Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold25G11065 Striga asiatica HOM05D000003 ORTHO05D000004 2.0e-146 522.3 250 100.0
SGA_v2.0_scaffold64G21963 Striga asiatica HOM05D000003 ORTHO05D000004 2.0e-13 80.5 65 44.6
SGA_v2.0_scaffold279G46783 Striga asiatica HOM05D005209 ORTHO05D006188 2.3e-12 77.0 66 53.0
SGA_v2.0_scaffold43G16501 Striga asiatica HOM05D000007 ORTHO05D021020 4.7e-10 69.3 64 48.4
SGA_v2.0_scaffold104G30166 Striga asiatica HOM05D000003 ORTHO05D000004 8.0e-10 68.6 66 42.4
SGA_v2.0_scaffold380G50369 Striga asiatica HOM05D010565 ORTHO05D011213 8.0e-10 68.6 69 43.5
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 6.8e-09 65.5 66 42.4
SGA_v2.0_scaffold5G02882 Striga asiatica HOM05D001043 ORTHO05D001555 6.8e-09 65.5 67 46.3
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 1.2e-08 64.7 67 47.8
Psat1g186320 Pisum sativum HOM05D000003 ORTHO05D000004 2.0e-08 63.9 110 31.8
SGA_v2.0_scaffold299G47717 Striga asiatica HOM05D000003 ORTHO05D000004 7.5e-08 62.0 70 37.1
SGA_v2.0_scaffold14G07070 Striga asiatica HOM05D000003 ORTHO05D000004 1.3e-07 61.2 63 44.4
SGA_v2.0_scaffold118G32446 Striga asiatica HOM05D000003 ORTHO05D000004 1.7e-07 60.8 65 41.5
Nn2g13431 Nelumbo nucifera HOM05D000003 ORTHO05D000004 2.8e-07 60.1 64 34.4
FvH4_2g19503 Fragaria vesca HOM05D000003 ORTHO05D006737 4.9e-07 59.3 73 38.4
PSO591G0286 Papaver somniferum HOM05D000003 ORTHO05D000004 4.9e-07 59.3 64 40.6
PSO339G4589 Papaver somniferum HOM05D000003 ORTHO05D001026 8.3e-07 58.5 64 43.8
Nn5g29920 Nelumbo nucifera HOM05D000003 ORTHO05D000004 1.1e-06 58.2 64 35.9
Sed0020565 Sechium edule HOM05D000003 ORTHO05D000004 1.1e-06 58.2 68 39.7
Sed0007969 Sechium edule HOM05D000003 ORTHO05D000004 1.4e-06 57.8 66 37.9
CANSAT35G1614 Cannabis sativa HOM05D000003 ORTHO05D000004 2.4e-06 57.0 110 28.2
COL.COLO4_04272 Corchorus olitorius HOM05D000003 ORTHO05D000004 2.4e-06 57.0 84 31.0
SGA_v2.0_scaffold382G50402 Striga asiatica HOM05D000003 ORTHO05D000004 2.4e-06 57.0 65 33.8
COL.COLO4_04468 Corchorus olitorius HOM05D000003 ORTHO05D000004 3.1e-06 56.6 77 37.7
AUR62018115 Chenopodium quinoa HOM05D000003 ORTHO05D000004 4.1e-06 56.2 65 40.0
SGA_v2.0_scaffold244G44341 Striga asiatica HOM05D000003 ORTHO05D000004 4.1e-06 56.2 84 31.0
Sed0024608 Sechium edule HOM05D015416 ORTHO05D023128 5.4e-06 55.8 66 36.4
SGA_v2.0_scaffold122G33296 Striga asiatica HOM05D000003 ORTHO05D000004 5.4e-06 55.8 63 39.7
COL.COLO4_16479 Corchorus olitorius HOM05D020344 ORTHO05D012846 7.0e-06 55.5 76 36.8
QL05p062712 Quercus lobata HOM05D000003 ORTHO05D000004 7.0e-06 55.5 64 43.8
SGA_v2.0_scaffold4G02180 Striga asiatica HOM05D000688 ORTHO05D004737 7.0e-06 55.5 69 40.6
arahy.Tifrunner.gnm1.ann1.4I74IV Arachis hypogaea HOM05D000003 ORTHO05D000004 9.2e-06 55.1 67 34.3


User provided reference genes

Program Settings