Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold253G45198 Striga asiatica HOM05D005629 ORTHO05D008000 2.5e-209 731.9 373 100.0
Migut.F00066 Erythranthe guttata HOM05D005629 ORTHO05D008000 7.9e-155 550.8 338 82.8
SalBow4G2288 Salvia bowleyana HOM05D005629 ORTHO05D008000 9.7e-153 543.9 328 84.5
Nitab4.5_0005161g0130 Nicotiana tabacum HOM05D005629 ORTHO05D008000 1.0e-141 507.3 303 84.2
Nitab4.5_0000559g0400 Nicotiana tabacum HOM05D005629 ORTHO05D008000 4.7e-139 498.4 303 82.5
PGSC0003DMG400013378 Solanum tuberosum HOM05D005629 ORTHO05D008000 6.1e-139 498.0 303 82.8
CANSAT64G1539 Cannabis sativa HOM05D005629 ORTHO05D008000 8.0e-139 497.7 321 79.1
CiPaw.03G055300 Carya illinoinensis HOM05D005629 ORTHO05D008000 8.0e-139 497.7 337 76.9
GSVIVG01033097001 Vitis vinifera HOM05D005629 ORTHO05D008000 1.8e-138 496.5 344 76.7
Hma1.2p1_1278F.1_g272330 Hydrangea macrophylla HOM05D005629 ORTHO05D008000 8.8e-138 494.2 336 75.3
CAN.G1751.5 Capsicum annuum HOM05D005629 ORTHO05D008000 2.0e-137 493.0 292 83.6
QL02p071469 Quercus lobata HOM05D005629 ORTHO05D008000 3.3e-137 492.3 340 75.3
Solyc03g005000.4 Solanum lycopersicum HOM05D005629 ORTHO05D008000 9.7e-137 490.7 303 81.5
CSS0048682 Camellia sinensis var. sinensis HOM05D005629 ORTHO05D004503 1.3e-136 490.3 293 83.3
Ciclev10015840m.g Citrus clementina HOM05D005629 ORTHO05D008000 2.2e-136 489.6 304 79.6
Sopen03g001010 Solanum pennellii HOM05D005629 ORTHO05D008000 3.7e-136 488.8 296 82.4
Cfa007230 Carpinus fangiana HOM05D005629 ORTHO05D008000 4.8e-136 488.4 322 78.3
Gohir.D07G235300 Gossypium hirsutum HOM05D005629 ORTHO05D008000 4.8e-136 488.4 299 80.9
Peaxi162Scf00700g00023 Petunia axillaris HOM05D005629 ORTHO05D008000 4.8e-136 488.4 321 78.2
Eucgr.I01649 Eucalyptus grandis HOM05D005629 ORTHO05D008000 8.2e-136 487.6 296 82.8
Cc07_g00800 Coffea canephora HOM05D005629 ORTHO05D008000 1.1e-135 487.3 353 72.0
COL.COLO4_17207 Corchorus olitorius HOM05D005629 ORTHO05D008000 1.1e-135 487.3 305 79.3
Dinv33339 Davidia involucrata HOM05D005629 ORTHO05D008000 1.1e-135 487.3 331 76.4
unitig_52.g17654 Utricularia gibba HOM05D005629 ORTHO05D008000 1.1e-135 487.3 282 86.2
HanXRQChr17g0550111 Helianthus annuus HOM05D005629 ORTHO05D008000 1.4e-135 486.9 342 74.3
Oeu058781.1 Olea europaea HOM05D005629 ORTHO05D008000 1.4e-135 486.9 336 76.5
Prupe.3G305800 Prunus persica HOM05D005629 ORTHO05D008000 4.1e-135 485.3 328 76.5
Actinidia36200 Actinidia chinensis HOM05D005629 ORTHO05D008000 5.3e-135 485.0 300 81.7
arahy.Tifrunner.gnm1.ann1.26H0NE Arachis hypogaea HOM05D005629 ORTHO05D008000 9.1e-135 484.2 353 70.8
FAN09G2642 Fragaria x ananassa HOM05D005629 ORTHO05D008000 1.2e-134 483.8 290 82.1
Glyma.16G056900 Glycine max HOM05D005629 ORTHO05D008000 1.2e-134 483.8 315 77.1
Atru.chr6.2566 Acer truncatum HOM05D005629 ORTHO05D008000 1.6e-134 483.4 285 84.2
Gorai.001G271100 Gossypium raimondii HOM05D005629 ORTHO05D008000 1.6e-134 483.4 300 80.7
Thecc.04G035600 Theobroma cacao HOM05D005629 ORTHO05D008000 1.6e-134 483.4 347 72.3
Lj1g0025061 Lotus japonicus HOM05D005629 ORTHO05D008000 3.5e-134 482.3 324 75.3
FvH4_6g53470 Fragaria vesca HOM05D005629 ORTHO05D008000 4.5e-134 481.9 290 82.4
Sp2g16240 Schrenkiella parvula HOM05D005629 ORTHO05D008000 2.9e-133 479.2 337 70.9
Actinidia05920 Actinidia chinensis HOM05D005629 ORTHO05D008000 3.8e-133 478.8 303 80.5
Lalb_Chr14g0363391 Lupinus albus HOM05D005629 ORTHO05D008000 5.0e-133 478.4 308 78.6
Phvul.001G094100 Phaseolus vulgaris HOM05D005629 ORTHO05D008000 5.0e-133 478.4 341 71.8
PGR142G0641 Punica granatum HOM05D005629 ORTHO05D008000 5.0e-133 478.4 356 70.8
Haze_14872 Corylus avellana HOM05D005629 ORTHO05D008000 6.5e-133 478.0 283 84.5
Psat3g164800 Pisum sativum HOM05D005629 ORTHO05D008000 6.5e-133 478.0 312 76.3
RcHm_v2.0_Chr2g0175511 Rosa chinensis HOM05D005629 ORTHO05D008000 8.5e-133 477.6 290 81.4
Gohir.A07G228100 Gossypium hirsutum HOM05D005629 ORTHO05D008000 1.1e-132 477.2 300 80.0
BcaC06g31019 Brassica carinata HOM05D005629 ORTHO05D008000 1.5e-132 476.9 296 79.1
BcaC06g33857 Brassica carinata HOM05D005629 ORTHO05D008000 1.5e-132 476.9 296 79.1
Sc03g0006560 Simmondsia chinensis HOM05D005629 ORTHO05D008000 1.5e-132 476.9 292 79.8
THA.LOC104825621 Tarenaya hassleriana HOM05D005629 ORTHO05D008000 1.9e-132 476.5 300 77.3
VMungo1383G2395 Vigna mungo HOM05D005629 ORTHO05D008000 3.2e-132 475.7 298 79.5
AL5G16240 Arabidopsis lyrata HOM05D005629 ORTHO05D008000 4.2e-132 475.3 291 79.4
BcaC06g33860 Brassica carinata HOM05D005629 ORTHO05D008000 4.2e-132 475.3 291 78.7
ClCG05G013480 Citrullus lanatus HOM05D005629 ORTHO05D008000 4.2e-132 475.3 281 84.0
A06p41480 Brassica napus HOM05D005629 ORTHO05D008000 5.5e-132 474.9 291 78.7
BraA06t27073Z Brassica rapa HOM05D005629 ORTHO05D008000 5.5e-132 474.9 291 78.7
Sed0004120 Sechium edule HOM05D005629 ORTHO05D008000 5.5e-132 474.9 289 81.0
Carub.0005s0536 Capsella rubella HOM05D005629 ORTHO05D008000 7.2e-132 474.6 291 79.4
Thhalv10004520m.g Eutrema salsugineum HOM05D005629 ORTHO05D008000 9.4e-132 474.2 316 74.7
BolC7t44133H Brassica oleracea HOM05D005629 ORTHO05D008000 1.2e-131 473.8 291 78.4
Ca_26782_v3 Cicer arietinum L. HOM05D005629 ORTHO05D008000 1.2e-131 473.8 308 75.6
Gohir.A11G064500 Gossypium hirsutum HOM05D005629 ORTHO05D008000 2.1e-131 473.0 319 75.9
Aqoxy3G01541 Aquilegia oxysepala HOM05D005629 ORTHO05D008000 3.6e-131 472.2 314 75.5
Cpa.g.sc171.18 Carica papaya HOM05D005629 ORTHO05D008000 4.7e-131 471.9 295 78.3
CsaV3_3G027030 Cucumis sativus L. HOM05D005629 ORTHO05D008000 4.7e-131 471.9 288 80.9
Gohir.D11G068800 Gossypium hirsutum HOM05D005629 ORTHO05D008000 4.7e-131 471.9 319 75.5
C07p36170 Brassica napus HOM05D005629 ORTHO05D008000 6.1e-131 471.5 291 78.4
TWI56G1125 Tripterygium wilfordii HOM05D005629 ORTHO05D008000 8.0e-131 471.1 335 72.8
ECA246G2396 Erigeron canadensis HOM05D005629 ORTHO05D008000 1.0e-130 470.7 282 81.2
MD09G1011200 Malus domestica HOM05D005629 ORTHO05D008000 1.8e-130 469.9 333 73.0
AT3G27110 Arabidopsis thaliana HOM05D005629 ORTHO05D008000 2.3e-130 469.5 291 78.7
PSO017G3506 Papaver somniferum HOM05D005629 ORTHO05D008000 3.0e-130 469.2 319 74.0
DCAR_011309 Daucus carota HOM05D005629 ORTHO05D008000 5.2e-130 468.4 314 75.8
Lju41A52T99 Lonicera japonica HOM05D005629 ORTHO05D008000 5.2e-130 468.4 300 79.7
Gorai.007G073600 Gossypium raimondii HOM05D005629 ORTHO05D008000 1.5e-129 466.8 320 75.0
Aa31LG2G5490 Aethionema arabicum HOM05D005629 ORTHO05D008000 2.0e-129 466.5 294 77.6
EL10Ac6g15359 Beta vulgaris HOM05D005629 ORTHO05D008000 3.4e-129 465.7 319 73.7
Ah.02g120470 Amaranthus hybridus HOM05D005629 ORTHO05D008000 5.7e-129 464.9 298 76.5
Potri.001G330800 Populus trichocarpa HOM05D005629 ORTHO05D008000 5.7e-129 464.9 286 82.2
ATR0561G239 Amborella trichopoda HOM05D005629 ORTHO05D008000 1.7e-128 463.4 301 76.4
Migut.H00778 Erythranthe guttata HOM05D005629 ORTHO05D008000 1.7e-128 463.4 262 88.9
TPR.G38340 Trifolium pratense HOM05D005629 ORTHO05D008000 1.7e-128 463.4 286 81.1
Medtr7g033405 Medicago truncatula HOM05D005629 ORTHO05D008000 1.4e-127 460.3 333 70.0
Sabra16G0211800 Salix brachista HOM05D005629 ORTHO05D008000 1.8e-127 459.9 302 78.8
Os01g0970700 Oryza sativa ssp. japonica HOM05D005629 ORTHO05D008000 1.9e-124 449.9 284 76.4
vmacro05954 Vaccinium macrocarpon HOM05D005629 ORTHO05D008000 9.5e-124 447.6 335 68.7
Zm00001eb127160 Zea mays HOM05D005629 ORTHO05D008000 1.8e-122 443.4 271 77.5
HPP92_024293 Vanilla planifolia HOM05D005629 ORTHO05D008000 1.2e-121 440.7 328 69.8
HPP92_024304 Vanilla planifolia HOM05D005629 ORTHO05D008000 1.2e-121 440.7 328 69.8
Mapoly0033s0112 Marchantia polymorpha HOM05D005629 ORTHO05D008000 1.3e-120 437.2 298 70.5
Rhsim10G0006600 Rhododendron simsii HOM05D005629 ORTHO05D008000 3.7e-120 435.6 283 78.4
SEGI_10761 Sequoiadendron giganteum HOM05D005629 ORTHO05D008000 3.1e-119 432.6 285 73.7
Duzib264G0865 Durio zibethinus HOM05D005629 ORTHO05D008000 4.1e-119 432.2 317 72.2
Migut.K01513 Erythranthe guttata HOM05D005629 ORTHO05D008000 1.1e-116 424.1 273 81.3
Hund04337 Selenicereus undatus HOM05D005629 ORTHO05D008000 4.0e-114 415.6 364 61.0
Dinv25662 Davidia involucrata HOM05D005629 ORTHO05D000552 3.4e-105 386.0 216 88.4
Gorai.004G126700 Gossypium raimondii HOM05D005629 ORTHO05D008000 3.7e-104 382.5 237 79.7
AUR62003511 Chenopodium quinoa HOM05D005629 ORTHO05D008000 1.9e-103 380.2 247 74.1
Nn4g22342 Nelumbo nucifera HOM05D005629 ORTHO05D008000 2.4e-103 379.8 316 65.2
Migut.G01029 Erythranthe guttata HOM05D005629 ORTHO05D008000 5.4e-103 378.6 305 69.5
Gohir.D08G117950 Gossypium hirsutum HOM05D005629 ORTHO05D008000 2.0e-102 376.7 235 79.1
AUR62017822 Chenopodium quinoa HOM05D005629 ORTHO05D008000 1.6e-99 367.1 232 76.3
Cre14.g620150 Chlamydomonas reinhardtii HOM05D005629 ORTHO05D008000 1.2e-94 350.9 263 64.3
MCO03G471 Micromonas commoda HOM05D005629 ORTHO05D008000 1.6e-94 350.5 262 62.6
FAN05G5024 Fragaria x ananassa HOM05D005629 ORTHO05D008000 6.2e-91 338.6 206 81.6
Manes.15G160600 Manihot esculenta HOM05D005629 ORTHO05D008000 8.1e-91 338.2 204 83.3
AagrBONN_evm.TU.Sc2ySwM_117.2248 Anthoceros agrestis HOM05D005629 ORTHO05D008000 2.0e-89 333.6 201 76.6
FAN02G3075 Fragaria x ananassa HOM05D005629 ORTHO05D008000 1.7e-88 330.5 214 78.5
MELO3C014882.2 Cucumis melo HOM05D005629 ORTHO05D008000 8.4e-88 328.2 203 79.8
CARHR148330 Cardamine hirsuta HOM05D005629 ORTHO05D008000 1.1e-87 327.8 219 73.5
PRCOL_00001739 Prasinoderma coloniale HOM05D005629 ORTHO05D008000 1.7e-80 303.9 264 54.2
FAN14G4117 Fragaria x ananassa HOM05D005629 ORTHO05D008000 2.2e-80 303.5 270 62.2
Lsat_1_v5_gn_9_1240 Lactuca sativa HOM05D005629 ORTHO05D008000 1.4e-71 274.2 159 81.8
CDE05G1086 Ceratophyllum demersum HOM05D001132 ORTHO05D002510 8.7e-69 265.0 212 65.1
Migut.K01251 Erythranthe guttata HOM05D005629 ORTHO05D008000 1.1e-60 238.0 159 78.6
Zm00001eb202540 Zea mays HOM05D002249 ORTHO05D002443 9.6e-60 235.0 207 58.9
Zm00001eb174780 Zea mays HOM05D005629 ORTHO05D008000 3.4e-49 199.9 175 61.1
FvH4_6g53350 Fragaria vesca HOM05D005629 ORTHO05D022663 7.7e-49 198.7 317 39.4
Zm00001eb427710 Zea mays HOM05D005629 ORTHO05D003422 2.2e-48 197.2 116 80.2
FvH4_6g53390 Fragaria vesca HOM05D005629 ORTHO05D022663 3.8e-48 196.4 315 40.3
Zm00001eb146790 Zea mays HOM05D005629 ORTHO05D003607 9.4e-47 191.8 116 80.2
TAR622G1261 Trochodendron aralioides HOM05D005629 ORTHO05D008000 1.2e-46 191.4 118 78.8
Zm00001eb332250 Zea mays HOM05D002343 ORTHO05D002443 4.3e-44 183.0 127 70.9
FvH4_6g53420 Fragaria vesca HOM05D005629 ORTHO05D022663 4.8e-43 179.5 220 47.3
CDE02G4678 Ceratophyllum demersum HOM05D000139 ORTHO05D000103 1.0e-32 145.2 234 40.6
FAN14G1519 Fragaria x ananassa HOM05D005629 ORTHO05D022663 1.3e-32 144.8 313 34.5
FAN02G3684 Fragaria x ananassa HOM05D005629 ORTHO05D008000 5.0e-32 142.9 79 84.8
PRCOL_00005410 Prasinoderma coloniale HOM05D005629 ORTHO05D333266 9.7e-28 128.6 291 32.6
arahy.Tifrunner.gnm1.ann1.0H9GWB Arachis hypogaea HOM05D005629 ORTHO05D008000 1.3e-27 128.3 76 80.3
MELO3C032122.2 Cucumis melo HOM05D005629 ORTHO05D008000 1.8e-26 124.4 63 90.5
Lsat_1_v5_gn_0_46360 Lactuca sativa HOM05D005629 ORTHO05D008000 2.4e-26 124.0 125 57.6
Zm00001eb048250 Zea mays HOM05D005629 ORTHO05D008000 5.0e-24 116.3 74 70.3
AagrBONN_evm.TU.Sc2ySwM_228.873 Anthoceros agrestis HOM05D005629 ORTHO05D008000 3.6e-22 110.2 302 28.1
FAN02G2357 Fragaria x ananassa HOM05D005629 ORTHO05D008000 6.3e-19 99.4 110 48.2
A02p35090 Brassica napus HOM05D005629 ORTHO05D008000 2.0e-17 94.4 81 61.7
BraA02t08515Z Brassica rapa HOM05D005629 ORTHO05D008000 1.0e-16 92.0 77 62.3
FvH4_6g53460 Fragaria vesca HOM05D005629 ORTHO05D022663 4.1e-10 70.1 182 32.4
CAN.G792.7 Capsicum annuum HOM05D002518 ORTHO05D002630 2.0e-09 67.8 45 71.1
BolC2t11443H Brassica oleracea HOM05D005629 ORTHO05D008000 2.9e-08 63.9 53 64.2
Zm00001eb059400 Zea mays HOM05D003056 ORTHO05D003422 1.6e-06 58.2 59 52.5
FvH4_6g53451 Fragaria vesca HOM05D005629 ORTHO05D196308 2.1e-06 57.8 71 46.5


User provided reference genes

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