Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold24G10361 Striga asiatica HOM05D002009 ORTHO05D006831 4.5e-74 281.2 143 100.0
SGA_v2.0_scaffold80G25788 Striga asiatica HOM05D002009 ORTHO05D006831 3.9e-25 118.6 71 83.1
MSTRG.27991 Avicennia marina HOM05D002009 ORTHO05D006831 2.1e-23 112.8 71 77.5
Migut.N02062 Erythranthe guttata HOM05D002009 ORTHO05D006831 6.2e-23 111.3 71 77.5
Migut.N02070 Erythranthe guttata HOM05D002009 ORTHO05D006831 6.2e-23 111.3 71 77.5
Aa31LG2G11690 Aethionema arabicum HOM05D000208 ORTHO05D006831 3.4e-21 105.5 71 70.4
Oeu002661.1 Olea europaea HOM05D002009 ORTHO05D006831 4.4e-21 105.1 67 74.6
Nn3g21358 Nelumbo nucifera HOM05D002009 ORTHO05D006831 9.8e-21 104.0 71 71.8
A07p32520 Brassica napus HOM05D002009 ORTHO05D006831 2.2e-20 102.8 71 73.2
AL2G26100 Arabidopsis lyrata HOM05D002009 ORTHO05D006831 2.9e-20 102.4 71 69.0
AT1G67500 Arabidopsis thaliana HOM05D002009 ORTHO05D006831 2.9e-20 102.4 71 69.0
CARHR060080 Cardamine hirsuta HOM05D002009 ORTHO05D006831 2.9e-20 102.4 71 69.0
Rhsim06G0107400 Rhododendron simsii HOM05D002009 ORTHO05D006831 2.9e-20 102.4 120 50.8
Carub.0002s1383 Capsella rubella HOM05D002009 ORTHO05D006831 3.7e-20 102.1 71 69.0
Hma1.2p1_1077F.1_g254700 Hydrangea macrophylla HOM05D002009 ORTHO05D006831 3.7e-20 102.1 70 74.3
Sp5g22500 Schrenkiella parvula HOM05D002009 ORTHO05D006831 3.7e-20 102.1 71 69.0
vmacro04830 Vaccinium macrocarpon HOM05D002009 ORTHO05D006831 3.7e-20 102.1 71 70.4
vmacro04986 Vaccinium macrocarpon HOM05D002009 ORTHO05D006831 3.7e-20 102.1 71 70.4
BcaB03g15362 Brassica carinata HOM05D002009 ORTHO05D006831 4.9e-20 101.7 71 70.4
Dinv40301 Davidia involucrata HOM05D002009 ORTHO05D006831 4.9e-20 101.7 71 70.4
C06p38660 Brassica napus HOM05D002009 ORTHO05D006831 6.4e-20 101.3 71 70.4
BolC6t38955H Brassica oleracea HOM05D002009 ORTHO05D006831 6.4e-20 101.3 71 70.4
Thhalv10017996m.g Eutrema salsugineum HOM05D002009 ORTHO05D006831 6.4e-20 101.3 71 67.6
Thecc.05G301300 Theobroma cacao HOM05D002009 ORTHO05D006831 6.4e-20 101.3 71 70.4
GSVIVG01000087001 Vitis vinifera HOM05D002009 ORTHO05D006831 6.4e-20 101.3 71 69.0
Lalb_Chr18g0045671 Lupinus albus HOM05D002009 ORTHO05D006831 8.3e-20 100.9 71 69.0
unitig_0.g2311 Utricularia gibba HOM05D002009 ORTHO05D006831 1.1e-19 100.5 71 69.0
BraA07t30876Z Brassica rapa HOM05D002009 ORTHO05D006831 1.4e-19 100.1 71 70.4
ECA236G3568 Erigeron canadensis HOM05D002009 ORTHO05D006831 2.4e-19 99.4 94 57.4
Lj9C89G5 Lonicera japonica HOM05D002009 ORTHO05D006831 2.4e-19 99.4 71 69.0
CiPaw.07G018700 Carya illinoinensis HOM05D002009 ORTHO05D006831 3.2e-19 99.0 67 71.6
TWI36G1702 Tripterygium wilfordii HOM05D002009 ORTHO05D006831 3.2e-19 99.0 71 69.0
CSS0006817 Camellia sinensis var. sinensis HOM05D002009 ORTHO05D006831 4.1e-19 98.6 71 69.0
CSS0012384 Camellia sinensis var. sinensis HOM05D002009 ORTHO05D006831 4.1e-19 98.6 71 69.0
Rhsim12G0060600 Rhododendron simsii HOM05D002009 ORTHO05D006831 4.1e-19 98.6 71 69.0
Lsat_1_v5_gn_9_86800 Lactuca sativa HOM05D002009 ORTHO05D006831 5.4e-19 98.2 71 67.6
Lju1040C0G1 Lonicera japonica HOM05D002009 ORTHO05D006831 5.4e-19 98.2 67 71.6
Hund07076 Selenicereus undatus HOM05D002009 ORTHO05D006831 5.4e-19 98.2 71 71.8
Aqoxy2G03070 Aquilegia oxysepala HOM05D002009 ORTHO05D006831 7.0e-19 97.8 71 69.0
Cc02_g33310 Coffea canephora HOM05D002009 ORTHO05D006831 7.0e-19 97.8 71 70.4
QL03p054396 Quercus lobata HOM05D002009 ORTHO05D006831 7.0e-19 97.8 67 70.1
ClCG02G015610 Citrullus lanatus HOM05D002009 ORTHO05D006831 9.2e-19 97.4 71 67.6
Sed0001711 Sechium edule HOM05D002009 ORTHO05D006831 9.2e-19 97.4 67 70.1
DCAR_001814 Daucus carota HOM05D002009 ORTHO05D006831 1.2e-18 97.1 71 67.6
Potri.013G022200 Populus trichocarpa HOM05D002009 ORTHO05D006831 1.2e-18 97.1 71 67.6
QL03p007751 Quercus lobata HOM05D002009 ORTHO05D006831 1.2e-18 97.1 67 70.1
CsaV3_2G006490 Cucumis sativus L. HOM05D002009 ORTHO05D006831 1.6e-18 96.7 71 66.2
Sc09g0003130 Simmondsia chinensis HOM05D002009 ORTHO05D006831 1.6e-18 96.7 71 71.8
THA.LOC104823729 Tarenaya hassleriana HOM05D002009 ORTHO05D006831 1.6e-18 96.7 71 66.2
Haze_04184 Corylus avellana HOM05D002009 ORTHO05D006831 2.1e-18 96.3 67 70.1
Eucgr.B01945 Eucalyptus grandis HOM05D002009 ORTHO05D006831 2.1e-18 96.3 71 64.8
Lj1g0026508 Lotus japonicus HOM05D002009 ORTHO05D006831 2.1e-18 96.3 71 67.6
QL03p007353 Quercus lobata HOM05D002009 ORTHO05D006831 2.1e-18 96.3 67 70.1
Zm00001eb330170 Zea mays HOM05D002009 ORTHO05D006831 2.1e-18 96.3 71 67.6
Sabra13G0024400 Salix brachista HOM05D002009 ORTHO05D006831 2.7e-18 95.9 67 70.1
arahy.Tifrunner.gnm1.ann1.UY60S3 Arachis hypogaea HOM05D002009 ORTHO05D006831 3.5e-18 95.5 71 66.2
arahy.Tifrunner.gnm1.ann1.V7WSHY Arachis hypogaea HOM05D002009 ORTHO05D006831 3.5e-18 95.5 71 66.2
Cpa.g.sc48.68 Carica papaya HOM05D002009 ORTHO05D006831 3.5e-18 95.5 71 64.8
Ca_05812_v3 Cicer arietinum L. HOM05D002009 ORTHO05D006831 3.5e-18 95.5 71 66.2
HanXRQChr15g0469941 Helianthus annuus HOM05D002009 ORTHO05D006831 3.5e-18 95.5 71 66.2
VMungo0540G0763 Vigna mungo HOM05D002009 ORTHO05D006831 3.5e-18 95.5 71 66.2
Ciclev10003639m.g Citrus clementina HOM05D002009 ORTHO05D006831 4.6e-18 95.1 71 66.2
Gohir.D08G227001 Gossypium hirsutum HOM05D002009 ORTHO05D006831 4.6e-18 95.1 71 67.6
Medtr7g113380 Medicago truncatula HOM05D002009 ORTHO05D006831 4.6e-18 95.1 71 67.6
Atru.chr2.372 Acer truncatum HOM05D002009 ORTHO05D006831 6.0e-18 94.7 71 66.2
Phvul.006G091300 Phaseolus vulgaris HOM05D002009 ORTHO05D006831 6.0e-18 94.7 71 64.8
Psat0s2197g0160 Pisum sativum HOM05D002009 ORTHO05D006831 6.0e-18 94.7 71 67.6
TPR.G33207 Trifolium pratense HOM05D002009 ORTHO05D006831 6.0e-18 94.7 71 64.8
HPP92_001324 Vanilla planifolia HOM05D002009 ORTHO05D006831 6.0e-18 94.7 71 67.6
EL10Ac4g09369 Beta vulgaris HOM05D002009 ORTHO05D006831 7.8e-18 94.4 80 62.5
Glyma.03G237200 Glycine max HOM05D002009 ORTHO05D006831 7.8e-18 94.4 71 66.2
MD12G1217900 Malus domestica HOM05D002009 ORTHO05D006831 7.8e-18 94.4 71 66.2
Rhsim06G0107300 Rhododendron simsii HOM05D002009 ORTHO05D006831 1.0e-17 94.0 75 62.7
MELO3C004237.2 Cucumis melo HOM05D002009 ORTHO05D006831 1.3e-17 93.6 71 64.8
Gorai.004G241000 Gossypium raimondii HOM05D002009 ORTHO05D006831 1.7e-17 93.2 71 66.2
Solyc01g099220.3 Solanum lycopersicum HOM05D002009 ORTHO05D006831 1.7e-17 93.2 71 67.6
Sopen01g042770 Solanum pennellii HOM05D002009 ORTHO05D006831 1.7e-17 93.2 71 67.6
Actinidia23644 Actinidia chinensis HOM05D002009 ORTHO05D006831 2.3e-17 92.8 71 63.4
Peaxi162Scf00037g00637 Petunia axillaris HOM05D002009 ORTHO05D006831 2.3e-17 92.8 71 66.2
Nitab4.5_0000137g0070 Nicotiana tabacum HOM05D002009 ORTHO05D006831 3.0e-17 92.4 71 67.6
Nitab4.5_0003156g0080 Nicotiana tabacum HOM05D002009 ORTHO05D006831 3.0e-17 92.4 71 67.6
Manes.09G167800 Manihot esculenta HOM05D002009 ORTHO05D006831 3.9e-17 92.0 71 63.4
Prupe.6G324000 Prunus persica HOM05D002009 ORTHO05D006831 3.9e-17 92.0 71 63.4
SMO146G0384 Selaginella moellendorffii HOM05D002009 ORTHO05D006831 3.9e-17 92.0 76 63.2
AUR62000811 Chenopodium quinoa HOM05D002009 ORTHO05D006831 5.0e-17 91.7 71 67.6
PSO210G3028 Papaver somniferum HOM05D002009 ORTHO05D006831 5.0e-17 91.7 67 68.7
CAN.G1034.31 Capsicum annuum HOM05D002009 ORTHO05D006831 6.6e-17 91.3 71 67.6
PSO170G1195 Papaver somniferum HOM05D002009 ORTHO05D006831 6.6e-17 91.3 80 58.8
Pp3c2_33440 Physcomitrium patens HOM05D002009 ORTHO05D006831 6.6e-17 91.3 66 65.2
ATR0706G256 Amborella trichopoda HOM05D002009 ORTHO05D006831 8.6e-17 90.9 71 67.6
CANSAT54G3017 Cannabis sativa HOM05D002009 ORTHO05D006831 8.6e-17 90.9 67 67.2
AUR62005157 Chenopodium quinoa HOM05D002009 ORTHO05D006831 8.6e-17 90.9 71 67.6
Cre09.g387400 Chlamydomonas reinhardtii HOM05D002009 ORTHO05D006831 1.1e-16 90.5 71 64.8
Gohir.A08G210100 Gossypium hirsutum HOM05D002009 ORTHO05D006831 1.5e-16 90.1 71 64.8
CBR_g26315 Chara braunii HOM05D002009 ORTHO05D006831 2.5e-16 89.4 67 67.2
SEGI_27212 Sequoiadendron giganteum HOM05D002009 ORTHO05D006831 2.5e-16 89.4 71 64.8
Ah.04g160310 Amaranthus hybridus HOM05D002009 ORTHO05D006831 7.3e-16 87.8 71 64.8
FvH4_6g06120 Fragaria vesca HOM05D002009 ORTHO05D006831 9.5e-16 87.4 71 62.0
FAN02G0878 Fragaria x ananassa HOM05D002009 ORTHO05D006831 9.5e-16 87.4 71 62.0
FAN14G2713 Fragaria x ananassa HOM05D002009 ORTHO05D006831 9.5e-16 87.4 71 62.0
RcHm_v2.0_Chr3g0455131 Rosa chinensis HOM05D002009 ORTHO05D006831 1.2e-15 87.0 71 62.0
FAN09G2733 Fragaria x ananassa HOM05D002009 ORTHO05D006831 2.8e-15 85.9 71 60.6
Mapoly0082s0049 Marchantia polymorpha HOM05D002009 ORTHO05D006831 6.2e-15 84.7 71 60.6
AagrBONN_evm.TU.Sc2ySwM_362.1967 Anthoceros agrestis HOM05D002009 ORTHO05D006831 2.3e-14 82.8 71 60.6
MD05G1053900 Malus domestica HOM05D002009 ORTHO05D006831 2.3e-14 82.8 64 62.5
Cfa024282 Carpinus fangiana HOM05D002009 ORTHO05D006831 5.2e-14 81.6 66 59.1
Rhsim07G0184000 Rhododendron simsii HOM05D002009 ORTHO05D006831 5.8e-13 78.2 105 42.9
MCO12G390 Micromonas commoda HOM05D002009 ORTHO05D006831 1.7e-12 76.6 64 57.8
PRCOL_00003841 Prasinoderma coloniale HOM05D002009 ORTHO05D006831 3.0e-09 65.9 73 53.4
Haze_26679 Corylus avellana HOM05D002009 ORTHO05D006831 5.6e-08 61.6 59 47.5


User provided reference genes

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