Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold23G10206 Striga asiatica HOM05D006178 ORTHO05D007504 1.6e-157 559.3 275 100.0
Migut.E00482 Erythranthe guttata HOM05D006178 ORTHO05D007504 8.5e-114 414.1 279 75.6
SalBow2G2905 Salvia bowleyana HOM05D006178 ORTHO05D007504 1.8e-108 396.4 280 70.0
Oeu044010.1 Olea europaea HOM05D006178 ORTHO05D007504 1.6e-104 383.3 279 68.5
Cc11_g07280 Coffea canephora HOM05D006178 ORTHO05D007504 3.3e-89 332.4 279 60.9
PGSC0003DMG400028747 Solanum tuberosum HOM05D006178 ORTHO05D007504 7.3e-89 331.3 278 60.1
Solyc07g008850.3 Solanum lycopersicum HOM05D006178 ORTHO05D007504 4.0e-87 325.5 278 59.4
CAN.G511.14 Capsicum annuum HOM05D006178 ORTHO05D007504 1.2e-86 323.9 277 59.2
Sopen07g004780 Solanum pennellii HOM05D006178 ORTHO05D007504 1.5e-86 323.6 282 59.2
GSVIVG01011660001 Vitis vinifera HOM05D006178 ORTHO05D007504 7.5e-86 321.2 280 59.3
unitig_22.g5599 Utricularia gibba HOM05D000369 ORTHO05D000253 1.7e-85 320.1 261 65.5
Actinidia38440 Actinidia chinensis HOM05D006178 ORTHO05D007504 6.4e-85 318.2 277 58.5
FvH4_4g33550 Fragaria vesca HOM05D006178 ORTHO05D007504 3.2e-84 315.8 278 59.4
Hma1.2p1_0277F.1_g111690 Hydrangea macrophylla HOM05D006178 ORTHO05D007504 4.1e-84 315.5 280 58.6
CiPaw.05G188700 Carya illinoinensis HOM05D006178 ORTHO05D007504 5.4e-84 315.1 279 58.4
FAN07G2930 Fragaria x ananassa HOM05D006178 ORTHO05D007504 9.2e-84 314.3 278 59.0
Psat6g046400 Pisum sativum HOM05D006178 ORTHO05D007504 1.6e-83 313.5 279 57.0
Lj2g0017740 Lotus japonicus HOM05D006178 ORTHO05D007504 1.7e-82 310.1 279 57.0
Lalb_Chr17g0338441 Lupinus albus HOM05D006178 ORTHO05D007504 2.3e-82 309.7 282 57.4
MD13G1020300 Malus domestica HOM05D006178 ORTHO05D007504 5.1e-82 308.5 279 57.7
FAN12G1191 Fragaria x ananassa HOM05D006178 ORTHO05D007504 1.5e-81 307.0 290 56.6
FAN22G2090 Fragaria x ananassa HOM05D006178 ORTHO05D007504 2.5e-81 306.2 290 56.6
HanXRQChr15g0476731 Helianthus annuus HOM05D006178 ORTHO05D007504 2.5e-81 306.2 282 56.4
Prupe.1G333400 Prunus persica HOM05D006178 ORTHO05D007504 2.5e-81 306.2 279 58.1
Duzib251G0568 Durio zibethinus HOM05D006178 ORTHO05D007504 3.3e-81 305.8 278 57.6
Glyma.02G085100 Glycine max HOM05D006178 ORTHO05D007504 1.2e-80 303.9 279 56.6
Medtr1g032430 Medicago truncatula HOM05D006178 ORTHO05D007504 1.2e-80 303.9 279 54.8
Atru.chr11.922 Acer truncatum HOM05D006178 ORTHO05D007504 2.8e-80 302.8 278 56.5
FAN17G1905 Fragaria x ananassa HOM05D006178 ORTHO05D007504 2.8e-80 302.8 289 56.1
Ah.02g128010 Amaranthus hybridus HOM05D006178 ORTHO05D007504 3.6e-80 302.4 285 55.8
CsaV3_5G015780 Cucumis sativus L. HOM05D006178 ORTHO05D007504 3.6e-80 302.4 276 54.3
Ca_12542_v3 Cicer arietinum L. HOM05D006178 ORTHO05D007504 6.2e-80 301.6 279 54.8
Thecc.02G292800 Theobroma cacao HOM05D006178 ORTHO05D007504 6.2e-80 301.6 277 56.3
Lj6C738G3 Lonicera japonica HOM05D001486 ORTHO05D007504 8.1e-80 301.2 264 59.1
Potri.010G106400 Populus trichocarpa HOM05D006178 ORTHO05D007504 1.1e-79 300.8 278 56.8
PSO017G4246 Papaver somniferum HOM05D006178 ORTHO05D007504 1.8e-79 300.1 280 55.7
QL03p035908 Quercus lobata HOM05D006178 ORTHO05D007504 3.1e-79 299.3 309 53.1
EL10Ac2g02672 Beta vulgaris HOM05D006178 ORTHO05D007504 5.2e-79 298.5 278 56.1
DCAR_007330 Daucus carota HOM05D006178 ORTHO05D007504 8.9e-79 297.7 264 58.3
TWI74G1561 Tripterygium wilfordii HOM05D006178 ORTHO05D007504 1.2e-78 297.4 274 56.2
Manes.15G134200 Manihot esculenta HOM05D006178 ORTHO05D007504 2.0e-78 296.6 293 53.9
PSO478G4000 Papaver somniferum HOM05D006178 ORTHO05D007504 2.6e-78 296.2 280 55.0
Eucgr.B02675 Eucalyptus grandis HOM05D006178 ORTHO05D007504 4.4e-78 295.4 277 55.2
Ciclev10015964m.g Citrus clementina HOM05D006178 ORTHO05D007504 7.6e-78 294.7 281 53.7
ClCG09G011820 Citrullus lanatus HOM05D006178 ORTHO05D007504 1.7e-77 293.5 269 55.4
Cpa.g.sc2.193 Carica papaya HOM05D006178 ORTHO05D007504 8.4e-77 291.2 279 55.6
MELO3C016656.2 Cucumis melo HOM05D006178 ORTHO05D007504 1.1e-76 290.8 293 52.2
THA.LOC104821906 Tarenaya hassleriana HOM05D006178 ORTHO05D007504 1.1e-76 290.8 278 53.2
Gorai.002G172000 Gossypium raimondii HOM05D006178 ORTHO05D007504 1.4e-76 290.4 278 54.7
ECA246G2474 Erigeron canadensis HOM05D006178 ORTHO05D007504 2.4e-76 289.7 282 55.3
Gohir.A01G146700 Gossypium hirsutum HOM05D006178 ORTHO05D007504 3.2e-76 289.3 278 54.3
TPR.G36937 Trifolium pratense HOM05D006178 ORTHO05D007504 3.2e-76 289.3 280 53.9
Gohir.D01G139900 Gossypium hirsutum HOM05D006178 ORTHO05D007504 4.1e-76 288.9 278 54.3
Sc04g0008610 Simmondsia chinensis HOM05D006178 ORTHO05D007504 7.1e-76 288.1 282 53.2
Phvul.003G019200 Phaseolus vulgaris HOM05D006178 ORTHO05D007504 4.6e-75 285.4 257 56.4
Peaxi162Scf00937g00336 Petunia axillaris HOM05D006178 ORTHO05D007504 1.7e-74 283.5 263 57.0
arahy.Tifrunner.gnm1.ann1.M99K8C Arachis hypogaea HOM05D006178 ORTHO05D007504 1.5e-73 280.4 279 54.1
Sp1g23080 Schrenkiella parvula HOM05D006178 ORTHO05D007504 1.9e-73 280.0 276 51.8
arahy.Tifrunner.gnm1.ann1.56CUD8 Arachis hypogaea HOM05D006178 ORTHO05D007504 5.6e-73 278.5 279 53.8
AL1G40190 Arabidopsis lyrata HOM05D006178 ORTHO05D007504 9.6e-73 277.7 276 51.8
A08p26780 Brassica napus HOM05D006178 ORTHO05D007504 9.6e-73 277.7 276 51.4
COL.COLO4_16591 Corchorus olitorius HOM05D006178 ORTHO05D007504 9.6e-73 277.7 263 55.9
Aqoxy3G00007 Aquilegia oxysepala HOM05D006178 ORTHO05D007504 1.2e-72 277.3 293 52.6
MBI13_g29562_MAGBIO Magnolia biondii HOM05D006178 ORTHO05D007504 1.2e-72 277.3 285 53.3
Lsat_1_v5_gn_3_53481 Lactuca sativa HOM05D006178 ORTHO05D007504 1.6e-72 276.9 266 55.6
Os03g0223900 Oryza sativa ssp. japonica HOM05D006178 ORTHO05D007504 2.8e-72 276.2 290 51.0
BcaB03g12042 Brassica carinata HOM05D006178 ORTHO05D007504 3.6e-72 275.8 276 51.1
Thhalv10007963m.g Eutrema salsugineum HOM05D006178 ORTHO05D007504 8.1e-72 274.6 276 51.4
Carub.0001s2539 Capsella rubella HOM05D006178 ORTHO05D007504 1.1e-71 274.2 276 50.7
AT1G24793 Arabidopsis thaliana HOM05D006178 ORTHO05D007504 4.0e-71 272.3 276 50.4
AT1G25054 Arabidopsis thaliana HOM05D006178 ORTHO05D007504 4.0e-71 272.3 276 50.4
AT1G25145 Arabidopsis thaliana HOM05D006178 ORTHO05D007504 4.0e-71 272.3 276 50.4
AT1G25210 Arabidopsis thaliana HOM05D006178 ORTHO05D007504 4.0e-71 272.3 276 50.4
Hund24927 Selenicereus undatus HOM05D006178 ORTHO05D007504 8.9e-71 271.2 363 42.1
Zm00001eb009130 Zea mays HOM05D006178 ORTHO05D007504 8.9e-71 271.2 294 50.7
BraA08t34624Z Brassica rapa HOM05D006178 ORTHO05D007504 1.5e-70 270.4 276 51.4
AUR62014248 Chenopodium quinoa HOM05D006178 ORTHO05D007504 9.9e-70 267.7 262 54.6
AUR62038473 Chenopodium quinoa HOM05D006178 ORTHO05D007504 6.4e-69 265.0 262 53.4
BcaC01g01670 Brassica carinata HOM05D006178 ORTHO05D007504 1.3e-66 257.3 309 46.0
C03p73180 Brassica napus HOM05D006178 ORTHO05D007504 1.5e-65 253.8 311 45.7
BolC3t19616H Brassica oleracea HOM05D006178 ORTHO05D007504 1.5e-65 253.8 311 45.7
Aa31LG7G9330 Aethionema arabicum HOM05D006178 ORTHO05D007504 2.8e-64 249.6 288 47.6
vmacro00552 Vaccinium macrocarpon HOM05D006178 ORTHO05D007504 3.1e-63 246.1 264 51.9
ATR0753G153 Amborella trichopoda HOM05D006178 ORTHO05D007504 9.9e-62 241.1 283 47.7
RcHm_v2.0_Chr7g0235121 Rosa chinensis HOM05D006178 ORTHO05D007504 1.3e-61 240.7 208 58.2
Sabra10G0077800 Salix brachista HOM05D006178 ORTHO05D007504 2.9e-61 239.6 263 50.6
Pp3c3_1850 Physcomitrium patens HOM05D006178 ORTHO05D007504 8.4e-61 238.0 282 45.7
Mapoly0012s0127 Marchantia polymorpha HOM05D006178 ORTHO05D007504 1.3e-58 230.7 309 43.4
Dinv07729 Davidia involucrata HOM05D006178 ORTHO05D007504 8.7e-58 228.0 215 57.2
HPP92_013128 Vanilla planifolia HOM05D006178 ORTHO05D007504 6.4e-53 211.8 249 49.8
Haze_10879 Corylus avellana HOM05D006178 ORTHO05D007504 1.1e-52 211.1 215 53.5
HPP92_013158 Vanilla planifolia HOM05D006178 ORTHO05D007504 2.7e-51 206.5 209 50.2
CANSAT01G0234 Cannabis sativa HOM05D006178 ORTHO05D007504 1.8e-47 193.7 218 52.3
Nitab4.5_0000018g0160 Nicotiana tabacum HOM05D006178 ORTHO05D007504 9.0e-47 191.4 194 54.6
CBR_g12524 Chara braunii HOM05D006178 ORTHO05D007504 1.3e-45 187.6 249 43.0
SMO232G0119 Selaginella moellendorffii HOM05D006178 ORTHO05D007504 2.9e-45 186.4 281 39.5
CDE05G0668 Ceratophyllum demersum HOM05D006178 ORTHO05D007504 3.0e-42 176.4 218 47.2
TAR629G1361 Trochodendron aralioides HOM05D006178 ORTHO05D007504 6.7e-42 175.3 106 71.7
Nitab4.5_0009975g0010 Nicotiana tabacum HOM05D006178 ORTHO05D007504 1.9e-41 173.7 218 46.8
Sed0021590 Sechium edule HOM05D006178 ORTHO05D007504 7.4e-41 171.8 194 49.5
CSS0007559 Camellia sinensis var. sinensis HOM05D006178 ORTHO05D007504 2.0e-38 163.7 109 67.0
CSS0004101 Camellia sinensis var. sinensis HOM05D006178 ORTHO05D007504 4.5e-38 162.5 109 66.1
CSS0001732 Camellia sinensis var. sinensis HOM05D006178 ORTHO05D007504 7.6e-38 161.8 132 65.2
CSS0005024 Camellia sinensis var. sinensis HOM05D006178 ORTHO05D007504 7.6e-38 161.8 132 65.2
MCO09G291 Micromonas commoda HOM05D006178 ORTHO05D007504 1.8e-34 150.6 279 35.8
QL03p035827 Quercus lobata HOM05D006178 ORTHO05D007504 1.6e-32 144.1 105 64.8
Gohir.D11G251901 Gossypium hirsutum HOM05D006178 ORTHO05D007504 1.2e-30 137.9 136 53.7
PRCOL_00001866 Prasinoderma coloniale HOM05D006178 ORTHO05D007504 1.2e-30 137.9 305 35.4
Gohir.D07G139600 Gossypium hirsutum HOM05D006178 ORTHO05D007504 5.0e-29 132.5 131 55.0
Gohir.D08G117400 Gossypium hirsutum HOM05D006178 ORTHO05D007504 6.5e-29 132.1 131 55.0
Gorai.001G151600 Gossypium raimondii HOM05D006178 ORTHO05D007504 8.5e-29 131.7 131 54.2
Gohir.D13G135551 Gossypium hirsutum HOM05D006178 ORTHO05D007504 1.1e-28 131.3 131 55.0
Gohir.D10G193800 Gossypium hirsutum HOM05D006178 ORTHO05D007504 3.2e-28 129.8 127 55.9
Gorai.010G050600 Gossypium raimondii HOM05D006178 ORTHO05D007504 2.1e-27 127.1 131 53.4
Gorai.005G149500 Gossypium raimondii HOM05D006178 ORTHO05D007504 3.6e-27 126.3 125 55.2
TAR629G3300 Trochodendron aralioides HOM05D006178 ORTHO05D007504 3.9e-26 122.9 133 50.4
Cre16.g653350 Chlamydomonas reinhardtii HOM05D006178 ORTHO05D007504 2.2e-24 117.1 274 30.7
Nn3g18365 Nelumbo nucifera HOM05D006178 ORTHO05D007504 5.3e-23 112.5 64 76.6
SEGI_10880 Sequoiadendron giganteum HOM05D006178 ORTHO05D007504 2.6e-22 110.2 134 47.8
Ca_29306_v3 Cicer arietinum L. HOM05D001616 ORTHO05D007504 4.5e-22 109.4 276 30.4
Gorai.005G145500 Gossypium raimondii HOM05D006178 ORTHO05D007504 5.9e-22 109.0 86 61.6
AagrBONN_evm.TU.Sc2ySwM_340.423 Anthoceros agrestis HOM05D006178 ORTHO05D007504 3.8e-21 106.3 145 44.1
CARHR026360 Cardamine hirsuta HOM05D006178 ORTHO05D007504 9.1e-15 85.1 78 59.0
Nn3g18364 Nelumbo nucifera HOM05D006178 ORTHO05D007504 4.5e-14 82.8 79 58.2
Gorai.009G391300 Gossypium raimondii HOM05D006178 ORTHO05D007504 3.8e-13 79.7 96 50.0
Gorai.007G245600 Gossypium raimondii HOM05D006178 ORTHO05D007504 5.5e-12 75.9 79 51.9
Gohir.D11G228700 Gossypium hirsutum HOM05D006178 ORTHO05D007504 2.7e-11 73.6 79 51.9
Sed0025662 Sechium edule HOM05D006178 ORTHO05D007504 3.6e-11 73.2 45 66.7


User provided reference genes

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