Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold270G46313 Striga asiatica HOM05D009041 ORTHO05D010054 1.6e-61 239.2 114 100.0
SGA_v2.0_scaffold115G32155 Striga asiatica HOM05D009041 ORTHO05D010054 4.9e-31 137.9 93 69.9
SGA_v2.0_scaffold548G52852 Striga asiatica HOM05D009041 ORTHO05D010054 4.9e-31 137.9 93 69.9
SGA_v2.0_scaffold6G03390 Striga asiatica HOM05D009041 ORTHO05D010054 1.9e-30 136.0 93 67.7
SGA_v2.0_scaffold13G06721 Striga asiatica HOM05D009041 ORTHO05D010054 7.8e-29 130.6 92 60.9
SGA_v2.0_scaffold26G11342 Striga asiatica HOM05D009041 ORTHO05D010054 7.8e-29 130.6 92 60.9
SGA_v2.0_scaffold11G05825 Striga asiatica HOM05D009041 ORTHO05D010054 1.3e-28 129.8 92 65.2
SGA_v2.0_scaffold5G02531 Striga asiatica HOM05D009041 ORTHO05D010054 1.3e-28 129.8 92 65.2
SGA_v2.0_scaffold47G17570 Striga asiatica HOM05D009041 ORTHO05D010054 3.9e-28 128.3 83 69.9
SGA_v2.0_scaffold25G10890 Striga asiatica HOM05D009041 ORTHO05D010054 5.1e-28 127.9 83 69.9
SGA_v2.0_scaffold180G39666 Striga asiatica HOM05D000045 ORTHO05D010054 8.6e-28 127.1 92 60.9
SGA_v2.0_scaffold21G09437 Striga asiatica HOM05D009041 ORTHO05D010054 3.3e-27 125.2 74 71.6
SGA_v2.0_scaffold63G21825 Striga asiatica HOM05D009041 ORTHO05D010054 4.3e-27 124.8 89 62.9
SGA_v2.0_scaffold160G37740 Striga asiatica HOM05D009041 ORTHO05D010054 9.6e-27 123.6 90 65.6
SGA_v2.0_scaffold668G53413 Striga asiatica HOM05D009041 ORTHO05D010054 3.6e-26 121.7 92 63.0
SGA_v2.0_scaffold79G25579 Striga asiatica HOM05D009041 ORTHO05D010054 4.7e-26 121.3 92 60.9
SGA_v2.0_scaffold130G34321 Striga asiatica HOM05D009041 ORTHO05D010054 6.2e-26 120.9 92 60.9
SGA_v2.0_scaffold366G50039 Striga asiatica HOM05D009041 ORTHO05D010054 1.1e-25 120.2 92 59.8
SGA_v2.0_scaffold21G09336 Striga asiatica HOM05D009041 ORTHO05D010054 5.2e-25 117.9 92 58.7
SGA_v2.0_scaffold211G42151 Striga asiatica HOM05D009041 ORTHO05D010054 2.0e-24 115.9 92 58.7
SGA_v2.0_scaffold347G49563 Striga asiatica HOM05D009041 ORTHO05D010054 1.3e-23 113.2 78 66.7
SGA_v2.0_scaffold46G17333 Striga asiatica HOM05D009041 ORTHO05D010054 3.8e-23 111.7 68 75.0
SGA_v2.0_scaffold147G36271 Striga asiatica HOM05D009041 ORTHO05D010054 2.3e-20 102.4 62 71.0
SGA_v2.0_scaffold249G44954 Striga asiatica HOM05D009041 ORTHO05D010054 2.3e-20 102.4 62 72.6
SGA_v2.0_scaffold18G08321 Striga asiatica HOM05D009041 ORTHO05D010054 2.8e-18 95.5 81 56.8
SGA_v2.0_scaffold142G35653 Striga asiatica HOM05D009041 ORTHO05D010054 6.2e-18 94.4 67 62.7
SGA_v2.0_scaffold577G53016 Striga asiatica HOM05D009041 ORTHO05D010054 1.9e-14 82.8 56 67.9
SGA_v2.0_scaffold86G26862 Striga asiatica HOM05D000045 ORTHO05D010054 5.4e-14 81.3 70 48.6
TPR.G30322 Trifolium pratense HOM05D009041 ORTHO05D010054 6.0e-13 77.8 63 54.0
TPR.G33858 Trifolium pratense HOM05D001572 ORTHO05D000733 1.8e-12 76.3 63 54.0
ECA232G1430 Erigeron canadensis HOM05D000045 ORTHO05D000695 3.3e-11 72.0 89 36.0
EL10Ac5g11838 Beta vulgaris HOM05D000045 ORTHO05D010054 5.6e-11 71.2 90 38.9
ECA240G3819 Erigeron canadensis HOM05D000045 ORTHO05D000067 1.6e-10 69.7 89 34.8
EL10Ac2g03825 Beta vulgaris HOM05D000045 ORTHO05D010054 2.1e-10 69.3 90 37.8
EL10Ac4g09061 Beta vulgaris HOM05D010653 ORTHO05D013151 2.1e-10 69.3 90 37.8
EL10Ac6g15511 Beta vulgaris HOM05D000045 ORTHO05D010054 2.1e-10 69.3 90 37.8
EL10Ac8g19823 Beta vulgaris HOM05D000045 ORTHO05D010054 2.1e-10 69.3 90 37.8
EL10Ac9g21271 Beta vulgaris HOM05D000045 ORTHO05D010054 2.1e-10 69.3 90 37.8
EL10Ac9g22734 Beta vulgaris HOM05D000045 ORTHO05D010054 2.1e-10 69.3 90 37.8
EL10Ac8g19058 Beta vulgaris HOM05D000045 ORTHO05D010054 3.6e-10 68.6 86 38.4
EL10Ac8g19517 Beta vulgaris HOM05D000045 ORTHO05D010054 3.6e-10 68.6 86 38.4
ECA233G1000 Erigeron canadensis HOM05D000045 ORTHO05D000067 3.6e-10 68.6 72 38.9
ECA238G0358 Erigeron canadensis HOM05D000045 ORTHO05D000067 4.8e-10 68.2 89 34.8
EL10Ac1g02190 Beta vulgaris HOM05D000045 ORTHO05D010054 6.2e-10 67.8 90 36.7
Lj5g0021168 Lotus japonicus HOM05D000045 ORTHO05D000695 8.1e-10 67.4 62 43.5
Hund03678 Selenicereus undatus HOM05D004088 ORTHO05D010054 8.1e-10 67.4 87 36.8
SGA_v2.0_scaffold309G48184 Striga asiatica HOM05D014716 ORTHO05D010054 1.8e-09 66.2 62 43.5
EL10Ac1g01865 Beta vulgaris HOM05D000045 ORTHO05D010054 3.1e-09 65.5 68 42.6
EL10Ac5g11586 Beta vulgaris HOM05D000045 ORTHO05D000067 3.1e-09 65.5 70 38.6
EL10Ac6g14806 Beta vulgaris HOM05D000045 ORTHO05D000067 3.1e-09 65.5 70 38.6
HanXRQChr14g0449641 Helianthus annuus HOM05D000045 ORTHO05D000067 3.1e-09 65.5 69 44.9
Medtr6g060410 Medicago truncatula HOM05D009041 ORTHO05D010054 4.0e-09 65.1 61 44.3
EL10Ac5g12499 Beta vulgaris HOM05D000045 ORTHO05D000067 5.3e-09 64.7 70 37.1
EL10Ac8g19696 Beta vulgaris HOM05D000045 ORTHO05D000067 5.3e-09 64.7 70 37.1
SGA_v2.0_scaffold54G19493 Striga asiatica HOM05D009041 ORTHO05D010054 6.9e-09 64.3 56 46.4
EL10Ac2g02717 Beta vulgaris HOM05D000045 ORTHO05D000067 9.0e-09 63.9 70 37.1
EL10Ac3g06581 Beta vulgaris HOM05D000045 ORTHO05D000067 9.0e-09 63.9 70 37.1
EL10Ac6g13792 Beta vulgaris HOM05D000045 ORTHO05D000067 9.0e-09 63.9 70 37.1
EL10Ac9g22455 Beta vulgaris HOM05D010653 ORTHO05D010054 9.0e-09 63.9 86 36.0
EL10As3g23329 Beta vulgaris HOM05D000045 ORTHO05D000067 9.0e-09 63.9 70 37.1
Medtr4g080290 Medicago truncatula HOM05D009041 ORTHO05D010054 1.2e-08 63.5 61 42.6
ECA234G2985 Erigeron canadensis HOM05D003566 ORTHO05D005288 1.5e-08 63.2 73 38.4
ECA236G4481 Erigeron canadensis HOM05D000045 ORTHO05D000067 1.5e-08 63.2 73 38.4
ECA238G1220 Erigeron canadensis HOM05D000045 ORTHO05D000067 1.5e-08 63.2 73 39.7
Hund10326 Selenicereus undatus HOM05D020589 ORTHO05D010054 2.0e-08 62.8 64 40.6
SGA_v2.0_scaffold108G30934 Striga asiatica HOM05D000045 ORTHO05D010054 2.0e-08 62.8 62 45.2
SGA_v2.0_scaffold27G11549 Striga asiatica HOM05D009041 ORTHO05D010054 2.6e-08 62.4 45 64.4
EL10Ac6g13880 Beta vulgaris HOM05D000045 ORTHO05D010054 3.4e-08 62.0 73 38.4
Hund25812 Selenicereus undatus HOM05D000045 ORTHO05D010054 3.4e-08 62.0 64 42.2
EL10Ac2g03240 Beta vulgaris HOM05D000045 ORTHO05D000695 4.5e-08 61.6 69 36.2
EL10Ac4g08127 Beta vulgaris HOM05D000045 ORTHO05D000067 4.5e-08 61.6 69 37.7
EL10Ac1g01220 Beta vulgaris HOM05D000045 ORTHO05D010054 5.8e-08 61.2 68 39.7
EL10Ac4g08128 Beta vulgaris HOM05D000045 ORTHO05D000067 5.8e-08 61.2 69 36.2
EL10Ac4g09892 Beta vulgaris HOM05D000045 ORTHO05D000067 5.8e-08 61.2 69 36.2
EL10Ac5g11529 Beta vulgaris HOM05D000045 ORTHO05D000067 5.8e-08 61.2 69 36.2
EL10Ac6g13927 Beta vulgaris HOM05D000045 ORTHO05D010054 5.8e-08 61.2 69 36.2
Hund31201 Selenicereus undatus HOM05D000045 ORTHO05D000067 5.8e-08 61.2 64 42.2
ECA248G3866 Erigeron canadensis HOM05D000045 ORTHO05D000067 7.6e-08 60.8 69 43.5
HanXRQChr09g0260181 Helianthus annuus HOM05D000045 ORTHO05D010054 7.6e-08 60.8 77 37.7
EL10Ac9g21079 Beta vulgaris HOM05D000045 ORTHO05D000695 9.9e-08 60.5 69 36.2
Hund04144 Selenicereus undatus HOM05D000045 ORTHO05D000695 1.3e-07 60.1 64 40.6
EL10Ac8g19586 Beta vulgaris HOM05D010653 ORTHO05D010054 1.7e-07 59.7 73 38.4
EL10Ac1g01956 Beta vulgaris HOM05D000045 ORTHO05D010054 2.2e-07 59.3 69 34.8
AUR62034412 Chenopodium quinoa HOM05D000575 ORTHO05D000695 6.4e-07 57.8 85 38.8
TPR.G36565 Trifolium pratense HOM05D009041 ORTHO05D010054 6.4e-07 57.8 64 40.6
EL10Ac7g17203 Beta vulgaris HOM05D000045 ORTHO05D010054 8.4e-07 57.4 70 34.3
ECA247G1397 Erigeron canadensis HOM05D000583 ORTHO05D000442 1.1e-06 57.0 67 38.8
Hund04370 Selenicereus undatus HOM05D000045 ORTHO05D000695 1.4e-06 56.6 61 39.3
AUR62035958 Chenopodium quinoa HOM05D009508 ORTHO05D000695 1.9e-06 56.2 81 40.7
Medtr1g013060 Medicago truncatula HOM05D000045 ORTHO05D010054 1.9e-06 56.2 62 37.1
SGA_v2.0_scaffold278G46733 Striga asiatica HOM05D009041 ORTHO05D010054 1.9e-06 56.2 37 73.0
Atru.chr4.2354 Acer truncatum HOM05D000045 ORTHO05D000067 2.4e-06 55.8 64 42.2
ECA240G0952 Erigeron canadensis HOM05D000045 ORTHO05D000067 3.2e-06 55.5 74 37.8
Atru.chr1.251 Acer truncatum HOM05D009041 ORTHO05D019408 4.2e-06 55.1 62 46.8
AUR62026947 Chenopodium quinoa HOM05D009508 ORTHO05D000695 4.2e-06 55.1 92 32.6
AUR62030095 Chenopodium quinoa HOM05D009508 ORTHO05D000695 4.2e-06 55.1 93 32.3
EL10Ac1g01998 Beta vulgaris HOM05D000045 ORTHO05D010054 5.5e-06 54.7 70 34.3
Potri.016G059150 Populus trichocarpa HOM05D000045 ORTHO05D019408 5.5e-06 54.7 52 46.2
Aqoxy5G00013 Aquilegia oxysepala HOM05D000045 ORTHO05D000611 7.1e-06 54.3 88 35.2
Hund09722 Selenicereus undatus HOM05D020589 ORTHO05D010054 7.1e-06 54.3 50 42.0
Aqoxy3G00990 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 9.3e-06 53.9 61 39.3
Aqoxy4G01093 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 9.3e-06 53.9 61 39.3
Aqoxy7G02431 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 9.3e-06 53.9 61 39.3
FvH4_3g29141 Fragaria vesca HOM05D000045 ORTHO05D021070 9.3e-06 53.9 66 42.4
HanXRQChr10g0279971 Helianthus annuus HOM05D000045 ORTHO05D000067 9.3e-06 53.9 79 34.2
PSO170G6512 Papaver somniferum HOM05D000045 ORTHO05D000067 9.3e-06 53.9 52 44.2
PSO210G0651 Papaver somniferum HOM05D000045 ORTHO05D000067 9.3e-06 53.9 52 44.2
Hund08061 Selenicereus undatus HOM05D020589 ORTHO05D010054 9.3e-06 53.9 50 40.0


User provided reference genes

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