Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold23G10049 Striga asiatica HOM05D006355 ORTHO05D008284 1.8e-122 442.6 221 100.0
SGA_v2.0_scaffold21G09447 Striga asiatica HOM05D006355 ORTHO05D008284 9.1e-50 201.1 340 40.3
Migut.L01533 Erythranthe guttata HOM05D006355 ORTHO05D008284 5.4e-42 175.3 345 37.1
Peaxi162Scf00494g00027 Petunia axillaris HOM05D006355 ORTHO05D008284 1.7e-40 170.2 348 36.5
Oeu010827.1 Olea europaea HOM05D006355 ORTHO05D008284 6.6e-40 168.3 330 37.3
SalBow1G0189 Salvia bowleyana HOM05D006355 ORTHO05D008284 7.3e-39 164.9 359 35.1
GSVIVG01015151001 Vitis vinifera HOM05D006355 ORTHO05D008284 1.2e-36 157.5 315 36.5
Nitab4.5_0002079g0060 Nicotiana tabacum HOM05D006355 ORTHO05D008284 2.6e-36 156.4 344 34.9
HanXRQChr12g0354551 Helianthus annuus HOM05D006355 ORTHO05D008284 7.5e-36 154.8 316 35.1
Solyc07g041020.3 Solanum lycopersicum HOM05D006355 ORTHO05D008284 1.3e-35 154.1 342 34.5
Sopen07g020150 Solanum pennellii HOM05D006355 ORTHO05D008284 1.7e-35 153.7 339 34.5
PGSC0003DMG400014101 Solanum tuberosum HOM05D006355 ORTHO05D008284 2.2e-35 153.3 339 35.4
Aqoxy7G01135 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 3.7e-35 152.5 350 33.7
CAN.G35.5 Capsicum annuum HOM05D006355 ORTHO05D008284 6.4e-35 151.8 343 34.1
Lsat_1_v5_gn_5_143521 Lactuca sativa HOM05D006355 ORTHO05D008284 1.1e-34 151.0 301 36.2
ECA234G3558 Erigeron canadensis HOM05D006355 ORTHO05D008284 1.8e-34 150.2 324 34.3
CARHR109830 Cardamine hirsuta HOM05D006355 ORTHO05D008284 7.0e-34 148.3 314 35.7
Lj4A288G20 Lonicera japonica HOM05D006355 ORTHO05D008284 2.7e-33 146.4 360 33.6
Cpa.g.sc28.115 Carica papaya HOM05D006355 ORTHO05D008284 3.5e-33 146.0 361 31.9
Eucgr.C00847 Eucalyptus grandis HOM05D006355 ORTHO05D008284 7.8e-33 144.8 359 32.9
Carub.0003s3364 Capsella rubella HOM05D006355 ORTHO05D008284 1.3e-32 144.1 318 34.3
BcaB03g16724 Brassica carinata HOM05D006355 ORTHO05D008284 2.3e-32 143.3 307 35.5
DCAR_024718 Daucus carota HOM05D006355 ORTHO05D008284 5.0e-32 142.1 348 33.3
Atru.chr7.1648 Acer truncatum HOM05D006355 ORTHO05D008284 6.6e-32 141.7 361 31.3
arahy.Tifrunner.gnm1.ann1.I94R61 Arachis hypogaea HOM05D006355 ORTHO05D008284 6.6e-32 141.7 336 33.6
Ciclev10008972m.g Citrus clementina HOM05D006355 ORTHO05D008284 6.6e-32 141.7 345 31.9
Rhsim05G0014000 Rhododendron simsii HOM05D006355 ORTHO05D008284 6.6e-32 141.7 365 31.2
Hma1.2p1_0672F.1_g200900 Hydrangea macrophylla HOM05D006355 ORTHO05D008284 2.5e-31 139.8 355 31.3
Glyma.17G052200 Glycine max HOM05D006355 ORTHO05D008284 5.6e-31 138.7 339 32.4
Zm00001eb357030 Zea mays HOM05D006355 ORTHO05D008284 5.6e-31 138.7 329 33.1
Lalb_Chr12g0199961 Lupinus albus HOM05D006355 ORTHO05D008284 1.2e-30 137.5 332 33.4
Nitab4.5_0002842g0040 Nicotiana tabacum HOM05D006355 ORTHO05D008284 1.6e-30 137.1 353 32.0
Potri.006G146200 Populus trichocarpa HOM05D006355 ORTHO05D008284 1.6e-30 137.1 358 32.1
Cfa003044 Carpinus fangiana HOM05D006355 ORTHO05D008284 2.1e-30 136.7 344 31.4
Thhalv10022802m.g Eutrema salsugineum HOM05D006355 ORTHO05D008284 2.1e-30 136.7 312 34.0
Sp3g32760 Schrenkiella parvula HOM05D006355 ORTHO05D008284 2.1e-30 136.7 312 35.3
Lj4g0004716 Lotus japonicus HOM05D006355 ORTHO05D008284 2.8e-30 136.3 349 31.8
TWI34G0237 Tripterygium wilfordii HOM05D006355 ORTHO05D008284 2.8e-30 136.3 335 31.3
QL02p061794 Quercus lobata HOM05D006355 ORTHO05D008284 3.6e-30 136.0 355 30.4
Cc06_g11800 Coffea canephora HOM05D006355 ORTHO05D008284 4.7e-30 135.6 364 31.9
AT2G19385 Arabidopsis thaliana HOM05D006355 ORTHO05D008284 8.0e-30 134.8 312 33.7
Haze_25952 Corylus avellana HOM05D006355 ORTHO05D008284 8.0e-30 134.8 351 31.1
QL02p061767 Quercus lobata HOM05D006355 ORTHO05D008284 8.0e-30 134.8 355 30.1
arahy.Tifrunner.gnm1.ann1.2VE13Z Arachis hypogaea HOM05D006355 ORTHO05D008284 3.1e-29 132.9 336 31.8
vmacro17166 Vaccinium macrocarpon HOM05D006355 ORTHO05D008284 5.2e-29 132.1 332 32.2
Glyma.13G107200 Glycine max HOM05D006355 ORTHO05D008284 8.9e-29 131.3 342 30.1
BraA07t27933Z Brassica rapa HOM05D006355 ORTHO05D008284 1.2e-28 131.0 300 35.7
Ca_21303_v3 Cicer arietinum L. HOM05D006355 ORTHO05D008284 1.2e-28 131.0 348 30.7
Phvul.003G133900 Phaseolus vulgaris HOM05D006355 ORTHO05D008284 1.2e-28 131.0 350 31.4
Thecc.09G082800 Theobroma cacao HOM05D006355 ORTHO05D008284 1.2e-28 131.0 364 30.5
Gohir.A07G013400 Gossypium hirsutum HOM05D006355 ORTHO05D008284 1.5e-28 130.6 356 29.8
ClCG11G001610 Citrullus lanatus HOM05D006355 ORTHO05D008284 2.6e-28 129.8 349 29.8
Nn8g38760 Nelumbo nucifera HOM05D006355 ORTHO05D008284 2.6e-28 129.8 358 29.9
Nn8g41302 Nelumbo nucifera HOM05D006355 ORTHO05D008284 2.6e-28 129.8 358 29.9
Gohir.D07G013200 Gossypium hirsutum HOM05D006355 ORTHO05D008284 3.4e-28 129.4 356 29.5
Gorai.001G013900 Gossypium raimondii HOM05D006355 ORTHO05D008284 3.4e-28 129.4 356 29.5
PGR142G1993 Punica granatum HOM05D006355 ORTHO05D008284 3.4e-28 129.4 316 32.6
Manes.16G098900 Manihot esculenta HOM05D006355 ORTHO05D008284 4.4e-28 129.0 359 30.4
Sed0027351 Sechium edule HOM05D006355 ORTHO05D008284 4.4e-28 129.0 344 31.1
CiPaw.03G211000 Carya illinoinensis HOM05D006355 ORTHO05D008284 5.8e-28 128.6 358 29.6
TPR.G9437 Trifolium pratense HOM05D006355 ORTHO05D008284 5.8e-28 128.6 330 31.2
Os01g0583200 Oryza sativa ssp. japonica HOM05D006355 ORTHO05D008284 9.8e-28 127.9 340 30.9
A07p01380 Brassica napus HOM05D006355 ORTHO05D008284 1.3e-27 127.5 309 34.0
Prupe.7G204300 Prunus persica HOM05D006355 ORTHO05D008284 2.2e-27 126.7 337 30.3
C07p02840 Brassica napus HOM05D006355 ORTHO05D008284 3.7e-27 125.9 306 34.0
BolC7t40681H Brassica oleracea HOM05D006355 ORTHO05D008284 3.7e-27 125.9 306 34.0
AUR62025162 Chenopodium quinoa HOM05D006355 ORTHO05D008284 3.7e-27 125.9 351 31.6
Sc08g0008680 Simmondsia chinensis HOM05D006355 ORTHO05D008284 3.7e-27 125.9 360 30.6
EL10Ac8g19156 Beta vulgaris HOM05D006355 ORTHO05D008284 4.9e-27 125.6 124 52.4
MELO3C004639.2 Cucumis melo HOM05D006355 ORTHO05D008284 6.4e-27 125.2 348 29.9
CsaV3_2G001300 Cucumis sativus L. HOM05D006355 ORTHO05D008284 6.4e-27 125.2 348 29.9
CANSAT56G1278 Cannabis sativa HOM05D006355 ORTHO05D008284 8.3e-27 124.8 347 30.8
CANSAT56G3969 Cannabis sativa HOM05D006355 ORTHO05D008284 8.3e-27 124.8 347 30.8
Hund08706 Selenicereus undatus HOM05D006355 ORTHO05D008284 1.1e-26 124.4 361 30.7
Actinidia25231 Actinidia chinensis HOM05D006355 ORTHO05D008284 2.4e-26 123.2 118 54.2
BcaC06g36568 Brassica carinata HOM05D006355 ORTHO05D008284 3.2e-26 122.9 309 33.7
Medtr4g125720 Medicago truncatula HOM05D006355 ORTHO05D008284 3.2e-26 122.9 330 31.5
Dinv36798 Davidia involucrata HOM05D006355 ORTHO05D008284 1.0e-24 117.9 118 50.8
TAR413G0001 Trochodendron aralioides HOM05D006355 ORTHO05D008284 1.0e-24 117.9 363 29.2
ATR0051G027 Amborella trichopoda HOM05D006355 ORTHO05D008284 2.3e-24 116.7 352 29.3
Psat4g016280 Pisum sativum HOM05D006355 ORTHO05D008284 3.0e-24 116.3 118 52.5
AUR62029015 Chenopodium quinoa HOM05D006355 ORTHO05D008284 3.9e-24 115.9 118 52.5
COL.COLO4_18155 Corchorus olitorius HOM05D006355 ORTHO05D008284 3.9e-24 115.9 364 28.6
Duzib168G2189 Durio zibethinus HOM05D006355 ORTHO05D008284 5.0e-24 115.5 187 39.6
Sabra06G0115400 Salix brachista HOM05D006355 ORTHO05D008284 1.1e-23 114.4 116 50.9
MBI11_g07532_MAGBIO Magnolia biondii HOM05D006355 ORTHO05D008284 1.9e-23 113.6 358 27.7
CDE06G0893 Ceratophyllum demersum HOM05D006355 ORTHO05D008284 2.8e-22 109.8 350 29.4
FAN26G1509 Fragaria x ananassa HOM05D006355 ORTHO05D008284 3.6e-22 109.4 118 48.3
FAN26G2768 Fragaria x ananassa HOM05D006355 ORTHO05D008284 3.6e-22 109.4 118 48.3
unitig_8.g3528 Utricularia gibba HOM05D001583 ORTHO05D001900 3.6e-22 109.4 244 34.4
RcHm_v2.0_Chr2g0094111 Rosa chinensis HOM05D006355 ORTHO05D008284 6.2e-22 108.6 118 48.3
PSO063G0296 Papaver somniferum HOM05D006355 ORTHO05D008284 1.1e-21 107.8 118 48.3
PSO832G0549 Papaver somniferum HOM05D006355 ORTHO05D008284 1.8e-21 107.1 118 47.5
Aa31LG8G16390 Aethionema arabicum HOM05D006355 ORTHO05D008284 4.0e-21 105.9 321 28.7
FvH4_1g08060 Fragaria vesca HOM05D006355 ORTHO05D008284 4.0e-21 105.9 118 48.3
FAN19G0491 Fragaria x ananassa HOM05D006355 ORTHO05D008284 4.0e-21 105.9 118 48.3
FAN23G1962 Fragaria x ananassa HOM05D006355 ORTHO05D008284 8.9e-21 104.8 118 47.5
MD15G1212400 Malus domestica HOM05D006355 ORTHO05D008284 1.2e-20 104.4 346 29.5
FAN28G1606 Fragaria x ananassa HOM05D006355 ORTHO05D008284 1.5e-20 104.0 118 47.5
Mapoly0108s0017 Marchantia polymorpha HOM05D006355 ORTHO05D008284 1.5e-20 104.0 119 47.9
MD02G1085300 Malus domestica HOM05D006355 ORTHO05D008284 2.0e-20 103.6 344 28.5
AL3G48940 Arabidopsis lyrata HOM05D006355 ORTHO05D008284 6.4e-19 98.6 203 34.5
HPP92_009733 Vanilla planifolia HOM05D006355 ORTHO05D008284 1.6e-17 94.0 353 26.3
SEGI_15381 Sequoiadendron giganteum HOM05D006355 ORTHO05D008284 7.8e-17 91.7 179 31.3
CBR_g39727 Chara braunii HOM05D006355 ORTHO05D008284 2.3e-16 90.1 159 39.0
CSS0037261 Camellia sinensis var. sinensis HOM05D006355 ORTHO05D008284 3.9e-16 89.4 121 46.3
AagrBONN_evm.TU.Sc2ySwM_228.3887 Anthoceros agrestis HOM05D006355 ORTHO05D008284 5.1e-16 89.0 121 45.5
Gohir.A05G032100 Gossypium hirsutum HOM05D006355 ORTHO05D008284 1.9e-15 87.0 118 41.5
VMungo1215G0260 Vigna mungo HOM05D006355 ORTHO05D008284 7.3e-15 85.1 281 28.5
Pp3c3_280 Physcomitrium patens HOM05D006355 ORTHO05D008284 6.2e-14 82.0 122 41.0
SMO200G0211 Selaginella moellendorffii HOM05D006355 ORTHO05D008284 1.2e-12 77.8 120 40.8
AL3G48950 Arabidopsis lyrata HOM05D006355 ORTHO05D008284 1.7e-11 73.9 118 37.3
Carub.0003s3362 Capsella rubella HOM05D006355 ORTHO05D008284 7.1e-10 68.6 118 38.1
Migut.B00896 Erythranthe guttata HOM05D002142 ORTHO05D001189 7.8e-09 65.1 53 58.5
SHI30664 Sapria himalayana HOM05D006355 ORTHO05D008284 1.7e-08 63.9 88 43.2
AT2G19380 Arabidopsis thaliana HOM05D006355 ORTHO05D011679 6.6e-08 62.0 160 29.4
Cre17.g701050 Chlamydomonas reinhardtii HOM05D006355 ORTHO05D008284 1.9e-07 60.5 118 34.7
SHI23456 Sapria himalayana HOM05D006355 ORTHO05D008284 2.5e-07 60.1 31 77.4
SHI30666 Sapria himalayana HOM05D006355 ORTHO05D008284 2.5e-07 60.1 31 77.4


User provided reference genes

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