Gene: Ah.16g101830

General Information

Structural Information

Species Amaranthus hybridus
Gene Identifier Ah.16g101830
Transcript Identifier Ah.16g101830-v1.1.a1
Gene Type Coding gene
Location AmaHy_arrow1_Scaffold_16 : 1539889-1550117 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000001
#Genes/#Species 35287/100
Phylogenetic origin

ID ORTHO05D001705
#Genes/#Species 367/90
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

tid Ah.16g101830-v1.1.a1

Descriptions

Short descriptions
Ortholog descriptions

Description Pentatricopeptide repeat-containing protein At2g25580

Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003677	IEA	InterPro	DNA binding
GO:0005515	IEA	InterPro	protein binding
GO:0008270	IEA	InterPro	zinc ion binding

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR032675	Leucine-rich repeat domain superfamily
IPR003656	Zinc finger, BED-type
IPR002885	Pentatricopeptide repeat
IPR036236	Zinc finger C2H2 superfamily
IPR036047	F-box-like domain superfamily
IPR032867	DYW domain
IPR011990	Tetratricopeptide-like helical domain superfamily

Mapman id	Description
16.11.3.3.4.6	RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (MEF8-group)