Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 1.6e-252 875.5 436 100.0
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 2.8e-212 741.9 438 83.3
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 4.1e-211 738.0 436 82.8
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 3.5e-210 734.9 436 82.6
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 2.9e-201 705.3 464 75.2
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 6.6e-193 677.6 435 76.1
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 8.9e-190 667.2 435 75.4
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 1.5e-189 666.4 458 72.7
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 1.5e-189 666.4 435 74.9
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 3.4e-189 665.2 435 74.7
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 1.7e-188 662.9 419 75.4
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 3.7e-188 661.8 417 76.7
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 3.7e-188 661.8 435 74.3
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 4.6e-186 654.8 432 75.9
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 7.8e-186 654.1 421 75.3
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 1.0e-185 653.7 421 75.1
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 1.0e-185 653.7 421 74.6
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 1.5e-184 649.8 427 73.5
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 3.3e-184 648.7 419 74.9
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 4.3e-184 648.3 420 76.4
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 4.3e-184 648.3 427 73.8
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 1.6e-183 646.4 436 72.5
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 3.6e-183 645.2 419 74.5
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 4.7e-183 644.8 419 74.5
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 5.2e-182 641.3 429 72.7
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 6.8e-182 641.0 419 73.5
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 2.0e-181 639.4 419 74.5
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 2.6e-181 639.0 450 69.8
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 4.4e-181 638.3 420 74.3
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 1.3e-180 636.7 435 72.2
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 4.9e-180 634.8 437 72.5
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 4.1e-179 631.7 422 73.7
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 7.0e-179 630.9 436 71.1
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 9.2e-179 630.6 421 71.0
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 2.1e-178 629.4 422 73.2
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 2.1e-178 629.4 421 72.7
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 2.7e-178 629.0 437 70.3
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 3.5e-178 628.6 421 70.8
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 1.0e-177 627.1 421 70.5
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 2.3e-177 625.9 436 69.0
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 1.1e-176 623.6 421 72.0
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 1.5e-176 623.2 436 69.5
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 1.2e-175 620.2 435 68.3
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 2.3e-174 615.9 422 71.1
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 3.1e-174 615.5 421 71.0
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 4.0e-174 615.1 422 70.9
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 4.0e-174 615.1 421 71.3
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 1.3e-172 610.1 421 70.5
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 1.3e-172 610.1 421 70.5
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 2.9e-172 609.0 421 68.2
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 3.7e-172 608.6 422 70.9
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 3.7e-172 608.6 422 69.7
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 3.7e-172 608.6 435 70.1
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 8.3e-172 607.4 420 70.2
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 8.3e-172 607.4 421 69.1
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 1.9e-171 606.3 421 70.1
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 4.1e-171 605.1 413 70.9
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 1.6e-170 603.2 419 69.7
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 1.6e-170 603.2 419 69.7
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 2.1e-170 602.8 421 69.1
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 2.7e-170 602.4 432 65.7
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 4.6e-170 601.7 421 69.8
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 7.8e-170 600.9 422 70.6
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 7.8e-170 600.9 422 69.7
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 1.7e-169 599.7 420 69.5
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 1.7e-169 599.7 431 67.7
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 1.5e-168 596.7 421 69.4
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 1.5e-168 596.7 422 69.7
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 1.5e-168 596.7 431 67.3
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 5.6e-168 594.7 435 66.4
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 1.6e-167 593.2 422 69.0
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 1.6e-167 593.2 529 59.7
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 6.2e-167 591.3 439 67.9
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 1.1e-166 590.5 436 65.8
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 1.4e-166 590.1 419 68.7
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 4.0e-166 588.6 419 68.0
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 4.0e-166 588.6 434 66.8
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 2.0e-165 586.3 425 69.2
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 2.0e-165 586.3 423 68.8
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 7.6e-165 584.3 423 68.8
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 9.9e-165 583.9 424 68.2
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 9.9e-165 583.9 423 68.8
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 1.7e-164 583.2 423 68.8
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 2.9e-164 582.4 429 67.1
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 3.8e-164 582.0 422 68.2
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 4.9e-164 581.6 423 68.8
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 6.4e-164 581.3 422 68.2
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 8.4e-164 580.9 436 65.4
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 5.4e-163 578.2 430 67.7
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 5.4e-163 578.2 484 60.7
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 2.1e-162 576.2 422 68.0
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 5.6e-160 568.2 422 65.2
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 7.3e-160 567.8 421 66.0
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 1.8e-158 563.1 421 65.6
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 6.9e-158 561.2 421 65.3
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 1.2e-157 560.5 421 65.3
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 1.5e-157 560.1 355 76.1
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 2.6e-157 559.3 418 64.1
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 7.6e-157 557.8 437 66.4
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 4.2e-155 552.0 416 65.6
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 1.9e-152 543.1 421 63.7
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 1.9e-152 543.1 422 61.8
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 9.0e-150 534.3 424 59.7
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 1.5e-141 506.9 424 61.3
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 1.7e-140 503.4 429 55.2
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 6.4e-140 501.5 335 73.7
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 8.2e-135 484.6 421 55.8
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 4.2e-131 472.2 422 53.1
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 1.4e-126 457.2 423 52.2
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 5.9e-125 451.8 350 64.6
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 2.1e-122 443.4 295 73.9
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 3.7e-119 432.6 432 54.9
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 6.9e-118 428.3 426 49.1
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 7.4e-112 408.3 276 71.4
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 1.6e-106 390.6 421 50.8
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 1.1e-104 384.4 270 68.9
Nn5g28766 Nelumbo nucifera HOM05D006203 ORTHO05D007675 1.7e-87 327.4 195 79.5
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 1.1e-86 324.7 412 43.7
MSTRG.1091 Avicennia marina HOM05D006203 ORTHO05D007675 1.1e-83 314.7 183 83.6
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 2.9e-76 290.0 254 56.3
C06p00250 Brassica napus HOM05D006203 ORTHO05D007675 4.0e-65 253.1 292 49.7
Dinv41070 Davidia involucrata HOM05D006203 ORTHO05D007675 3.6e-50 203.4 137 73.7
PGSC0003DMG401024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 3.3e-35 153.7 104 70.2
BraA02t06509Z Brassica rapa HOM05D006203 ORTHO05D007675 1.6e-29 134.8 89 69.7
SHI09073 Sapria himalayana HOM05D006203 ORTHO05D007675 3.5e-29 133.7 90 64.4
Peaxi162Scf00599g00124 Petunia axillaris HOM05D006203 ORTHO05D007675 5.1e-28 129.8 88 70.5
Cre01.g033050 Chlamydomonas reinhardtii HOM05D006203 ORTHO05D007675 8.7e-12 75.9 356 24.2
PSO063G4868 Papaver somniferum HOM05D006203 ORTHO05D007675 1.1e-09 68.9 88 44.3
CSS0028086 Camellia sinensis var. sinensis HOM05D001336 ORTHO05D001211 2.6e-08 64.3 42 64.3


User provided reference genes

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