Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold257G45726 Striga asiatica HOM05D010565 ORTHO05D011213 1.6e-149 532.7 261 100.0
SGA_v2.0_scaffold191G40503 Striga asiatica HOM05D000003 ORTHO05D000004 5.9e-32 142.1 257 35.8
SGA_v2.0_scaffold14G07070 Striga asiatica HOM05D000003 ORTHO05D000004 9.5e-14 81.6 83 36.1
SGA_v2.0_scaffold71G23744 Striga asiatica HOM05D004014 ORTHO05D005890 1.6e-13 80.9 76 43.4
SGA_v2.0_scaffold380G50369 Striga asiatica HOM05D010565 ORTHO05D011213 4.7e-13 79.3 97 36.1
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 5.2e-12 75.9 101 36.6
SGA_v2.0_scaffold355G49769 Striga asiatica HOM05D000003 ORTHO05D011213 5.2e-12 75.9 210 29.5
SGA_v2.0_scaffold16G07708 Striga asiatica HOM05D004030 ORTHO05D004952 1.3e-10 71.2 84 32.1
SGA_v2.0_scaffold335G49110 Striga asiatica HOM05D001364 ORTHO05D001316 2.2e-10 70.5 117 27.4
SGA_v2.0_scaffold4G02180 Striga asiatica HOM05D000688 ORTHO05D004737 2.2e-10 70.5 75 33.3
SGA_v2.0_scaffold67G22785 Striga asiatica HOM05D010565 ORTHO05D011213 3.8e-10 69.7 95 31.6
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 1.4e-09 67.8 83 32.5
SGA_v2.0_scaffold1G00790 Striga asiatica HOM05D010565 ORTHO05D011213 1.4e-09 67.8 76 36.8
Cc04_g14660 Coffea canephora HOM05D000003 ORTHO05D000167 2.4e-09 67.0 74 39.2
SGA_v2.0_scaffold5G02882 Striga asiatica HOM05D001043 ORTHO05D001555 4.1e-09 66.2 83 33.7
SGA_v2.0_scaffold279G46783 Striga asiatica HOM05D005209 ORTHO05D006188 5.4e-09 65.9 111 29.7
Cc01_g07280 Coffea canephora HOM05D000003 ORTHO05D000004 2.1e-08 63.9 98 31.6
Cc11_g12030 Coffea canephora HOM05D000003 ORTHO05D000004 2.3e-07 60.5 89 29.2
SGA_v2.0_scaffold132G34546 Striga asiatica HOM05D010565 ORTHO05D011213 2.3e-07 60.5 78 30.8
SGA_v2.0_scaffold170G38754 Striga asiatica HOM05D010565 ORTHO05D011213 8.6e-07 58.5 134 27.6
SGA_v2.0_scaffold1G00691 Striga asiatica HOM05D010565 ORTHO05D011213 8.6e-07 58.5 134 27.6
BolC3t19864H Brassica oleracea HOM05D001239 ORTHO05D000925 1.5e-06 57.8 96 29.2
SGA_v2.0_scaffold19G08782 Striga asiatica HOM05D010565 ORTHO05D011213 1.5e-06 57.8 134 27.6
SGA_v2.0_scaffold202G41432 Striga asiatica HOM05D010565 ORTHO05D011213 5.6e-06 55.8 132 28.8
SGA_v2.0_scaffold23G10182 Striga asiatica HOM05D010565 ORTHO05D011213 5.6e-06 55.8 63 36.5
Atru.chr2.915 Acer truncatum HOM05D000003 ORTHO05D000004 9.6e-06 55.1 103 31.1
FvH4_7g06171 Fragaria vesca HOM05D000003 ORTHO05D000006 9.6e-06 55.1 114 27.2
SGA_v2.0_scaffold122G33296 Striga asiatica HOM05D000003 ORTHO05D000004 9.6e-06 55.1 83 28.9


User provided reference genes

Program Settings