Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold260G45885 Striga asiatica HOM05D003104 ORTHO05D003448 2.1e-140 502.3 246 100.0
SGA_v2.0_scaffold83G26428 Striga asiatica HOM05D000003 ORTHO05D051420 2.1e-10 70.5 74 45.9
TAR636G0094 Trochodendron aralioides HOM05D003104 ORTHO05D003448 2.7e-10 70.1 115 42.6
TAR623G0313 Trochodendron aralioides HOM05D003104 ORTHO05D003448 7.9e-10 68.6 112 40.2
Lj9P620T33 Lonicera japonica HOM05D003104 ORTHO05D003448 1.3e-09 67.8 114 40.4
SalBow5G3544 Salvia bowleyana HOM05D003104 ORTHO05D003448 5.1e-09 65.9 107 42.1
SGA_v2.0_scaffold335G49110 Striga asiatica HOM05D001364 ORTHO05D001316 5.1e-09 65.9 52 51.9
Oeu060702.1 Olea europaea HOM05D003104 ORTHO05D003448 1.1e-08 64.7 121 41.3
SGA_v2.0_scaffold14G07070 Striga asiatica HOM05D000003 ORTHO05D000004 1.5e-08 64.3 51 45.1
TAR633G0631 Trochodendron aralioides HOM05D003104 ORTHO05D003448 1.9e-08 63.9 116 37.9
TAR633G2208 Trochodendron aralioides HOM05D003104 ORTHO05D003448 1.9e-08 63.9 116 37.9
SGA_v2.0_scaffold1G00790 Striga asiatica HOM05D010565 ORTHO05D011213 2.5e-08 63.5 52 50.0
GSVIVG01001356001 Vitis vinifera HOM05D003104 ORTHO05D003448 3.3e-08 63.2 118 34.7
Thecc.05G171100 Theobroma cacao HOM05D003104 ORTHO05D003448 7.4e-08 62.0 125 37.6
Cc04_g14660 Coffea canephora HOM05D000003 ORTHO05D000167 9.6e-08 61.6 162 25.9
Oeu024480.1 Olea europaea HOM05D003104 ORTHO05D003448 1.6e-07 60.8 120 39.2
CiPaw.09G030500 Carya illinoinensis HOM05D003104 ORTHO05D003448 2.8e-07 60.1 118 36.4
Migut.B01401 Erythranthe guttata HOM05D003104 ORTHO05D003448 3.7e-07 59.7 120 38.3
Nitab4.5_0002433g0100 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.7e-07 59.7 169 24.3
Potri.006G192100 Populus trichocarpa HOM05D003104 ORTHO05D003448 3.7e-07 59.7 129 36.4
Potri.016G046000 Populus trichocarpa HOM05D003104 ORTHO05D003448 3.7e-07 59.7 118 38.1
Haze_19986 Corylus avellana HOM05D003104 ORTHO05D003448 4.8e-07 59.3 99 39.4
Manes.09G035200 Manihot esculenta HOM05D003104 ORTHO05D003448 4.8e-07 59.3 113 35.4
Duzib093G0308 Durio zibethinus HOM05D003104 ORTHO05D003448 8.1e-07 58.5 113 38.9
SGA_v2.0_scaffold140G35468 Striga asiatica HOM05D023911 ORTHO05D011213 8.1e-07 58.5 53 45.3
SGA_v2.0_scaffold4G02180 Striga asiatica HOM05D000688 ORTHO05D004737 1.1e-06 58.2 64 43.8
Haze_19985 Corylus avellana HOM05D003104 ORTHO05D003448 1.4e-06 57.8 97 38.1
Duzib106G0856 Durio zibethinus HOM05D003104 ORTHO05D003448 1.4e-06 57.8 129 36.4
Gohir.A01G191400 Gossypium hirsutum HOM05D003104 ORTHO05D003448 1.4e-06 57.8 123 35.8
HanXRQChr10g0289851 Helianthus annuus HOM05D003104 ORTHO05D003448 1.4e-06 57.8 87 47.1
Nitab4.5_0013264g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.4e-06 57.8 169 23.1
PGSC0003DMG400023709 Solanum tuberosum HOM05D003104 ORTHO05D003448 1.4e-06 57.8 105 38.1
SGA_v2.0_scaffold380G50369 Striga asiatica HOM05D010565 ORTHO05D011213 2.4e-06 57.0 50 40.0
Hma1.2p1_0128F.1_g059810 Hydrangea macrophylla HOM05D003104 ORTHO05D003448 3.1e-06 56.6 127 37.0
Manes.10G152200 Manihot esculenta HOM05D003104 ORTHO05D003448 3.1e-06 56.6 117 35.9
CSS0036189 Camellia sinensis var. sinensis HOM05D003104 ORTHO05D003448 4.0e-06 56.2 127 38.6
Cfa020167 Carpinus fangiana HOM05D003104 ORTHO05D003448 4.0e-06 56.2 94 37.2
SGA_v2.0_scaffold191G40465 Striga asiatica HOM05D010565 ORTHO05D011213 4.0e-06 56.2 56 42.9
Duzib128G0074 Durio zibethinus HOM05D003104 ORTHO05D003448 5.3e-06 55.8 128 38.3
Prupe.7G076600 Prunus persica HOM05D003104 ORTHO05D003448 5.3e-06 55.8 108 37.0
SalBow6G1610 Salvia bowleyana HOM05D003104 ORTHO05D003448 6.9e-06 55.5 114 38.6
SalBow6G2667 Salvia bowleyana HOM05D003104 ORTHO05D003448 6.9e-06 55.5 114 38.6
Atru.chr8.1107 Acer truncatum HOM05D003104 ORTHO05D003448 9.0e-06 55.1 117 32.5
Atru.chr8.1109 Acer truncatum HOM05D003104 ORTHO05D003448 9.0e-06 55.1 117 32.5
Aqoxy2G00080 Aquilegia oxysepala HOM05D003104 ORTHO05D003448 9.0e-06 55.1 138 31.9
Gohir.A04G055700 Gossypium hirsutum HOM05D003104 ORTHO05D003448 9.0e-06 55.1 114 36.0
Hma1.2p1_0386F.1_g141860 Hydrangea macrophylla HOM05D003104 ORTHO05D003448 9.0e-06 55.1 105 36.2
Lsat_1_v5_gn_9_26201 Lactuca sativa HOM05D003104 ORTHO05D003448 9.0e-06 55.1 91 44.0
Rhsim03G0006200 Rhododendron simsii HOM05D003104 ORTHO05D003448 9.0e-06 55.1 94 41.5


User provided reference genes

Program Settings