Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold25G11136 Striga asiatica HOM05D006616 ORTHO05D008435 5.7e-265 917.1 507 100.0
MSTRG.24176 Avicennia marina HOM05D006616 ORTHO05D008435 5.2e-165 585.1 551 65.2
SalBow2G2978 Salvia bowleyana HOM05D006616 ORTHO05D008435 2.7e-158 562.8 535 60.2
Migut.N03264 Erythranthe guttata HOM05D006616 ORTHO05D008435 2.7e-153 546.2 531 64.2
Oeu038315.2 Olea europaea HOM05D006616 ORTHO05D008435 1.3e-152 543.9 506 67.2
Dinv27270 Davidia involucrata HOM05D006616 ORTHO05D008435 4.4e-140 502.3 462 65.6
Cc10_g12770 Coffea canephora HOM05D006616 ORTHO05D008435 4.1e-138 495.7 468 64.7
Hma1.2p1_2178F.1_g316210 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 2.9e-131 473.0 464 61.6
Peaxi162Scf00066g00130 Petunia axillaris HOM05D006616 ORTHO05D008435 4.1e-130 469.2 476 61.8
Actinidia03423 Actinidia chinensis HOM05D006616 ORTHO05D008435 1.3e-128 464.2 474 60.1
CAN.G526.15 Capsicum annuum HOM05D006616 ORTHO05D008435 8.6e-128 461.5 522 56.9
CSS0027023 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 3.3e-127 459.5 452 62.6
Rhsim11G0071400 Rhododendron simsii HOM05D006616 ORTHO05D008435 4.3e-127 459.1 518 57.3
Potri.006G032200 Populus trichocarpa HOM05D006616 ORTHO05D008435 7.3e-127 458.4 444 61.7
TAR622G0026 Trochodendron aralioides HOM05D006616 ORTHO05D008435 1.2e-126 457.6 507 58.2
GSVIVG01025818001 Vitis vinifera HOM05D006616 ORTHO05D008435 1.1e-125 454.5 467 62.1
Atru.chr1.1509 Acer truncatum HOM05D006616 ORTHO05D008435 1.8e-125 453.8 457 60.6
arahy.Tifrunner.gnm1.ann1.QA0LD5 Arachis hypogaea HOM05D006616 ORTHO05D008435 1.9e-122 443.7 517 56.9
HanXRQChr05g0149371 Helianthus annuus HOM05D006616 ORTHO05D008435 3.2e-122 443.0 496 56.9
Sabra06G0021500 Salix brachista HOM05D006616 ORTHO05D008435 9.2e-122 441.4 444 60.4
arahy.Tifrunner.gnm1.ann1.958W0C Arachis hypogaea HOM05D006616 ORTHO05D008435 3.5e-121 439.5 517 56.5
CANSAT78G0100 Cannabis sativa HOM05D006616 ORTHO05D008435 6.0e-121 438.7 511 56.8
Hund19065 Selenicereus undatus HOM05D006616 ORTHO05D008435 6.0e-121 438.7 458 61.1
PGR042G1816 Punica granatum HOM05D006616 ORTHO05D008435 1.3e-120 437.6 525 56.0
Eucgr.A02183 Eucalyptus grandis HOM05D006616 ORTHO05D008435 2.3e-120 436.8 451 61.2
Prupe.7G020500 Prunus persica HOM05D006616 ORTHO05D008435 3.0e-120 436.4 514 56.6
ECA246G4188 Erigeron canadensis HOM05D006616 ORTHO05D008435 3.9e-120 436.0 543 53.8
Ca_02795_v3 Cicer arietinum L. HOM05D006616 ORTHO05D008435 4.3e-119 432.6 531 54.4
VMungo0720G0485 Vigna mungo HOM05D006616 ORTHO05D008435 5.6e-119 432.2 532 54.5
TWI74G0800 Tripterygium wilfordii HOM05D006616 ORTHO05D008435 2.8e-118 429.9 457 59.5
Lj5g0015037 Lotus japonicus HOM05D006616 ORTHO05D008435 1.1e-117 427.9 519 54.7
MBI16_g32949_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 6.8e-117 425.2 463 57.9
CSS0040058 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 1.2e-116 424.5 512 55.3
Aqoxy3G00148 Aquilegia oxysepala HOM05D006616 ORTHO05D008435 3.4e-116 422.9 473 57.7
unitig_52.g17546 Utricularia gibba HOM05D006616 ORTHO05D008435 3.4e-116 422.9 511 55.2
Phvul.007G243700 Phaseolus vulgaris HOM05D006616 ORTHO05D008435 5.8e-116 422.2 476 55.3
Solyc11g005110.3 Solanum lycopersicum HOM05D006616 ORTHO05D008435 7.6e-116 421.8 455 60.0
Ah.13g077310 Amaranthus hybridus HOM05D006616 ORTHO05D008435 8.4e-115 418.3 457 57.1
Sopen11g001110 Solanum pennellii HOM05D006616 ORTHO05D008435 8.4e-115 418.3 533 54.4
TPR.G13802 Trifolium pratense HOM05D006616 ORTHO05D008435 1.1e-114 417.9 451 58.3
Lalb_Chr21g0316821 Lupinus albus HOM05D006616 ORTHO05D008435 1.4e-114 417.5 522 54.0
Thecc.05G123900 Theobroma cacao HOM05D006616 ORTHO05D008435 1.4e-114 417.5 462 55.6
ATR0326G030 Amborella trichopoda HOM05D006616 ORTHO05D008435 1.9e-114 417.2 468 56.0
Cfa019948 Carpinus fangiana HOM05D006616 ORTHO05D008435 1.9e-114 417.2 468 58.1
Lj7A350T24 Lonicera japonica HOM05D006616 ORTHO05D008435 4.1e-114 416.0 539 47.7
MD00G1150000 Malus domestica HOM05D006616 ORTHO05D008435 4.1e-114 416.0 531 52.7
Aa31LG3G1010 Aethionema arabicum HOM05D006616 ORTHO05D008435 9.2e-114 414.8 452 57.5
Manes.09G002500 Manihot esculenta HOM05D006616 ORTHO05D008435 9.2e-114 414.8 446 59.2
Gohir.A11G305800 Gossypium hirsutum HOM05D006616 ORTHO05D008435 1.6e-113 414.1 448 56.7
THA.LOC104815412 Tarenaya hassleriana HOM05D006616 ORTHO05D008435 3.5e-113 412.9 469 59.3
CiPaw.10G044000 Carya illinoinensis HOM05D006616 ORTHO05D008435 7.8e-113 411.8 489 56.0
Duzib128G1745 Durio zibethinus HOM05D006616 ORTHO05D008435 8.6e-112 408.3 461 54.7
Nn3g18184 Nelumbo nucifera HOM05D006616 ORTHO05D008435 8.6e-112 408.3 458 59.6
PSO478G1375 Papaver somniferum HOM05D006616 ORTHO05D008435 8.6e-112 408.3 478 55.2
Glyma.02G162000 Glycine max HOM05D006616 ORTHO05D008435 1.1e-111 407.9 485 56.7
AUR62018417 Chenopodium quinoa HOM05D006616 ORTHO05D008435 1.9e-111 407.1 489 54.4
Zm00001eb364810 Zea mays HOM05D006616 ORTHO05D008435 3.3e-111 406.4 512 53.1
AUR62021025 Chenopodium quinoa HOM05D006616 ORTHO05D008435 5.6e-111 405.6 480 55.6
Os01g0916300 Oryza sativa ssp. japonica HOM05D006616 ORTHO05D008435 7.3e-111 405.2 516 51.2
Medtr1g051155 Medicago truncatula HOM05D006616 ORTHO05D008435 1.2e-110 404.4 453 57.6
Gorai.007G351400 Gossypium raimondii HOM05D006616 ORTHO05D008435 3.6e-110 402.9 449 56.3
Psat6g087360 Pisum sativum HOM05D006616 ORTHO05D008435 4.7e-110 402.5 456 57.0
RcHm_v2.0_Chr3g0494671 Rosa chinensis HOM05D006616 ORTHO05D008435 6.2e-110 402.1 480 55.2
CDE04G3611 Ceratophyllum demersum HOM05D006616 ORTHO05D008435 2.4e-109 400.2 450 59.1
Gohir.D11G321200 Gossypium hirsutum HOM05D006616 ORTHO05D008435 2.4e-109 400.2 448 56.0
QL07p014063 Quercus lobata HOM05D006616 ORTHO05D008435 4.0e-109 399.4 537 50.7
HPP92_023122 Vanilla planifolia HOM05D006616 ORTHO05D008435 5.2e-109 399.1 488 52.5
AL4G39000 Arabidopsis lyrata HOM05D006616 ORTHO05D008435 3.8e-107 392.9 474 54.4
Sp4g23340 Schrenkiella parvula HOM05D006616 ORTHO05D008435 7.1e-106 388.7 466 54.9
EL10Ac3g07308 Beta vulgaris HOM05D006616 ORTHO05D008435 1.6e-105 387.5 460 56.3
AT2G41020 Arabidopsis thaliana HOM05D006616 ORTHO05D008435 2.1e-105 387.1 466 55.4
FAN26G1972 Fragaria x ananassa HOM05D006616 ORTHO05D008435 1.3e-104 384.4 462 56.5
Thhalv10002504m.g Eutrema salsugineum HOM05D006616 ORTHO05D008435 1.7e-104 384.0 499 52.5
Ciclev10011646m.g Citrus clementina HOM05D006616 ORTHO05D008435 6.6e-104 382.1 477 53.7
CsaV3_3G040470 Cucumis sativus L. HOM05D006616 ORTHO05D008435 1.3e-102 377.9 495 55.2
DCAR_014373 Daucus carota HOM05D006616 ORTHO05D008435 2.1e-102 377.1 444 56.3
Sed0024074 Sechium edule HOM05D006616 ORTHO05D008435 2.8e-102 376.7 559 48.3
FAN28G1824 Fragaria x ananassa HOM05D006616 ORTHO05D008435 8.1e-102 375.2 459 55.3
BcaC02g12875 Brassica carinata HOM05D006616 ORTHO05D008435 3.1e-101 373.2 449 55.2
Carub.0004s2335 Capsella rubella HOM05D006616 ORTHO05D008435 3.1e-101 373.2 459 57.7
C04p68740 Brassica napus HOM05D006616 ORTHO05D008435 6.9e-101 372.1 449 55.2
FAN19G2668 Fragaria x ananassa HOM05D006616 ORTHO05D008435 9.9e-100 368.2 463 54.2
BraA04t18591Z Brassica rapa HOM05D006616 ORTHO05D002641 2.7e-97 360.1 442 54.8
A04p31340 Brassica napus HOM05D006616 ORTHO05D002641 7.9e-97 358.6 442 55.0
BolC4t28379H Brassica oleracea HOM05D006616 ORTHO05D008435 1.3e-96 357.8 442 54.3
PSO017G2359 Papaver somniferum HOM05D006616 ORTHO05D008435 7.3e-95 352.1 389 57.1
CARHR136140 Cardamine hirsuta HOM05D006616 ORTHO05D008435 1.1e-93 348.2 421 55.3
Nitab4.5_0001168g0150 Nicotiana tabacum HOM05D006616 ORTHO05D008435 1.1e-93 348.2 564 42.0
Lsat_1_v5_gn_6_110180 Lactuca sativa HOM05D006616 ORTHO05D008435 1.5e-92 344.4 558 48.0
Pp3c10_1890 Physcomitrium patens HOM05D006616 ORTHO05D008435 5.6e-87 325.9 538 47.6
Pp3c10_1896 Physcomitrium patens HOM05D006616 ORTHO05D008435 5.6e-87 325.9 538 47.6
Mapoly0043s0041 Marchantia polymorpha HOM05D006616 ORTHO05D008435 6.0e-81 305.8 561 43.3
ClCG10G015990 Citrullus lanatus HOM05D006616 ORTHO05D008435 2.8e-78 297.0 475 51.8
FvH4_1g29230 Fragaria vesca HOM05D006616 ORTHO05D008435 4.8e-78 296.2 447 50.3
Haze_20291 Corylus avellana HOM05D006616 ORTHO05D008435 3.0e-72 276.9 734 36.4
MELO3C009780.2 Cucumis melo HOM05D006616 ORTHO05D008435 4.1e-69 266.5 584 40.4
Nitab4.5_0003863g0020 Nicotiana tabacum HOM05D006616 ORTHO05D008435 2.6e-55 220.7 253 49.8
Hma1.2p1_2178F.1_g316200 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 4.4e-47 193.4 265 46.0
Sc13g0000840 Simmondsia chinensis HOM05D006616 ORTHO05D008435 7.5e-47 192.6 283 46.3
AagrBONN_evm.TU.Sc2ySwM_228.200 Anthoceros agrestis HOM05D006616 ORTHO05D008435 2.2e-46 191.0 286 41.3
SEGI_15760 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 1.8e-45 188.0 155 65.8
Cpa.g.sc33.190 Carica papaya HOM05D006616 ORTHO05D008435 2.2e-43 181.0 215 49.3
Nitab4.5_0003863g0030 Nicotiana tabacum HOM05D006616 ORTHO05D008435 6.5e-43 179.5 283 43.8
SEGI_28853 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 4.7e-41 173.3 356 43.0
Actinidia25416 Actinidia chinensis HOM05D006616 ORTHO05D008435 7.7e-36 156.0 217 43.8
SMO339G0010 Selaginella moellendorffii HOM05D006616 ORTHO05D008435 5.5e-34 149.8 98 77.6
COL.COLO4_33517 Corchorus olitorius HOM05D006616 ORTHO05D008435 1.5e-31 141.7 160 50.6
vmacro00862 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 2.6e-31 141.0 110 68.2
FAN23G2418 Fragaria x ananassa HOM05D006616 ORTHO05D008435 7.5e-31 139.4 82 89.0
CBR_g8767 Chara braunii HOM05D006616 ORTHO05D008435 2.2e-30 137.9 410 36.1
Migut.C01363 Erythranthe guttata HOM05D006616 ORTHO05D008435 1.1e-29 135.6 167 50.9
Psat7g065560 Pisum sativum HOM05D006616 ORTHO05D008435 2.8e-25 120.9 143 49.7
Psat1g016240 Pisum sativum HOM05D006616 ORTHO05D008435 8.0e-25 119.4 155 47.1
SHI24850 Sapria himalayana HOM05D006616 ORTHO05D008435 1.5e-23 115.2 146 44.5
vmacro00863 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 3.2e-21 107.5 135 48.1
Actinidia29490 Actinidia chinensis HOM05D006616 ORTHO05D008435 8.9e-16 89.4 94 52.1
MCO09G511 Micromonas commoda HOM05D006616 ORTHO05D008435 8.9e-16 89.4 337 38.0
Cre12.g527600 Chlamydomonas reinhardtii HOM05D006616 ORTHO05D008435 4.4e-15 87.0 71 62.0
PSO478G1191 Papaver somniferum HOM05D006616 ORTHO05D008435 8.3e-14 82.8 167 43.1
MBI16_g47221_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 1.6e-12 78.6 178 36.5
BcaC02g07966 Brassica carinata HOM05D001681 ORTHO05D001589 5.6e-10 70.1 50 72.0


User provided reference genes

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