Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold247G44836 Striga asiatica HOM05D046245 ORTHO05D401137 5.5e-253 877.1 427 100.0
SGA_v2.0_scaffold2G01213 Striga asiatica HOM05D000084 ORTHO05D006510 4.7e-34 149.8 134 61.2
SGA_v2.0_scaffold44G16547 Striga asiatica HOM05D004547 ORTHO05D005133 7.4e-32 142.5 136 58.1
Migut.J01141 Erythranthe guttata HOM05D000084 ORTHO05D006510 1.9e-27 127.9 132 52.3
SalBow6G1481 Salvia bowleyana HOM05D000084 ORTHO05D006510 3.6e-26 123.6 134 50.7
DCAR_006483 Daucus carota HOM05D000084 ORTHO05D006510 3.0e-25 120.6 129 50.4
Nitab4.5_0003733g0030 Nicotiana tabacum HOM05D000084 ORTHO05D006510 5.2e-25 119.8 129 49.6
Gohir.A07G005100 Gossypium hirsutum HOM05D000084 ORTHO05D006510 8.8e-25 119.0 123 50.4
Gorai.001G006600 Gossypium raimondii HOM05D000084 ORTHO05D006510 8.8e-25 119.0 123 50.4
Nitab4.5_0004391g0030 Nicotiana tabacum HOM05D000084 ORTHO05D006510 8.8e-25 119.0 123 51.2
Peaxi162Scf01363g00027 Petunia axillaris HOM05D000084 ORTHO05D006510 1.2e-24 118.6 134 47.8
Duzib150G0885 Durio zibethinus HOM05D000084 ORTHO05D006510 1.5e-24 118.2 123 51.2
Manes.03G023300 Manihot esculenta HOM05D000084 ORTHO05D006510 3.4e-24 117.1 128 47.7
Thecc.09G106800 Theobroma cacao HOM05D000084 ORTHO05D006510 3.4e-24 117.1 123 50.4
COL.COLO4_34820 Corchorus olitorius HOM05D000084 ORTHO05D006510 4.4e-24 116.7 123 50.4
Gohir.D07G007000 Gossypium hirsutum HOM05D000084 ORTHO05D006510 7.5e-24 115.9 81 64.2
PGSC0003DMG400000305 Solanum tuberosum HOM05D000084 ORTHO05D006510 7.5e-24 115.9 126 47.6
CiPaw.03G228900 Carya illinoinensis HOM05D000084 ORTHO05D006510 1.3e-23 115.2 129 48.1
Haze_25774 Corylus avellana HOM05D000084 ORTHO05D006510 1.3e-23 115.2 129 48.1
Rhsim01G0101100 Rhododendron simsii HOM05D000084 ORTHO05D006510 1.3e-23 115.2 128 49.2
Actinidia20390 Actinidia chinensis HOM05D000084 ORTHO05D006510 1.7e-23 114.8 134 44.8
CAN.G1774.11 Capsicum annuum HOM05D000084 ORTHO05D006510 2.2e-23 114.4 135 47.4
AUR62021462 Chenopodium quinoa HOM05D000084 ORTHO05D006510 2.2e-23 114.4 128 47.7
CSS0015387 Camellia sinensis var. sinensis HOM05D000084 ORTHO05D006510 2.8e-23 114.0 134 46.3
CSS0020134 Camellia sinensis var. sinensis HOM05D000084 ORTHO05D006510 2.8e-23 114.0 134 46.3
Oeu002250.1 Olea europaea HOM05D000084 ORTHO05D006510 2.8e-23 114.0 76 68.4
CANSAT02G0004 Cannabis sativa HOM05D000084 ORTHO05D006510 4.8e-23 113.2 81 64.2
Hund26226 Selenicereus undatus HOM05D000084 ORTHO05D006510 4.8e-23 113.2 128 48.4
TWI63G0910 Tripterygium wilfordii HOM05D000084 ORTHO05D006510 4.8e-23 113.2 132 47.0
EL10Ac8g18438 Beta vulgaris HOM05D000084 ORTHO05D006510 6.3e-23 112.8 134 47.0
Solyc12g007200.2 Solanum lycopersicum HOM05D000084 ORTHO05D006510 6.3e-23 112.8 126 46.8
Sopen12g003180 Solanum pennellii HOM05D000084 ORTHO05D006510 6.3e-23 112.8 126 46.8
Cfa003233 Carpinus fangiana HOM05D000084 ORTHO05D006510 8.3e-23 112.5 129 46.5
Dinv36659 Davidia involucrata HOM05D000084 ORTHO05D006510 8.3e-23 112.5 123 48.8
vmacro20724 Vaccinium macrocarpon HOM05D000084 ORTHO05D006510 8.3e-23 112.5 128 46.9
MD15G1190500 Malus domestica HOM05D000084 ORTHO05D006510 1.8e-22 111.3 121 48.8
Cc06_g09960 Coffea canephora HOM05D000084 ORTHO05D006510 2.4e-22 110.9 134 47.0
Prupe.7G226600 Prunus persica HOM05D000084 ORTHO05D006510 2.4e-22 110.9 81 61.7
QL02p046152 Quercus lobata HOM05D000084 ORTHO05D006510 2.4e-22 110.9 81 63.0
AUR62010957 Chenopodium quinoa HOM05D000084 ORTHO05D006510 3.1e-22 110.5 128 46.1
Sabra18G0071200 Salix brachista HOM05D000084 ORTHO05D006510 4.1e-22 110.2 81 60.5
TWI34G0649 Tripterygium wilfordii HOM05D000084 ORTHO05D006510 4.1e-22 110.2 132 46.2
Dinv41626 Davidia involucrata HOM05D000084 ORTHO05D006510 7.0e-22 109.4 127 47.2
Peaxi162Scf00231g00328 Petunia axillaris HOM05D000084 ORTHO05D006510 9.1e-22 109.0 76 65.8
Medtr8g103240 Medicago truncatula HOM05D000084 ORTHO05D006510 1.2e-21 108.6 128 46.1
Cpa.g.sc23.77 Carica papaya HOM05D000084 ORTHO05D006510 1.6e-21 108.2 123 47.2
Potri.018G083300 Populus trichocarpa HOM05D000084 ORTHO05D006510 2.0e-21 107.8 81 59.3
Ca_17326_v3 Cicer arietinum L. HOM05D000084 ORTHO05D006510 2.7e-21 107.5 128 46.1
Lj4g0014422 Lotus japonicus HOM05D000084 ORTHO05D006510 2.7e-21 107.5 127 46.5
Phvul.004G165900 Phaseolus vulgaris HOM05D000084 ORTHO05D006510 2.7e-21 107.5 101 54.5
TPR.G23474 Trifolium pratense HOM05D000084 ORTHO05D006510 2.7e-21 107.5 123 47.2
Ciclev10008156m.g Citrus clementina HOM05D000084 ORTHO05D006510 3.5e-21 107.1 132 44.7
VMungo0251G3104 Vigna mungo HOM05D000084 ORTHO05D006510 4.5e-21 106.7 128 46.1
HanXRQChr03g0061471 Helianthus annuus HOM05D000084 ORTHO05D006510 5.9e-21 106.3 124 47.6
Glyma.05G229800 Glycine max HOM05D000084 ORTHO05D006510 7.7e-21 105.9 81 61.7
RcHm_v2.0_Chr2g0091141 Rosa chinensis HOM05D000084 ORTHO05D006510 7.7e-21 105.9 127 44.1
arahy.Tifrunner.gnm1.ann1.HT6INV Arachis hypogaea HOM05D000084 ORTHO05D006510 1.3e-20 105.1 81 61.7
FvH4_1g05460 Fragaria vesca HOM05D000084 ORTHO05D006510 1.3e-20 105.1 123 47.2
Lalb_Chr24g0397421 Lupinus albus HOM05D000084 ORTHO05D006510 1.3e-20 105.1 78 61.5
Nn3g18105 Nelumbo nucifera HOM05D000084 ORTHO05D006510 1.3e-20 105.1 81 56.8
ECA240G2238 Erigeron canadensis HOM05D000084 ORTHO05D006510 1.7e-20 104.8 130 44.6
FAN19G1244 Fragaria x ananassa HOM05D000084 ORTHO05D006510 1.7e-20 104.8 123 46.3
Glyma.09G192600 Glycine max HOM05D000084 ORTHO05D006510 1.7e-20 104.8 108 50.0
Phvul.002G312000 Phaseolus vulgaris HOM05D000084 ORTHO05D006510 1.7e-20 104.8 81 59.3
TAR624G0760 Trochodendron aralioides HOM05D000084 ORTHO05D006510 1.7e-20 104.8 76 59.2
GSVIVG01015360001 Vitis vinifera HOM05D000084 ORTHO05D006510 1.7e-20 104.8 134 44.8
Glyma.08G037300 Glycine max HOM05D000084 ORTHO05D006510 2.2e-20 104.4 81 61.7
MD02G1062700 Malus domestica HOM05D000084 ORTHO05D006510 2.2e-20 104.4 121 46.3
Hund09219 Selenicereus undatus HOM05D000084 ORTHO05D006510 2.2e-20 104.4 76 61.8
Sc18g0001300 Simmondsia chinensis HOM05D000084 ORTHO05D006510 2.9e-20 104.0 123 46.3
Atru.BG.25.p Acer truncatum HOM05D000084 ORTHO05D006510 3.8e-20 103.6 132 43.9
Aa31LG2G21310 Aethionema arabicum HOM05D000084 ORTHO05D006510 3.8e-20 103.6 78 57.7
Ah.07g205480 Amaranthus hybridus HOM05D000084 ORTHO05D006510 3.8e-20 103.6 128 45.3
Os06g0334400 Oryza sativa ssp. japonica HOM05D000084 ORTHO05D006510 3.8e-20 103.6 133 43.6
Psat7g015120 Pisum sativum HOM05D000084 ORTHO05D006510 3.8e-20 103.6 123 47.2
BcaNung01340 Brassica carinata HOM05D000084 ORTHO05D006510 5.0e-20 103.2 78 56.4
ClCG11G002360 Citrullus lanatus HOM05D000084 ORTHO05D006510 5.0e-20 103.2 78 60.3
Lj4A455G36 Lonicera japonica HOM05D000084 ORTHO05D006510 5.0e-20 103.2 76 60.5
Lj4C435G7 Lonicera japonica HOM05D000084 ORTHO05D006510 5.0e-20 103.2 76 60.5
Ah.13g070400 Amaranthus hybridus HOM05D000084 ORTHO05D006510 8.5e-20 102.4 123 45.5
Thhalv10025049m.g Eutrema salsugineum HOM05D000084 ORTHO05D006510 8.5e-20 102.4 81 54.3
AL7G23480 Arabidopsis lyrata HOM05D000084 ORTHO05D006510 1.1e-19 102.1 78 56.4
Eucgr.C01269 Eucalyptus grandis HOM05D000084 ORTHO05D006510 1.1e-19 102.1 78 62.8
Lalb_Chr05g0223001 Lupinus albus HOM05D000084 ORTHO05D006510 1.1e-19 102.1 81 61.7
Lsat_1_v5_gn_7_42060 Lactuca sativa HOM05D000084 ORTHO05D006510 1.5e-19 101.7 131 43.5
Psat1g041480 Pisum sativum HOM05D000084 ORTHO05D006510 1.5e-19 101.7 78 59.0
arahy.Tifrunner.gnm1.ann1.59QKRW Arachis hypogaea HOM05D000084 ORTHO05D006510 1.9e-19 101.3 81 60.5
Carub.0007s1166 Capsella rubella HOM05D000084 ORTHO05D006510 1.9e-19 101.3 81 51.9
FAN26G1191 Fragaria x ananassa HOM05D000084 ORTHO05D006510 1.9e-19 101.3 124 45.2
FAN26G2733 Fragaria x ananassa HOM05D000084 ORTHO05D006510 1.9e-19 101.3 124 45.2
THA.LOC104814556 Tarenaya hassleriana HOM05D000084 ORTHO05D006510 1.9e-19 101.3 78 55.1
arahy.Tifrunner.gnm1.ann1.TVRM18 Arachis hypogaea HOM05D000084 ORTHO05D006510 2.5e-19 100.9 81 60.5
FAN28G2964 Fragaria x ananassa HOM05D000084 ORTHO05D006510 2.5e-19 100.9 124 45.2
BraA01t00847Z Brassica rapa HOM05D000084 ORTHO05D006510 3.2e-19 100.5 78 56.4
Zm00001eb278130 Zea mays HOM05D000084 ORTHO05D006510 3.2e-19 100.5 134 42.5
FAN23G1577 Fragaria x ananassa HOM05D002640 ORTHO05D006510 4.2e-19 100.1 124 45.2
AT4G28980 Arabidopsis thaliana HOM05D000084 ORTHO05D006510 5.5e-19 99.8 76 55.3
Medtr6g087920 Medicago truncatula HOM05D000084 ORTHO05D006510 5.5e-19 99.8 81 58.0
Nn2g11673 Nelumbo nucifera HOM05D000084 ORTHO05D006510 5.5e-19 99.8 124 44.4
MELO3C004567.2 Cucumis melo HOM05D000084 ORTHO05D006510 7.2e-19 99.4 78 59.0
BcaNung00442 Brassica carinata HOM05D000084 ORTHO05D006510 1.2e-18 98.6 98 46.9
BolC1t01016H Brassica oleracea HOM05D001777 ORTHO05D006510 1.2e-18 98.6 81 53.1
CARHR236710 Cardamine hirsuta HOM05D000084 ORTHO05D006510 1.2e-18 98.6 81 51.9
Sed0025602 Sechium edule HOM05D000084 ORTHO05D006510 1.2e-18 98.6 78 55.1
VMungo0464G0290 Vigna mungo HOM05D000084 ORTHO05D006510 1.2e-18 98.6 78 60.3
Ca_25542_v3 Cicer arietinum L. HOM05D000084 ORTHO05D006510 2.7e-18 97.4 78 56.4
TPR.G28416 Trifolium pratense HOM05D000084 ORTHO05D006510 2.7e-18 97.4 81 55.6
HPP92_005268 Vanilla planifolia HOM05D000346 ORTHO05D006510 3.6e-18 97.1 78 59.0
A01p08990 Brassica napus HOM05D001777 ORTHO05D006510 6.1e-18 96.3 78 52.6
PGR142G1818 Punica granatum HOM05D000084 ORTHO05D006510 6.1e-18 96.3 134 41.8
MBI04_g04852_MAGBIO Magnolia biondii HOM05D000084 ORTHO05D006510 8.0e-18 95.9 134 41.8
Glyma.07G084300 Glycine max HOM05D000084 ORTHO05D006510 1.0e-17 95.5 125 42.4
C01p10530 Brassica napus HOM05D001777 ORTHO05D006510 1.4e-17 95.1 78 51.3
CsaV3_2G002150 Cucumis sativus L. HOM05D000084 ORTHO05D006510 1.8e-17 94.7 78 57.7
Sp7g26920 Schrenkiella parvula HOM05D000084 ORTHO05D006510 2.3e-17 94.4 81 49.4
TAR636G2755 Trochodendron aralioides HOM05D000084 ORTHO05D006510 2.3e-17 94.4 73 60.3
PSO339G3930 Papaver somniferum HOM05D000084 ORTHO05D006510 3.0e-17 94.0 128 39.8
PSO801G0738 Papaver somniferum HOM05D000084 ORTHO05D006510 1.2e-16 92.0 128 39.1
CiPaw.04G162400 Carya illinoinensis HOM05D000084 ORTHO05D006510 1.5e-16 91.7 78 56.4
unitig_27.g24906 Utricularia gibba HOM05D000084 ORTHO05D006510 1.5e-16 91.7 129 40.3
SGA_v2.0_scaffold161G37875 Striga asiatica HOM05D046245 ORTHO05D399799 7.5e-16 89.4 65 73.8
Aqoxy7G01577 Aquilegia oxysepala HOM05D000084 ORTHO05D006510 9.8e-16 89.0 78 48.7
arahy.Tifrunner.gnm1.ann1.MYD2LQ Arachis hypogaea HOM05D000084 ORTHO05D006510 6.3e-15 86.3 81 46.9
BcaC09g51674 Brassica carinata HOM05D000084 ORTHO05D006510 6.3e-15 86.3 71 53.5
ATR0315G137 Amborella trichopoda HOM05D000084 ORTHO05D006510 5.4e-14 83.2 81 45.7
arahy.Tifrunner.gnm1.ann1.Z2KR9B Arachis hypogaea HOM05D000084 ORTHO05D006510 7.0e-14 82.8 81 45.7
CAN.G835.3 Capsicum annuum HOM05D000084 ORTHO05D006510 5.9e-13 79.7 70 58.6
CDE05G0013 Ceratophyllum demersum HOM05D000084 ORTHO05D006510 4.1e-06 57.0 62 48.4
SMO340G0302 Selaginella moellendorffii HOM05D000084 ORTHO05D006510 5.4e-06 56.6 78 32.1


User provided reference genes

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