Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold253G45138 Striga asiatica HOM05D004737 ORTHO05D005623 2.1e-103 379.0 192 100.0
SalBow5G1266 Salvia bowleyana HOM05D004737 ORTHO05D005623 9.6e-72 273.9 185 73.5
MSTRG.25602 Avicennia marina HOM05D004737 ORTHO05D005623 2.1e-71 272.7 178 78.1
SGA_v2.0_scaffold96G28950 Striga asiatica HOM05D004737 ORTHO05D005623 1.4e-70 270.0 190 74.2
Dinv38949 Davidia involucrata HOM05D004737 ORTHO05D005623 1.4e-67 260.0 165 77.0
Hma1.2p1_0896F.1_g233940 Hydrangea macrophylla HOM05D004737 ORTHO05D005623 3.2e-67 258.8 168 73.8
Cc08_g14650 Coffea canephora HOM05D004737 ORTHO05D005623 1.6e-66 256.5 169 75.7
QL12p034148 Quercus lobata HOM05D004737 ORTHO05D005623 3.3e-64 248.8 168 73.2
GSVIVG01019762001 Vitis vinifera HOM05D004737 ORTHO05D005623 4.3e-64 248.4 164 74.4
TAR625G0056 Trochodendron aralioides HOM05D004737 ORTHO05D005623 5.7e-64 248.1 164 72.0
Rhsim02G0228600 Rhododendron simsii HOM05D004737 ORTHO05D005623 9.7e-64 247.3 164 71.3
Lj8A232T63 Lonicera japonica HOM05D004737 ORTHO05D005623 4.8e-63 245.0 168 70.2
QL12p034121 Quercus lobata HOM05D000005 ORTHO05D000833 4.8e-63 245.0 189 66.1
QL12p033263 Quercus lobata HOM05D004737 ORTHO05D005623 6.3e-63 244.6 168 72.6
QL12p034065 Quercus lobata HOM05D004737 ORTHO05D005623 6.3e-63 244.6 168 72.6
vmacro11322 Vaccinium macrocarpon HOM05D004737 ORTHO05D005623 1.4e-62 243.4 164 71.3
Manes.02G022400 Manihot esculenta HOM05D004737 ORTHO05D005623 3.1e-62 242.3 165 70.3
Potri.001G104800 Populus trichocarpa HOM05D004737 ORTHO05D005623 5.3e-62 241.5 168 67.3
CSS0013453 Camellia sinensis var. sinensis HOM05D004737 ORTHO05D005623 6.9e-62 241.1 164 72.6
MD14G1103600 Malus domestica HOM05D004737 ORTHO05D005623 9.0e-62 240.7 167 70.7
Nitab4.5_0010794g0020 Nicotiana tabacum HOM05D004737 ORTHO05D005623 9.0e-62 240.7 163 73.0
Nitab4.5_0001215g0220 Nicotiana tabacum HOM05D004737 ORTHO05D005623 1.5e-61 240.0 163 72.4
EL10Ac6g13984 Beta vulgaris HOM05D004737 ORTHO05D005623 4.5e-61 238.4 165 69.1
TWI38G1747 Tripterygium wilfordii HOM05D004737 ORTHO05D005623 7.6e-61 237.7 168 69.6
Nn5g30495 Nelumbo nucifera HOM05D004737 ORTHO05D005623 1.7e-60 236.5 172 69.8
Prupe.5G098900 Prunus persica HOM05D004737 ORTHO05D005623 3.8e-60 235.3 162 69.8
RcHm_v2.0_Chr7g0197851 Rosa chinensis HOM05D004737 ORTHO05D005623 6.5e-60 234.6 178 66.9
Lsat_1_v5_gn_3_7380 Lactuca sativa HOM05D004737 ORTHO05D005623 8.5e-60 234.2 167 68.9
Gorai.004G211600 Gossypium raimondii HOM05D004737 ORTHO05D005623 1.1e-59 233.8 163 71.2
Duzib084G0936 Durio zibethinus HOM05D004737 ORTHO05D005623 1.4e-59 233.4 162 70.4
Gohir.D08G200800 Gossypium hirsutum HOM05D004737 ORTHO05D005623 4.2e-59 231.9 162 71.0
AUR62010668 Chenopodium quinoa HOM05D004737 ORTHO05D005623 2.7e-58 229.2 163 69.3
Gohir.A08G182200 Gossypium hirsutum HOM05D004737 ORTHO05D005623 2.7e-58 229.2 172 66.3
Sed0019193 Sechium edule HOM05D004737 ORTHO05D005623 1.4e-57 226.9 169 66.9
AUR62017215 Chenopodium quinoa HOM05D004737 ORTHO05D005623 3.9e-57 225.3 163 67.5
Haze_08850 Corylus avellana HOM05D004737 ORTHO05D005623 3.9e-57 225.3 155 72.9
MELO3C005669.2 Cucumis melo HOM05D004737 ORTHO05D005623 3.9e-57 225.3 162 69.1
PGSC0003DMG400031232 Solanum tuberosum HOM05D004737 ORTHO05D005623 3.9e-57 225.3 162 67.9
CsaV3_5G002870 Cucumis sativus L. HOM05D004737 ORTHO05D005623 5.1e-57 224.9 162 66.7
Solyc10g074990.2 Solanum lycopersicum HOM05D004737 ORTHO05D005623 1.1e-56 223.8 162 67.3
Haze_08864 Corylus avellana HOM05D004737 ORTHO05D005623 1.5e-56 223.4 154 72.7
Sabra01G0079500 Salix brachista HOM05D004737 ORTHO05D005623 1.5e-56 223.4 203 55.7
Ah.02g116610 Amaranthus hybridus HOM05D000756 ORTHO05D000604 2.5e-56 222.6 151 71.5
PGR042G1084 Punica granatum HOM05D004737 ORTHO05D005623 3.3e-56 222.2 169 65.7
Sopen10g027480 Solanum pennellii HOM05D004737 ORTHO05D005623 3.3e-56 222.2 162 66.7
Lj2g0011086 Lotus japonicus HOM05D004737 ORTHO05D005623 1.7e-55 219.9 170 62.9
Thecc.03G277700 Theobroma cacao HOM05D004737 ORTHO05D005623 6.3e-55 218.0 183 60.7
ECA246G0717 Erigeron canadensis HOM05D004737 ORTHO05D005623 3.1e-54 215.7 168 62.5
COL.COLO4_34453 Corchorus olitorius HOM05D004737 ORTHO05D005623 6.9e-54 214.5 162 63.6
Peaxi162Scf00198g00034 Petunia axillaris HOM05D004737 ORTHO05D005623 1.5e-53 213.4 174 62.6
VMungo1215G1017 Vigna mungo HOM05D004737 ORTHO05D005623 2.0e-53 213.0 169 65.1
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 3.4e-53 212.2 165 63.0
Ciclev10006013m.g Citrus clementina HOM05D004737 ORTHO05D005623 7.7e-53 211.1 175 60.6
DCAR_008401 Daucus carota HOM05D004737 ORTHO05D005623 1.0e-52 210.7 154 65.6
HanXRQChr06g0165541 Helianthus annuus HOM05D004737 ORTHO05D005623 1.0e-52 210.7 163 63.8
Aqoxy6G02772 Aquilegia oxysepala HOM05D004737 ORTHO05D005623 1.3e-52 210.3 171 63.7
CAN.G1149.8 Capsicum annuum HOM05D004737 ORTHO05D005623 6.5e-52 208.0 170 61.8
Eucgr.E00582 Eucalyptus grandis HOM05D004737 ORTHO05D005623 6.5e-52 208.0 169 60.9
Phvul.002G157400 Phaseolus vulgaris HOM05D004737 ORTHO05D005623 8.5e-52 207.6 165 63.6
Migut.A00772 Erythranthe guttata HOM05D004737 ORTHO05D005623 1.9e-51 206.5 132 78.8
ClCG01G002790 Citrullus lanatus HOM05D004737 ORTHO05D005623 2.5e-51 206.1 154 66.9
Hma1.2p1_0896F.1_g233950 Hydrangea macrophylla HOM05D004737 ORTHO05D005623 3.2e-51 205.7 168 62.5
CiPaw.11G135900 Carya illinoinensis HOM05D004737 ORTHO05D005623 5.5e-51 204.9 168 61.9
ATR0782G239 Amborella trichopoda HOM05D004737 ORTHO05D005623 2.1e-50 203.0 165 60.6
CANSAT21G0205 Cannabis sativa HOM05D004737 ORTHO05D005623 2.7e-50 202.6 168 60.7
HPP92_015901 Vanilla planifolia HOM05D004737 ORTHO05D005623 2.7e-50 202.6 172 58.1
arahy.Tifrunner.gnm1.ann1.1HA888 Arachis hypogaea HOM05D004737 ORTHO05D005623 1.4e-49 200.3 166 63.3
Glyma.01G219700 Glycine max HOM05D004737 ORTHO05D005623 1.1e-48 197.2 169 60.9
TPR.G6698 Trifolium pratense HOM05D004737 ORTHO05D005623 1.5e-48 196.8 163 57.7
BcaC02g09203 Brassica carinata HOM05D004737 ORTHO05D005623 2.6e-48 196.1 170 58.2
C04p40020 Brassica napus HOM05D004737 ORTHO05D005623 2.6e-48 196.1 170 58.2
BolC4t25575H Brassica oleracea HOM05D004737 ORTHO05D005623 2.6e-48 196.1 170 58.2
A04p06580 Brassica napus HOM05D004737 ORTHO05D005623 7.4e-48 194.5 170 58.2
BraA04t16363Z Brassica rapa HOM05D004737 ORTHO05D005623 9.7e-48 194.1 169 58.6
unitig_88.g27612 Utricularia gibba HOM05D004737 ORTHO05D005623 9.7e-48 194.1 171 58.5
Lalb_Chr09g0321031 Lupinus albus HOM05D004737 ORTHO05D005623 1.3e-47 193.7 163 61.3
A07p21280 Brassica napus HOM05D004737 ORTHO05D005623 1.7e-47 193.4 168 58.3
BraA07t29816Z Brassica rapa HOM05D004737 ORTHO05D005623 1.7e-47 193.4 168 58.3
Atru.chr2.2103 Acer truncatum HOM05D004737 ORTHO05D005623 2.8e-47 192.6 167 59.3
SHI07123 Sapria himalayana HOM05D004737 ORTHO05D005623 2.8e-47 192.6 179 55.3
BcaB02g08548 Brassica carinata HOM05D004737 ORTHO05D005623 3.7e-47 192.2 170 58.2
AL5G33690 Arabidopsis lyrata HOM05D004737 ORTHO05D005623 1.1e-46 190.7 167 57.5
Actinidia14554 Actinidia chinensis HOM05D004737 ORTHO05D005623 1.4e-46 190.3 124 74.2
Sp5g09430 Schrenkiella parvula HOM05D004737 ORTHO05D005623 1.4e-46 190.3 167 58.1
AT3G52905 Arabidopsis thaliana HOM05D004737 ORTHO05D005623 1.8e-46 189.9 167 56.9
Thhalv10010768m.g Eutrema salsugineum HOM05D004737 ORTHO05D005623 1.8e-46 189.9 167 56.9
FvH4_5g02300 Fragaria vesca HOM05D004737 ORTHO05D005623 4.1e-46 188.7 168 56.5
BcaC08g44605 Brassica carinata HOM05D004737 ORTHO05D005623 7.0e-46 188.0 173 57.8
C06p20780 Brassica napus HOM05D004737 ORTHO05D005623 9.1e-46 187.6 173 57.8
BolC6t37261H Brassica oleracea HOM05D004737 ORTHO05D005623 9.1e-46 187.6 173 57.8
Carub.0005s1938 Capsella rubella HOM05D004737 ORTHO05D005623 9.1e-46 187.6 167 57.5
CARHR162770 Cardamine hirsuta HOM05D004737 ORTHO05D005623 9.1e-46 187.6 167 57.5
THA.LOC104805035 Tarenaya hassleriana HOM05D004737 ORTHO05D005623 2.0e-45 186.4 170 57.6
arahy.Tifrunner.gnm1.ann1.4Y2W44 Arachis hypogaea HOM05D004737 ORTHO05D005623 5.9e-45 184.9 156 63.5
Aa31LG10G7820 Aethionema arabicum HOM05D004737 ORTHO05D005623 2.5e-43 179.5 167 55.1
Sc07g0009740 Simmondsia chinensis HOM05D004737 ORTHO05D005623 3.2e-43 179.1 124 71.8
Os01g0764700 Oryza sativa ssp. japonica HOM05D004737 ORTHO05D005623 5.5e-43 178.3 166 57.8
Psat0s3411g0080 Pisum sativum HOM05D004737 ORTHO05D005623 2.2e-39 166.4 163 54.6
PSO675G2933 Papaver somniferum HOM05D004737 ORTHO05D005623 1.9e-35 153.3 180 48.3
PSO541G1514 Papaver somniferum HOM05D004737 ORTHO05D005623 2.7e-34 149.4 180 47.8
ECA246G4230 Erigeron canadensis HOM05D004737 ORTHO05D005623 5.2e-33 145.2 171 42.1
Atru.chr11.10 Acer truncatum HOM05D004737 ORTHO05D005623 7.5e-32 141.4 166 48.2
Atru.chr2.774 Acer truncatum HOM05D004737 ORTHO05D005623 9.1e-30 134.4 183 41.0
Atru.chr6.144 Acer truncatum HOM05D004737 ORTHO05D005623 1.1e-27 127.5 182 43.4
BcaB02g07803 Brassica carinata HOM05D004737 ORTHO05D005623 4.2e-27 125.6 106 56.6
Atru.chr6.77 Acer truncatum HOM05D004737 ORTHO05D005623 5.5e-27 125.2 184 42.9
SEGI_05186 Sequoiadendron giganteum HOM05D004737 ORTHO05D005623 8.0e-26 121.3 115 54.8
Atru.chr1.3075 Acer truncatum HOM05D004737 ORTHO05D005623 3.4e-24 115.9 187 39.6
Atru.chr6.169 Acer truncatum HOM05D004737 ORTHO05D005623 5.7e-24 115.2 165 45.5
Atru.chr1.4031 Acer truncatum HOM05D004737 ORTHO05D005623 7.5e-24 114.8 202 35.1
Atru.chr5.3476 Acer truncatum HOM05D004737 ORTHO05D005623 1.3e-23 114.0 176 44.9
Glyma.11G023800 Glycine max HOM05D004737 ORTHO05D005623 1.3e-23 114.0 108 58.3
Atru.chr13.1180 Acer truncatum HOM05D004737 ORTHO05D005623 8.3e-23 111.3 170 42.9
AagrBONN_evm.TU.Sc2ySwM_362.2040 Anthoceros agrestis HOM05D004737 ORTHO05D005623 2.0e-21 106.7 148 39.2
Atru.chr1.3074 Acer truncatum HOM05D004737 ORTHO05D005623 3.5e-21 105.9 179 36.9
Atru.chr13.1520 Acer truncatum HOM05D004737 ORTHO05D005623 4.5e-21 105.5 196 35.2
CBR_g78868 Chara braunii HOM05D000019 ORTHO05D000048 3.8e-20 102.4 136 41.2
Atru.chr4.898 Acer truncatum HOM05D004737 ORTHO05D005623 6.6e-20 101.7 174 39.1
Eucgr.E00580 Eucalyptus grandis HOM05D004737 ORTHO05D005623 6.6e-20 101.7 73 63.0
Pp3c24_17350 Physcomitrium patens HOM05D004737 ORTHO05D005623 8.6e-20 101.3 140 40.0
Zm00001eb152210 Zea mays HOM05D004737 ORTHO05D005623 1.1e-19 100.9 108 53.7
Atru.chr2.781 Acer truncatum HOM05D004737 ORTHO05D005623 1.2e-18 97.4 164 35.4
ECA240G3910 Erigeron canadensis HOM05D004737 ORTHO05D005623 2.1e-18 96.7 164 32.9
Atru.chr11.9 Acer truncatum HOM05D004737 ORTHO05D005623 4.7e-18 95.5 169 40.8
Psat2g182280 Pisum sativum HOM05D004737 ORTHO05D005623 4.7e-18 95.5 75 62.7
ECA240G0629 Erigeron canadensis HOM05D004737 ORTHO05D005623 6.1e-18 95.1 109 47.7
Mapoly0022s0110 Marchantia polymorpha HOM05D004737 ORTHO05D005623 6.1e-18 95.1 168 39.9
ECA248G3864 Erigeron canadensis HOM05D004737 ORTHO05D005623 1.4e-17 94.0 153 35.9
Cpa.g.sc128.49 Carica papaya HOM05D004737 ORTHO05D005623 1.8e-17 93.6 72 63.9
Atru.chr1.4028 Acer truncatum HOM05D004737 ORTHO05D005623 8.9e-17 91.3 165 34.5
Atru.chr8.895 Acer truncatum HOM05D004737 ORTHO05D005623 4.4e-16 89.0 183 32.8
Atru.chr1.3076 Acer truncatum HOM05D005378 ORTHO05D006986 5.7e-16 88.6 133 39.8
Atru.chr2.779 Acer truncatum HOM05D004737 ORTHO05D005623 7.5e-16 88.2 179 35.2
Atru.chr4.1971 Acer truncatum HOM05D004737 ORTHO05D005623 3.7e-15 85.9 166 33.7
Atru.chr4.1970 Acer truncatum HOM05D004737 ORTHO05D005623 1.4e-14 84.0 167 33.5
Atru.chr6.95 Acer truncatum HOM05D004737 ORTHO05D005623 1.3e-12 77.4 118 39.8
FAN04G3051 Fragaria x ananassa HOM05D004737 ORTHO05D005623 3.3e-11 72.8 71 54.9
Atru.chr1.4012 Acer truncatum HOM05D004737 ORTHO05D005623 5.6e-11 72.0 184 29.3
QL12p033469 Quercus lobata HOM05D004737 ORTHO05D005623 5.6e-11 72.0 44 77.3
Atru.chr12.1177 Acer truncatum HOM05D004737 ORTHO05D005623 7.3e-11 71.6 166 29.5
Atru.chr12.1179 Acer truncatum HOM05D004737 ORTHO05D005623 7.3e-11 71.6 172 33.1
Atru.chr3.997 Acer truncatum HOM05D004737 ORTHO05D005623 3.1e-09 66.2 188 28.2
Atru.chr12.1688 Acer truncatum HOM05D004737 ORTHO05D005623 6.8e-09 65.1 131 29.8
Atru.chr5.3478 Acer truncatum HOM05D004737 ORTHO05D005623 1.2e-08 64.3 126 33.3
Atru.chr7.1970 Acer truncatum HOM05D004737 ORTHO05D005623 4.4e-08 62.4 146 29.5
Atru.chr12.1697 Acer truncatum HOM05D004737 ORTHO05D005623 1.7e-07 60.5 158 25.9
Atru.chr8.1290 Acer truncatum HOM05D004737 ORTHO05D005623 2.9e-07 59.7 179 27.4
Atru.chr7.1971 Acer truncatum HOM05D004737 ORTHO05D005623 3.7e-07 59.3 132 31.8
Atru.chr5.2738 Acer truncatum HOM05D004737 ORTHO05D005623 1.4e-06 57.4 129 29.5


User provided reference genes

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