Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold258G45755 Striga asiatica HOM05D020517 ORTHO05D011398 4.8e-64 247.7 125 100.0
SGA_v2.0_scaffold148G36450 Striga asiatica HOM05D020517 ORTHO05D000009 4.1e-47 191.4 117 83.8
SGA_v2.0_scaffold309G48127 Striga asiatica HOM05D020517 ORTHO05D011398 2.3e-34 149.1 76 94.7
SGA_v2.0_scaffold62G21612 Striga asiatica HOM05D020517 ORTHO05D011398 4.0e-18 95.1 57 82.5
Manes.03G090444 Manihot esculenta HOM05D000030 ORTHO05D000009 6.2e-11 71.2 92 35.9
Manes.13G077247 Manihot esculenta HOM05D000030 ORTHO05D000009 6.2e-11 71.2 99 36.4
Manes.17G029905 Manihot esculenta HOM05D000030 ORTHO05D000009 6.2e-11 71.2 73 42.5
Manes.03G090703 Manihot esculenta HOM05D000030 ORTHO05D000009 2.3e-10 69.3 94 34.0
SGA_v2.0_scaffold61G21151 Striga asiatica HOM05D025682 ORTHO05D404536 1.2e-09 67.0 63 57.1
Manes.02G168901 Manihot esculenta HOM05D000030 ORTHO05D000009 4.4e-09 65.1 93 34.4
Sopen03g023750 Solanum pennellii HOM05D000030 ORTHO05D000009 5.8e-09 64.7 83 37.3
Gorai.013G077200 Gossypium raimondii HOM05D000030 ORTHO05D000009 7.5e-09 64.3 117 33.3
Manes.01G057350 Manihot esculenta HOM05D000030 ORTHO05D000009 7.5e-09 64.3 93 34.4
Manes.06G026760 Manihot esculenta HOM05D000030 ORTHO05D000009 7.5e-09 64.3 93 34.4
Manes.11G097150 Manihot esculenta HOM05D000030 ORTHO05D000031 7.5e-09 64.3 74 36.5
Manes.13G073701 Manihot esculenta HOM05D000030 ORTHO05D000009 7.5e-09 64.3 93 34.4
SGA_v2.0_scaffold370G50130 Striga asiatica HOM05D000030 ORTHO05D000009 9.9e-09 63.9 90 44.4
Rhsim06G0136800 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.3e-08 63.5 126 34.9
Manes.13G119650 Manihot esculenta HOM05D000030 ORTHO05D000009 1.7e-08 63.2 93 34.4
Manes.02G223133 Manihot esculenta HOM05D000030 ORTHO05D000009 2.2e-08 62.8 93 35.5
Manes.02G223166 Manihot esculenta HOM05D000030 ORTHO05D000009 2.2e-08 62.8 93 35.5
Manes.12G071950 Manihot esculenta HOM05D000030 ORTHO05D000009 2.2e-08 62.8 93 35.5
CiPaw.01G071900 Carya illinoinensis HOM05D000030 ORTHO05D000009 3.7e-08 62.0 129 34.1
Gorai.002G232100 Gossypium raimondii HOM05D000030 ORTHO05D000009 3.7e-08 62.0 114 35.1
Manes.16G057109 Manihot esculenta HOM05D000030 ORTHO05D000009 3.7e-08 62.0 93 32.3
Nitab4.5_0004608g0020 Nicotiana tabacum HOM05D011551 ORTHO05D013890 3.7e-08 62.0 93 35.5
AUR62025958 Chenopodium quinoa HOM05D000030 ORTHO05D000009 4.9e-08 61.6 92 38.0
Gorai.005G104500 Gossypium raimondii HOM05D000030 ORTHO05D000009 4.9e-08 61.6 122 34.4
Manes.14G165250 Manihot esculenta HOM05D000030 ORTHO05D000009 4.9e-08 61.6 79 36.7
Manes.17G003183 Manihot esculenta HOM05D000030 ORTHO05D000009 4.9e-08 61.6 73 39.7
Nitab4.5_0000045g0210 Nicotiana tabacum HOM05D009060 ORTHO05D011398 4.9e-08 61.6 54 55.6
Ah.16g101830 Amaranthus hybridus HOM05D000001 ORTHO05D001705 6.4e-08 61.2 109 38.5
Sopen03g009380 Solanum pennellii HOM05D000030 ORTHO05D000009 6.4e-08 61.2 69 43.5
AUR62033451 Chenopodium quinoa HOM05D000030 ORTHO05D000009 8.3e-08 60.8 92 37.0
Solyc07g049405.1 Solanum lycopersicum HOM05D000030 ORTHO05D000009 8.3e-08 60.8 66 43.9
CSS0008746 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.1e-07 60.5 109 34.9
CSS0048534 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000031 1.1e-07 60.5 83 43.4
Solyc09g063157.2 Solanum lycopersicum HOM05D000030 ORTHO05D000009 1.1e-07 60.5 69 43.5
Sopen01g026300 Solanum pennellii HOM05D000030 ORTHO05D000009 1.1e-07 60.5 69 43.5
Sopen11g012600 Solanum pennellii HOM05D000030 ORTHO05D000009 1.1e-07 60.5 69 43.5
Sopen12g016160 Solanum pennellii HOM05D000030 ORTHO05D000009 1.1e-07 60.5 67 44.8
CSS0039703 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.4e-07 60.1 117 34.2
AUR62000403 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.9e-07 59.7 92 37.0
AUR62004041 Chenopodium quinoa HOM05D000030 ORTHO05D001854 1.9e-07 59.7 92 37.0
AUR62006514 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.9e-07 59.7 92 37.0
AUR62007678 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.9e-07 59.7 119 31.9
AUR62008999 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.9e-07 59.7 92 37.0
AUR62019509 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.9e-07 59.7 92 37.0
AUR62021622 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.9e-07 59.7 92 37.0
AUR62022740 Chenopodium quinoa HOM05D000080 ORTHO05D000009 1.9e-07 59.7 119 31.9
AUR62030964 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.9e-07 59.7 92 37.0
AUR62031352 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.9e-07 59.7 92 37.0
AUR62033069 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.9e-07 59.7 92 37.0
AUR62035766 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.9e-07 59.7 92 37.0
AUR62037810 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.9e-07 59.7 92 37.0
AUR62039590 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.9e-07 59.7 92 37.0
AUR62041067 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.9e-07 59.7 92 37.0
AUR62041768 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.9e-07 59.7 92 37.0
AUR62043433 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.9e-07 59.7 92 37.0
Manes.02G205650 Manihot esculenta HOM05D000030 ORTHO05D000009 1.9e-07 59.7 74 35.1
Solyc11g150102.1 Solanum lycopersicum HOM05D000030 ORTHO05D000009 1.9e-07 59.7 86 37.2
CiPaw.03G002200 Carya illinoinensis HOM05D000030 ORTHO05D000009 2.4e-07 59.3 124 33.1
AUR62028159 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.2e-07 58.9 92 37.0
AUR62040473 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.2e-07 58.9 92 37.0
AUR62041820 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.2e-07 58.9 92 37.0
Manes.02G217650 Manihot esculenta HOM05D000030 ORTHO05D000009 4.1e-07 58.5 104 29.8
SGA_v2.0_scaffold10G05123 Striga asiatica HOM05D000030 ORTHO05D000009 5.4e-07 58.2 111 36.9
CSS0004161 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 7.1e-07 57.8 74 37.8
CSS0031978 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000031 7.1e-07 57.8 78 42.3
AUR62033173 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.1e-07 57.8 92 35.9
Ah.12g059630 Amaranthus hybridus HOM05D000030 ORTHO05D000009 9.2e-07 57.4 122 36.9
AUR62018971 Chenopodium quinoa HOM05D000030 ORTHO05D000009 9.2e-07 57.4 92 35.9
Hma1.2p1_0357F.1_g134210 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 9.2e-07 57.4 117 31.6
Manes.16G104301 Manihot esculenta HOM05D000030 ORTHO05D000009 9.2e-07 57.4 107 32.7
QL06p035328 Quercus lobata HOM05D000030 ORTHO05D000009 9.2e-07 57.4 104 34.6
QL10p045275 Quercus lobata HOM05D000030 ORTHO05D000009 9.2e-07 57.4 104 34.6
QL12p026216 Quercus lobata HOM05D000030 ORTHO05D000009 9.2e-07 57.4 104 34.6
TWI53G1182 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 9.2e-07 57.4 108 33.3
TWI81G0317 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 9.2e-07 57.4 108 33.3
AUR62029768 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.0 92 35.9
AUR62038248 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.0 92 35.9
AUR62040472 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.0 92 34.8
Gorai.007G156600 Gossypium raimondii HOM05D000030 ORTHO05D000009 1.2e-06 57.0 95 33.7
Nitab4.5_0000855g0070 Nicotiana tabacum HOM05D009060 ORTHO05D011398 1.2e-06 57.0 61 45.9
AUR62018253 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.6e-06 56.6 116 33.6
Manes.13G091744 Manihot esculenta HOM05D000030 ORTHO05D000009 1.6e-06 56.6 104 29.8
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.6e-06 56.6 132 31.8
QL04p060590 Quercus lobata HOM05D000030 ORTHO05D000009 2.1e-06 56.2 104 33.7
CSS0049125 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000031 2.7e-06 55.8 83 41.0
AUR62000342 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.7e-06 55.8 77 39.0
AUR62002170 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.7e-06 55.8 77 39.0
AUR62002667 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.7e-06 55.8 77 39.0
AUR62005031 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.7e-06 55.8 77 39.0
AUR62005730 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.7e-06 55.8 77 39.0
AUR62009853 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.7e-06 55.8 77 39.0
AUR62010088 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.7e-06 55.8 77 39.0
AUR62015065 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.7e-06 55.8 77 39.0
AUR62015407 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.7e-06 55.8 77 39.0
AUR62016676 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.7e-06 55.8 77 39.0
AUR62017173 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.7e-06 55.8 77 39.0
AUR62018138 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.7e-06 55.8 77 39.0
AUR62020310 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.7e-06 55.8 77 39.0
AUR62022944 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.7e-06 55.8 77 39.0
AUR62022996 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.7e-06 55.8 77 39.0
AUR62023960 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.7e-06 55.8 77 39.0
AUR62025024 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.7e-06 55.8 77 39.0
AUR62025491 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.7e-06 55.8 77 39.0
AUR62028140 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.7e-06 55.8 77 39.0
AUR62028487 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.7e-06 55.8 77 39.0
AUR62029206 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.7e-06 55.8 77 39.0
AUR62029825 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.7e-06 55.8 77 39.0
AUR62032482 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.7e-06 55.8 77 39.0
AUR62034112 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.7e-06 55.8 77 39.0
AUR62037624 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.7e-06 55.8 77 39.0
AUR62038281 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.7e-06 55.8 77 39.0
AUR62038973 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.7e-06 55.8 77 39.0
AUR62040597 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.7e-06 55.8 77 39.0
AUR62042148 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.7e-06 55.8 77 39.0
AUR62043566 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.7e-06 55.8 77 39.0
AUR62044260 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.7e-06 55.8 77 39.0
TWI53G0809 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 2.7e-06 55.8 108 32.4
CSS0017747 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000031 3.5e-06 55.5 75 42.7
AUR62008899 Chenopodium quinoa HOM05D000030 ORTHO05D000031 3.5e-06 55.5 116 33.6
AUR62028908 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.5e-06 55.5 94 36.2
AUR62040565 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.5e-06 55.5 116 33.6
Hma1.2p1_0070F.1_g037660 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 3.5e-06 55.5 82 36.6
Hma1.2p1_0613F.1_g189240 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 3.5e-06 55.5 82 36.6
AUR62026612 Chenopodium quinoa HOM05D000030 ORTHO05D000009 4.6e-06 55.1 102 33.3
Hma1.2p1_0572F.1_g181290 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 4.6e-06 55.1 77 37.7
AUR62024927 Chenopodium quinoa HOM05D000030 ORTHO05D000009 6.0e-06 54.7 116 36.2
Hma1.2p1_0283F.1_g113600 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 6.0e-06 54.7 85 35.3
Rhsim10G0102100 Rhododendron simsii HOM05D000030 ORTHO05D000009 6.0e-06 54.7 75 38.7
AUR62031378 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.8e-06 54.3 116 33.6
Hma1.2p1_0663F.1_g198780 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 7.8e-06 54.3 83 37.3
PGSC0003DMG400016410 Solanum tuberosum HOM05D000030 ORTHO05D000009 7.8e-06 54.3 102 33.3


User provided reference genes

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