Gene: AT4G28980

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G28980
  • Transcript Identifier AT4G28980.1
  • Gene Type Coding gene
  • Location Chr4 : 14288471-14290102 : positive

Gene Family Information

  • ID HOM05D000084
  • #Genes/#Species 3652/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G28980.1
  • symbol CAK1AT
  • Alias CDKF%3B1,CYCLIN-DEPENDENT KINASE F%3B1
  • uniprot O80345

Descriptions

  • Description CDK-activating kinase 1AT
  • Computational description CDK-activating kinase 1AT (CAK1AT); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase D1;3 (TAIR:AT1G18040.1); Has 87352 Blast hits to 72841 proteins in 3452 species: Archae - 58; Bacteria - 8929; Metazoa - 34591; Fungi - 11921; Plants - 15740; Viruses - 134; Other Eukaryotes - 15979 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016310
IEA
GOA Databasephosphorylation
GO:0007049
IEA
GOA Databasecell cycle
GO:0051301
IEA
GOA Databasecell division
GO:0006468
IEA
GOA Databaseprotein phosphorylation
GO:0006468
IDA
IBA
Gene Ontologyprotein phosphorylation1 2
GO:0006468
IEA
InterProprotein phosphorylation
GO:0010078
IMP
Gene Ontologymaintenance of root meristem identity3
GO:0000079
TAS
Gene Ontologyregulation of cyclin-dependent protein serine/threonine kinase activity4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004693
IBA
IEA
GOA Databasecyclin-dependent protein serine/threonine kinase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0004674
IEA
GOA Databaseprotein serine/threonine kinase activity
GO:0004674
TAS
Gene Ontologyprotein serine/threonine kinase activity4
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0016301
IEA
GOA Databasekinase activity
GO:0004672
IEA
GOA Databaseprotein kinase activity
GO:0004672
IEA
InterProprotein kinase activity
GO:0019912
IGI
IBA
Gene Ontologycyclin-dependent protein kinase activating kinase activity1 2
GO:0005515
IPI
Gene Ontologyprotein binding5
GO:0008353
IEA
GOA DatabaseRNA polymerase II CTD heptapeptide repeat kinase activity
GO:0008353
IBA
Gene OntologyRNA polymerase II CTD heptapeptide repeat kinase activity2
GO:0106311
IEA
GOA Databaseprotein threonine kinase activity
GO:0106310
IEA
GOA Databaseprotein serine kinase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IDA
GOA Databasecytoplasm
GO:0005737
HDA
ISM
Gene Ontologycytoplasm6
GO:0005634
IDA
GOA Databasenucleus
GO:0005634
HDA
IBA
Gene Ontologynucleus2 6
GO:0005829
IDA
GOA Databasecytosol
GO:0016592
IBA
Gene Ontologymediator complex2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000719 Protein kinase domain
IPR011009 Protein kinase-like domain superfamily
Mapman id Description
13.1.1.2.6 Cell cycle organisation.cell cycle control.cyclin-dependent regulation.cyclin-dependent protein kinase complex.catalytic component CDKF
18.4.3.1.6 Protein modification.phosphorylation.CMGC protein kinase superfamily.CDK protein kinase families.protein kinase (CDKF/CDK20)