Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold23G10152 Striga asiatica HOM05D006224 ORTHO05D007691 3.4e-219 764.6 364 100.0
Migut.K00473 Erythranthe guttata HOM05D006224 ORTHO05D007691 2.1e-115 419.9 387 58.7
Cfa003290 Carpinus fangiana HOM05D006224 ORTHO05D007691 1.0e-114 417.5 357 61.3
Ciclev10008608m.g Citrus clementina HOM05D006224 ORTHO05D007691 1.0e-114 417.5 325 64.0
VMungo0464G0392 Vigna mungo HOM05D006224 ORTHO05D007691 6.6e-114 414.8 355 60.3
MD15G1189600 Malus domestica HOM05D006224 ORTHO05D007691 1.5e-113 413.7 329 64.1
Dinv41578 Davidia involucrata HOM05D006224 ORTHO05D007691 1.9e-113 413.3 361 58.7
Sopen07g017160 Solanum pennellii HOM05D006224 ORTHO05D007691 7.3e-113 411.4 366 57.7
Nitab4.5_0002361g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 9.6e-113 411.0 359 60.2
Nitab4.5_0013433g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 9.6e-113 411.0 321 63.9
Phvul.004G160700 Phaseolus vulgaris HOM05D006224 ORTHO05D007691 1.6e-112 410.2 383 57.4
QL02p086060 Quercus lobata HOM05D006224 ORTHO05D007691 8.1e-112 407.9 370 58.6
Lj2g0020407 Lotus japonicus HOM05D006224 ORTHO05D007691 1.1e-111 407.5 371 57.7
Cc06_g09350 Coffea canephora HOM05D006224 ORTHO05D007691 1.4e-111 407.1 327 62.4
Lalb_Chr14g0371331 Lupinus albus HOM05D006224 ORTHO05D007691 1.4e-111 407.1 332 61.7
Actinidia07421 Actinidia chinensis HOM05D006224 ORTHO05D007691 5.3e-111 405.2 363 58.7
PGSC0003DMG400024204 Solanum tuberosum HOM05D006224 ORTHO05D007691 5.3e-111 405.2 366 57.4
SalBow1G0968 Salvia bowleyana HOM05D006224 ORTHO05D007691 1.2e-110 404.1 345 59.1
Solyc07g009170.4 Solanum lycopersicum HOM05D006224 ORTHO05D007691 1.2e-110 404.1 366 57.4
Ca_30117_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 1.5e-110 403.7 360 58.6
Manes.16G071100 Manihot esculenta HOM05D006224 ORTHO05D007691 1.5e-110 403.7 360 58.6
GSVIVG01015431001 Vitis vinifera HOM05D006224 ORTHO05D007691 1.5e-110 403.7 368 57.9
Glyma.09G187600 Glycine max HOM05D006224 ORTHO05D007691 2.0e-110 403.3 387 55.6
HanXRQChr05g0138301 Helianthus annuus HOM05D006224 ORTHO05D007691 2.6e-110 402.9 363 57.9
TWI34G0303 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 4.4e-110 402.1 326 61.7
GSVIVG01015429001 Vitis vinifera HOM05D006224 ORTHO05D007691 7.6e-110 401.4 370 57.0
QL02p086023 Quercus lobata HOM05D006224 ORTHO05D007691 9.9e-110 401.0 377 57.3
arahy.Tifrunner.gnm1.ann1.X15ZNM Arachis hypogaea HOM05D006224 ORTHO05D007691 1.7e-109 400.2 329 60.5
Medtr6g086510 Medicago truncatula HOM05D006224 ORTHO05D007691 4.9e-109 398.7 386 56.5
arahy.Tifrunner.gnm1.ann1.NKB3PQ Arachis hypogaea HOM05D006224 ORTHO05D007691 6.4e-109 398.3 331 60.1
Potri.006G157700 Populus trichocarpa HOM05D006224 ORTHO05D007691 6.4e-109 398.3 324 60.5
Hund26119 Selenicereus undatus HOM05D006224 ORTHO05D007691 6.4e-109 398.3 326 61.3
Gohir.D08G261300 Gossypium hirsutum HOM05D006224 ORTHO05D007691 8.4e-109 397.9 381 56.4
RcHm_v2.0_Chr2g0091041 Rosa chinensis HOM05D006224 ORTHO05D007691 8.4e-109 397.9 354 58.5
DCAR_010440 Daucus carota HOM05D006224 ORTHO05D007691 1.4e-108 397.1 316 62.7
Gorai.004G279400 Gossypium raimondii HOM05D006224 ORTHO05D007691 1.9e-108 396.7 381 56.2
Atru.chr7.1298 Acer truncatum HOM05D006224 ORTHO05D007691 5.4e-108 395.2 325 61.5
FAN19G0264 Fragaria x ananassa HOM05D006224 ORTHO05D007691 5.4e-108 395.2 376 56.9
CANSAT56G1593 Cannabis sativa HOM05D006224 ORTHO05D007691 7.1e-108 394.8 368 56.8
Haze_25683 Corylus avellana HOM05D006224 ORTHO05D007691 7.1e-108 394.8 380 55.5
TAR383G0021 Trochodendron aralioides HOM05D006224 ORTHO05D007691 7.1e-108 394.8 327 59.9
Cpa.g.sc23.139 Carica papaya HOM05D006224 ORTHO05D007691 9.3e-108 394.4 370 57.0
Glyma.18G076000 Glycine max HOM05D006224 ORTHO05D007691 1.6e-107 393.7 337 60.5
Gohir.A08G240600 Gossypium hirsutum HOM05D006224 ORTHO05D007691 2.7e-107 392.9 380 55.3
Eucgr.E02819 Eucalyptus grandis HOM05D006224 ORTHO05D007691 3.5e-107 392.5 388 55.4
vmacro06195 Vaccinium macrocarpon HOM05D006224 ORTHO05D007691 4.6e-107 392.1 391 54.0
CANSAT56G0016 Cannabis sativa HOM05D006224 ORTHO05D007691 6.0e-107 391.7 368 56.5
Thecc.09G114600 Theobroma cacao HOM05D006224 ORTHO05D007691 6.0e-107 391.7 323 60.1
FvH4_1g05360 Fragaria vesca HOM05D006224 ORTHO05D007691 1.0e-106 391.0 372 56.7
MELO3C025318.2 Cucumis melo HOM05D006224 ORTHO05D007691 1.3e-106 390.6 323 59.4
FAN23G1546 Fragaria x ananassa HOM05D006224 ORTHO05D007691 1.7e-106 390.2 372 56.7
Lsat_1_v5_gn_8_94740 Lactuca sativa HOM05D006224 ORTHO05D007691 1.7e-106 390.2 331 59.2
TWI34G1467 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 2.3e-106 389.8 388 53.4
ClCG00G002210 Citrullus lanatus HOM05D006224 ORTHO05D007691 3.0e-106 389.4 317 60.6
ClCG06G010410 Citrullus lanatus HOM05D006224 ORTHO05D007691 3.0e-106 389.4 317 60.6
Ciclev10008605m.g Citrus clementina HOM05D006224 ORTHO05D007691 3.0e-106 389.4 322 60.2
Thhalv10013889m.g Eutrema salsugineum HOM05D006224 ORTHO05D007691 3.0e-106 389.4 335 59.7
CiPaw.03G235000 Carya illinoinensis HOM05D006224 ORTHO05D007691 5.1e-106 388.7 321 60.7
Psat1g037920 Pisum sativum HOM05D006224 ORTHO05D007691 5.1e-106 388.7 300 65.7
Rhsim03G0244800 Rhododendron simsii HOM05D006224 ORTHO05D007691 6.6e-106 388.3 419 52.0
Sed0009228 Sechium edule HOM05D006224 ORTHO05D007691 6.6e-106 388.3 362 55.2
Aa31LG11G5060 Aethionema arabicum HOM05D006224 ORTHO05D007691 2.5e-105 386.3 335 57.3
Peaxi162Scf00560g00629 Petunia axillaris HOM05D006224 ORTHO05D007691 4.3e-105 385.6 366 58.2
Ca_25513_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 5.6e-105 385.2 284 66.5
ClCG06G010400 Citrullus lanatus HOM05D006224 ORTHO05D007691 7.3e-105 384.8 323 59.4
AUR62011028 Chenopodium quinoa HOM05D006224 ORTHO05D007691 1.3e-104 384.0 376 55.3
Aqoxy5G03788 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 2.8e-104 382.9 327 59.9
PSO782G3139 Papaver somniferum HOM05D006224 ORTHO05D007691 2.8e-104 382.9 336 57.1
ATR0037G051 Amborella trichopoda HOM05D006224 ORTHO05D007691 3.6e-104 382.5 329 58.1
FAN26G2363 Fragaria x ananassa HOM05D006224 ORTHO05D007691 8.1e-104 381.3 372 56.2
CsaV3_1G030820 Cucumis sativus L. HOM05D006224 ORTHO05D007691 1.8e-103 380.2 333 58.6
Duzib187G0885 Durio zibethinus HOM05D006224 ORTHO05D007691 2.4e-103 379.8 332 58.7
AT5G19460 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 3.1e-103 379.4 369 55.8
CDE04G0176 Ceratophyllum demersum HOM05D006224 ORTHO05D007691 3.1e-103 379.4 327 58.7
PSO063G0773 Papaver somniferum HOM05D006224 ORTHO05D007691 2.6e-102 376.3 374 52.9
PGR042G0994 Punica granatum HOM05D006224 ORTHO05D007691 4.5e-102 375.6 411 52.1
BolC9t58538H Brassica oleracea HOM05D006224 ORTHO05D007691 5.8e-102 375.2 352 57.4
Carub.0006s1780 Capsella rubella HOM05D006224 ORTHO05D007691 7.6e-102 374.8 335 57.6
AT5G19470 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 9.9e-102 374.4 372 54.3
MBI06_g04550_MAGBIO Magnolia biondii HOM05D006224 ORTHO05D007691 1.7e-101 373.6 408 51.7
Sc08g0007140 Simmondsia chinensis HOM05D006224 ORTHO05D007691 2.9e-101 372.9 346 56.9
AL6G30950 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 2.4e-100 369.8 352 56.2
Zm00001eb309830 Zea mays HOM05D006224 ORTHO05D007691 3.2e-100 369.4 354 57.3
AL6G30960 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 1.6e-99 367.1 366 54.9
FAN28G2414 Fragaria x ananassa HOM05D006224 ORTHO05D007691 6.0e-99 365.2 350 56.3
EL10Ac8g18541 Beta vulgaris HOM05D006224 ORTHO05D007691 2.3e-98 363.2 326 58.0
ClCG00G002580 Citrullus lanatus HOM05D006224 ORTHO05D007691 2.3e-98 363.2 308 59.1
THA.LOC104799742 Tarenaya hassleriana HOM05D006224 ORTHO05D007691 2.3e-98 363.2 283 61.5
HPP92_009101 Vanilla planifolia HOM05D006224 ORTHO05D007691 2.3e-98 363.2 325 56.3
Sp6g24950 Schrenkiella parvula HOM05D006224 ORTHO05D007691 6.7e-98 361.7 381 54.3
Sabra06G0124600 Salix brachista HOM05D006224 ORTHO05D007691 1.5e-97 360.5 318 57.2
CAN.G929.19 Capsicum annuum HOM05D006224 ORTHO05D007691 2.5e-97 359.8 280 63.9
ECA236G3755 Erigeron canadensis HOM05D006224 ORTHO05D007691 1.3e-96 357.5 288 61.5
Oeu060631.1 Olea europaea HOM05D006224 ORTHO05D007691 1.6e-96 357.1 356 56.5
CSS0033373 Camellia sinensis var. sinensis HOM05D006224 ORTHO05D007691 3.7e-96 355.9 341 56.0
TPR.G31453 Trifolium pratense HOM05D006224 ORTHO05D007691 1.4e-95 354.0 337 55.2
Aqoxy5G03790 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 4.0e-95 352.4 322 56.2
C09p56840 Brassica napus HOM05D006224 ORTHO05D007691 1.1e-92 344.4 382 52.9
FAN26G3318 Fragaria x ananassa HOM05D006224 ORTHO05D007691 3.2e-92 342.8 401 50.1
TPR.G31456 Trifolium pratense HOM05D006224 ORTHO05D007691 1.8e-90 337.0 317 56.2
A10p20240 Brassica napus HOM05D006224 ORTHO05D007691 8.7e-90 334.7 337 54.3
Pp3c12_9090 Physcomitrium patens HOM05D006224 ORTHO05D007691 1.1e-84 317.8 304 53.9
Mapoly0084s0007 Marchantia polymorpha HOM05D006224 ORTHO05D007691 3.2e-84 316.2 312 50.0
Potri.006G157800 Populus trichocarpa HOM05D006224 ORTHO05D007691 6.1e-83 312.0 324 50.3
SMO347G0504 Selaginella moellendorffii HOM05D006224 ORTHO05D007691 6.7e-82 308.5 297 53.2
Nn8g39262 Nelumbo nucifera HOM05D006224 ORTHO05D007691 2.2e-80 303.5 382 46.9
Peaxi162Scf00560g00615 Petunia axillaris HOM05D006224 ORTHO05D007691 3.4e-78 296.2 284 54.6
BraA10t44095Z Brassica rapa HOM05D006224 ORTHO05D007691 2.9e-77 293.1 311 52.4
Lj7A644T17 Lonicera japonica HOM05D006224 ORTHO05D007691 1.8e-71 273.9 372 44.9
Cre13.g582201 Chlamydomonas reinhardtii HOM05D006224 ORTHO05D007691 5.3e-71 272.3 302 46.4
HanXRQChr05g0139161 Helianthus annuus HOM05D006224 ORTHO05D007691 9.4e-68 261.5 342 45.6
MCO11G748 Micromonas commoda HOM05D006224 ORTHO05D007691 1.3e-64 251.1 291 45.7
Prupe.7G186600 Prunus persica HOM05D006224 ORTHO05D007691 3.7e-64 249.6 231 59.3
unitig_748.g7154 Utricularia gibba HOM05D006224 ORTHO05D007691 1.1e-63 248.1 270 54.4
AagrBONN_evm.TU.Sc2ySwM_228.2202 Anthoceros agrestis HOM05D006224 ORTHO05D007691 5.9e-62 242.3 222 55.4
PRCOL_00004258 Prasinoderma coloniale HOM05D006224 ORTHO05D007691 1.8e-58 230.7 297 43.1
Pp3c6_16000 Physcomitrium patens HOM05D006224 ORTHO05D007691 1.7e-56 224.2 303 42.6
Pp3c3_27400 Physcomitrium patens HOM05D006224 ORTHO05D007691 1.4e-55 221.1 301 39.2
AUR62033400 Chenopodium quinoa HOM05D006224 ORTHO05D007691 1.7e-48 197.6 231 48.1
CARHR193460 Cardamine hirsuta HOM05D006224 ORTHO05D007691 5.4e-47 192.6 129 66.7
unitig_748.g7155 Utricularia gibba HOM05D006224 ORTHO05D007691 2.4e-31 140.6 86 72.1
Ah.09g227190 Amaranthus hybridus HOM05D006224 ORTHO05D007691 1.0e-29 135.2 90 66.7
Cfa025487 Carpinus fangiana HOM05D006224 ORTHO05D007691 1.3e-29 134.8 212 36.8
Os09g0322200 Oryza sativa ssp. japonica HOM05D006224 ORTHO05D007691 1.3e-24 118.2 150 46.0
SEGI_32758 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 6.6e-21 105.9 72 66.7
MSTRG.26438 Avicennia marina HOM05D006224 ORTHO05D007691 2.2e-08 64.3 101 42.6
vmacro11393 Vaccinium macrocarpon HOM05D003441 ORTHO05D004516 2.4e-07 60.8 42 57.1
SEGI_12041 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 1.6e-06 58.2 70 47.1


User provided reference genes

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