillaris HOM05D000861 ORTHO05D004749 2.7e-125 453.4 368 63.9
CSS0040474 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 8.8e-124 448.4 325 65.8
unitig_749.g14024 Utricularia gibba HOM05D000861 ORTHO05D004749 2.6e-123 446.8 323 66.6
Solyc04g009600.3 Solanum lycopersicum HOM05D000861 ORTHO05D004749 1.7e-122 444.1 346 67.1
Sopen04g004750 Solanum pennellii HOM05D000861 ORTHO05D004749 2.8e-122 443.4 346 66.8
Sp3g10170 Schrenkiella parvula HOM05D000861 ORTHO05D004749 6.3e-122 442.2 348 60.3
PGSC0003DMG400016019 Solanum tuberosum HOM05D000861 ORTHO05D004749 1.1e-121 441.4 337 67.7
FAN01G1629 Fragaria x ananassa HOM05D000861 ORTHO05D004749 1.8e-121 440.7 337 60.2
Nitab4.5_0007421g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.8e-121 440.7 354 64.7
CAN.G186.36 Capsicum annuum HOM05D000861 ORTHO05D004749 2.4e-121 440.3 342 66.1
GSVIVG01033426001 Vitis vinifera HOM05D000861 ORTHO05D004749 2.4e-121 440.3 355 62.8
RcHm_v2.0_Chr1g0331291 Rosa chinensis HOM05D000861 ORTHO05D004749 3.1e-121 439.9 337 59.9
FvH4_7g05020 Fragaria vesca HOM05D000861 ORTHO05D004749 5.3e-121 439.1 337 60.2
Potri.016G062900 Populus trichocarpa HOM05D000861 ORTHO05D004749 5.3e-121 439.1 348 60.3
QL07p025600 Quercus lobata HOM05D000861 ORTHO05D004749 9.1e-121 438.3 351 64.7
Haze_20079 Corylus avellana HOM05D000861 ORTHO05D004749 2.0e-120 437.2 356 59.3
THA.LOC104826781 Tarenaya hassleriana HOM05D000861 ORTHO05D004749 2.0e-120 437.2 417 54.2
FAN06G3356 Fragaria x ananassa HOM05D000861 ORTHO05D004749 3.4e-120 436.4 337 59.9
Lj1g0012940 Lotus japonicus HOM05D000861 ORTHO05D004749 1.0e-119 434.9 356 57.6
Glyma.19G204100 Glycine max HOM05D000861 ORTHO05D004749 2.2e-119 433.7 401 57.6
Manes.08G039800 Manihot esculenta HOM05D000861 ORTHO05D004749 2.9e-119 433.3 358 58.4
TAR633G2067 Trochodendron aralioides HOM05D000861 ORTHO05D004749 2.9e-119 433.3 357 62.2
FAN10G0630 Fragaria x ananassa HOM05D000861 ORTHO05D004749 3.8e-119 433.0 337 59.3
Glyma.03G206500 Glycine max HOM05D000861 ORTHO05D004749 1.9e-118 430.6 349 62.8
VMungo1383G1884 Vigna mungo HOM05D000861 ORTHO05D004749 3.2e-118 429.9 418 55.0
CiPaw.09G025900 Carya illinoinensis HOM05D000861 ORTHO05D004749 2.1e-117 427.2 353 58.9
Lj1A65T56 Lonicera japonica HOM05D000861 ORTHO05D004749 2.1e-117 427.2 344 58.7
Oeu022105.1 Olea europaea HOM05D000861 ORTHO05D004749 2.1e-117 427.2 357 64.7
TAR636G3394 Trochodendron aralioides HOM05D000861 ORTHO05D004749 2.7e-117 426.8 334 60.8
Oeu003219.1 Olea europaea HOM05D000861 ORTHO05D004749 2.3e-116 423.7 411 58.9
Nn2g14698 Nelumbo nucifera HOM05D000861 ORTHO05D004749 5.2e-116 422.5 350 59.1
Ca_00040_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 8.8e-116 421.8 356 55.6
TWI74G1428 Tripterygium wilfordii HOM05D000861 ORTHO05D004749 7.4e-115 418.7 352 58.5
Psat1g222880 Pisum sativum HOM05D000861 ORTHO05D004749 2.8e-114 416.8 356 55.3
Hma1.2p1_0636F.1_g193240 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 1.4e-113 414.5 308 64.6
CANSAT54G1949 Cannabis sativa HOM05D000861 ORTHO05D004749 7.0e-113 412.1 348 57.2
Haze_04427 Corylus avellana HOM05D000861 ORTHO05D004749 9.1e-113 411.8 355 56.6
Nitab4.5_0008820g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 2.0e-112 410.6 345 61.7
Prupe.2G061200 Prunus persica HOM05D000861 ORTHO05D004749 2.0e-112 410.6 344 56.4
RcHm_v2.0_Chr1g0331341 Rosa chinensis HOM05D000861 ORTHO05D004749 2.6e-112 410.2 309 60.2
Lalb_Chr25g0287681 Lupinus albus HOM05D000861 ORTHO05D004749 3.5e-112 409.8 350 56.9
Medtr1g054715 Medicago truncatula HOM05D000861 ORTHO05D004749 5.9e-112 409.1 380 52.1
Cfa006350 Carpinus fangiana HOM05D000861 ORTHO05D004749 1.0e-111 408.3 355 55.8
Oeu051191.1 Olea europaea HOM05D000861 ORTHO05D004749 1.0e-111 408.3 412 55.8
Lalb_Chr01g0017651 Lupinus albus HOM05D000861 ORTHO05D004749 2.2e-111 407.1 350 58.3
TPR.G14497 Trifolium pratense HOM05D000861 ORTHO05D004749 5.0e-111 406.0 359 54.9
Aqoxy4G02829 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 6.5e-111 405.6 387 51.9
Lalb_Chr20g0111111 Lupinus albus HOM05D000861 ORTHO05D004749 6.5e-111 405.6 350 56.6
CiPaw.10G023500 Carya illinoinensis HOM05D000861 ORTHO05D004749 8.5e-111 405.2 355 56.9
vmacro22548 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 8.5e-111 405.2 349 61.6
Sabra06G0151900 Salix brachista HOM05D000861 ORTHO05D004749 3.2e-110 403.3 392 51.8
Sabra16G0065200 Salix brachista HOM05D000861 ORTHO05D004749 3.2e-110 403.3 354 57.1
Hma1.2p1_0516F.1_g170530 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 4.2e-110 402.9 350 59.4
Manes.09G040600 Manihot esculenta HOM05D000861 ORTHO05D004749 2.1e-109 400.6 311 61.4
TPR.G29255 Trifolium pratense HOM05D000861 ORTHO05D004749 4.7e-109 399.4 404 50.5
HanXRQChr12g0359061 Helianthus annuus HOM05D000861 ORTHO05D004749 8.0e-109 398.7 401 50.1
Psat6g110040 Pisum sativum HOM05D000861 ORTHO05D004749 1.0e-108 398.3 391 50.1
Nn5g30627 Nelumbo nucifera HOM05D000861 ORTHO05D004749 6.7e-108 395.6 322 58.4
Glyma.02G168400 Glycine max HOM05D000861 ORTHO05D004749 2.0e-107 394.0 362 53.3
TPR.G2104 Trifolium pratense HOM05D000861 ORTHO05D004749 2.6e-107 393.7 349 54.2
Lsat_1_v5_gn_2_66000 Lactuca sativa HOM05D000861 ORTHO05D004749 3.3e-107 393.3 355 54.1
BcaB06g25559 Brassica carinata HOM05D000861 ORTHO05D004749 7.5e-107 392.1 366 52.5
ECA234G4058 Erigeron canadensis HOM05D000861 ORTHO05D004749 9.7e-107 391.7 348 53.4
Duzib128G1936 Durio zibethinus HOM05D000861 ORTHO05D004749 6.3e-106 389.0 379 55.7
arahy.Tifrunner.gnm1.ann1.2N6KDB Arachis hypogaea HOM05D000861 ORTHO05D004749 1.4e-105 387.9 388 50.8
arahy.Tifrunner.gnm1.ann1.5F6CY5 Arachis hypogaea HOM05D000861 ORTHO05D004749 1.8e-105 387.5 352 52.8
CsaV3_4G031490 Cucumis sativus L. HOM05D000861 ORTHO05D004749 7.0e-105 385.6 353 53.0
A05p37430 Brassica napus HOM05D000861 ORTHO05D007385 2.7e-104 383.6 341 54.8
MELO3C009074.2 Cucumis melo HOM05D000861 ORTHO05D008567 2.7e-104 383.6 354 52.3
Aqoxy2G01335 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 3.5e-104 383.3 324 56.5
BraA05t22541Z Brassica rapa HOM05D000861 ORTHO05D007385 5.9e-104 382.5 341 54.5
PSO384G1311 Papaver somniferum HOM05D000861 ORTHO05D004749 7.7e-104 382.1 324 57.1
Ciclev10012217m.g Citrus clementina HOM05D000861 ORTHO05D004749 1.3e-103 381.3 310 58.1
BcaC05g29310 Brassica carinata HOM05D000861 ORTHO05D004749 1.7e-103 380.9 341 54.3
Eucgr.A02509 Eucalyptus grandis HOM05D000861 ORTHO05D004749 5.0e-103 379.4 355 52.7
MBI01_g21127_MAGBIO Magnolia biondii HOM05D000861 ORTHO05D004749 1.1e-102 378.3 323 57.6
Ca_26442_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 4.2e-102 376.3 310 60.0
Duzib093G1597 Durio zibethinus HOM05D000861 ORTHO05D004749 7.2e-102 375.6 387 53.7
MD07G1054500 Malus domestica HOM05D000861 ORTHO05D004749 9.4e-102 375.2 344 56.1
arahy.Tifrunner.gnm1.ann1.BI8ZDZ Arachis hypogaea HOM05D000861 ORTHO05D004749 1.2e-101 374.8 359 50.7
C05p55990 Brassica napus HOM05D000861 ORTHO05D004749 2.1e-101 374.0 341 53.4
Sabra16G0064900 Salix brachista HOM05D000861 ORTHO05D004749 2.1e-101 374.0 365 52.9
Thecc.05G180600 Theobroma cacao HOM05D000861 ORTHO05D004749 3.6e-101 373.2 351 57.5
AL3G23550 Arabidopsis lyrata HOM05D000861 ORTHO05D004749 4.7e-101 372.9 404 51.0
arahy.Tifrunner.gnm1.ann1.9W4D6L Arachis hypogaea HOM05D000861 ORTHO05D004749 4.7e-101 372.9 344 52.0
AT3G11950 Arabidopsis thaliana HOM05D000861 ORTHO05D004749 6.1e-101 372.5 348 55.2
COL.COLO4_29438 Corchorus olitorius HOM05D000861 ORTHO05D004749 6.1e-101 372.5 347 56.2
Phvul.007G262800 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 6.1e-101 372.5 349 53.9
PGR004G1046 Punica granatum HOM05D000861 ORTHO05D004749 8.0e-101 372.1 349 53.3
MD02G1263700 Malus domestica HOM05D000861 ORTHO05D004749 1.0e-100 371.7 344 55.8
ClCG04G000550 Citrullus lanatus HOM05D000861 ORTHO05D004749 1.4e-100 371.3 353 51.8
Phvul.001G200100 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 1.4e-100 371.3 310 60.6
CARHR086500 Cardamine hirsuta HOM05D000861 ORTHO05D004749 1.8e-100 370.9 349 55.3
Carub.0003s1128 Capsella rubella HOM05D000861 ORTHO05D004749 7.5e-99 365.5 405 50.1
AUR62025238 Chenopodium quinoa HOM05D000861 ORTHO05D004749 6.3e-98 362.5 397 47.4
Aa31LG3G5570 Aethionema arabicum HOM05D000861 ORTHO05D004749 1.1e-97 361.7 338 53.0
Nitab4.5_0000691g0150 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.4e-97 361.3 340 60.0
Atru.chr8.1223 Acer truncatum HOM05D000861 ORTHO05D004749 1.8e-97 360.9 359 55.4
Thhalv10020413m.g Eutrema salsugineum HOM05D000861 ORTHO05D004749 1.8e-97 360.9 399 50.4
VMungo0720G2154 Vigna mungo HOM05D000861 ORTHO05D004749 4.1e-97 359.8 357 47.9
EL10Ac8g19073 Beta vulgaris HOM05D000861 ORTHO05D004749 5.9e-96 355.9 360 53.3
Lj5g0002775 Lotus japonicus HOM05D000861 ORTHO05D004749 2.8e-93 347.1 390 48.5
Sed0004581 Sechium edule HOM05D000861 ORTHO05D004749 3.6e-93 346.7 345 51.3
Sabra16G0065500 Salix brachista HOM05D000861 ORTHO05D004749 4.7e-93 346.3 366 49.7
BraA03t12899Z Brassica rapa HOM05D000861 ORTHO05D004749 6.1e-93 345.9 398 47.2
Dinv24029 Davidia involucrata HOM05D000861 ORTHO05D004749 6.1e-93 345.9 248 66.5
BcaC01g04070 Brassica carinata HOM05D000861 ORTHO05D007385 2.3e-92 344.0 349 51.6
BolC3t16804H Brassica oleracea HOM05D000861 ORTHO05D004749 2.3e-92 344.0 349 51.6
A03p37380 Brassica napus HOM05D000861 ORTHO05D004749 2.0e-91 340.9 398 47.0
BcaB04g18704 Brassica carinata HOM05D000861 ORTHO05D004749 2.6e-91 340.5 266 60.5
Gohir.A09G130700 Gossypium hirsutum HOM05D000861 ORTHO05D004749 2.6e-91 340.5 375 51.2
Gohir.D01G123600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 7.5e-91 339.0 353 52.4
Gorai.002G154600 Gossypium raimondii HOM05D000861 ORTHO05D004749 7.5e-91 339.0 353 52.7
C03p45380 Brassica napus HOM05D000861 ORTHO05D004749 9.8e-91 338.6 397 47.9
Gohir.A01G136400 Gossypium hirsutum HOM05D000861 ORTHO05D004749 3.7e-90 336.7 353 52.4
CDE05G2486 Ceratophyllum demersum HOM05D000861 ORTHO05D004749 6.3e-90 335.9 338 52.1
Sc13g0002540 Simmondsia chinensis HOM05D000861 ORTHO05D004749 1.6e-88 331.3 396 48.5
DCAR_027450 Daucus carota HOM05D000861 ORTHO05D004749 4.5e-88 329.7 315 52.7
AUR62028947 Chenopodium quinoa HOM05D000861 ORTHO05D004749 5.0e-87 326.2 428 41.1
ATR0789G014 Amborella trichopoda HOM05D000861 ORTHO05D004749 3.3e-86 323.6 307 50.8
Gohir.D09G126600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 4.3e-86 323.2 268 63.1
PSO425G0018 Papaver somniferum HOM05D000861 ORTHO05D004749 2.0e-83 314.3 271 56.8
Cpa.g.sc85.15 Carica papaya HOM05D000861 ORTHO05D004749 9.2e-81 305.4 359 46.8
Ah.09g231540 Amaranthus hybridus HOM05D000861 ORTHO05D004749 3.5e-80 303.5 371 46.1
SHI28323 Sapria himalayana HOM05D000861 ORTHO05D004749 3.0e-79 300.4 319 44.8
Zm00001eb195790 Zea mays HOM05D000861 ORTHO05D004749 1.0e-71 275.4 326 46.3
Os12g0181300 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 7.5e-67 259.2 326 45.4
Gorai.006G145500 Gossypium raimondii HOM05D000861 ORTHO05D004749 2.9e-66 257.3 268 53.7
Os02g0605500 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 1.4e-65 255.0 324 42.6
Os04g0218900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 1.9e-65 254.6 326 45.7
Os05g0305200 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 7.1e-65 252.7 326 45.7
Zm00001eb246660 Zea mays HOM05D000861 ORTHO05D004749 6.0e-64 249.6 327 39.1
Zm00001eb421970 Zea mays HOM05D000861 ORTHO05D004749 1.6e-61 241.5 290 43.4
Zm00001eb093630 Zea mays HOM05D000861 ORTHO05D004749 8.4e-58 229.2 326 42.6
Actinidia01592 Actinidia chinensis HOM05D000861 ORTHO05D004749 4.6e-56 223.4 215 51.2
Mapoly0057s0035 Marchantia polymorpha HOM05D000861 ORTHO05D004749 5.1e-55 219.9 345 33.6
SMO194G0050 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 3.6e-53 213.8 303 40.6
SMO358G0316 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 3.6e-53 213.8 303 40.6
HPP92_008306 Vanilla planifolia HOM05D000861 ORTHO05D004749 8.1e-53 212.6 191 50.3
Pp3c13_13880 Physcomitrium patens HOM05D000861 ORTHO05D004749 7.6e-51 206.1 285 36.8
AagrBONN_evm.TU.Sc2ySwM_228.1074 Anthoceros agrestis HOM05D000861 ORTHO05D004749 4.9e-50 203.4 356 33.4
Pp3c24_6130 Physcomitrium patens HOM05D000861 ORTHO05D004749 4.9e-50 203.4 309 35.3
CBR_g23522 Chara braunii HOM05D000861 ORTHO05D004749 5.6e-46 189.9 294 35.0
SEGI_19220 Sequoiadendron giganteum HOM05D000861 ORTHO05D004749 1.6e-45 188.3 274 35.8
TAR626G0577 Trochodendron aralioides HOM05D000861 ORTHO05D003237 6.2e-45 186.4 135 64.4
SalBow6G1870 Salvia bowleyana HOM05D000861 ORTHO05D004749 8.1e-45 186.0 175 54.9
HPP92_003821 Vanilla planifolia HOM05D000861 ORTHO05D004749 6.9e-44 183.0 191 46.6
Os04g0217900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 4.2e-41 173.7 161 51.6
HPP92_003796 Vanilla planifolia HOM05D000861 ORTHO05D004749 1.9e-38 164.9 158 53.8
TAR626G1779 Trochodendron aralioides HOM05D000861 ORTHO05D004749 2.8e-37 161.0 118 64.4
Nitab4.5_0000691g0180 Nicotiana tabacum HOM05D000861 ORTHO05D004749 3.1e-36 157.5 162 56.8
Actinidia17295 Actinidia chinensis HOM05D000861 ORTHO05D004749 6.4e-34 149.8 240 37.5
TAR371G0304 Trochodendron aralioides HOM05D000861 ORTHO05D003237 7.1e-33 146.4 109 63.3
SMO361G0253 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 3.7e-29 134.0 258 38.4
RcHm_v2.0_Chr3g0486361 Rosa chinensis HOM05D000861 ORTHO05D004749 8.7e-23 112.8 84 56.0
HPP92_003822 Vanilla planifolia HOM05D000861 ORTHO05D004749 4.1e-20 104.0 103 53.4
TAR375G0848 Trochodendron aralioides HOM05D000861 ORTHO05D004749 7.7e-19 99.8 125 43.2
RcHm_v2.0_Chr3g0486481 Rosa chinensis HOM05D000861 ORTHO05D004749 5.5e-17 93.6 58 63.8
RcHm_v2.0_Chr3g0486371 Rosa chinensis HOM05D000861 ORTHO05D004749 7.4e-14 83.2 71 53.5
PRCOL_00002048 Prasinoderma coloniale HOM05D000861 ORTHO05D004749 1.1e-12 79.3 214 31.3
Actinidia38607 Actinidia chinensis HOM05D000861 ORTHO05D004749 5.3e-12 77.0 244 28.7


User provided reference genes

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