Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold237G43848 Striga asiatica HOM05D002762 ORTHO05D008831 0.0e+00 1235.7 615 100.0
MSTRG.3975 Avicennia marina HOM05D002762 ORTHO05D008831 3.3e-299 1031.2 624 79.6
Migut.G00243 Erythranthe guttata HOM05D002762 ORTHO05D008831 1.2e-296 1022.7 626 79.6
Migut.G00245 Erythranthe guttata HOM05D002762 ORTHO05D008831 2.2e-295 1018.5 626 79.1
CSS0041967 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 1.6e-269 932.6 628 72.6
Cc03_g02810 Coffea canephora HOM05D002762 ORTHO05D008831 2.8e-266 921.8 632 71.8
Oeu035631.1 Olea europaea HOM05D002762 ORTHO05D008831 1.4e-265 919.5 591 76.1
QL06p006121 Quercus lobata HOM05D002762 ORTHO05D008831 2.0e-264 915.6 625 71.7
GSVIVG01017858001 Vitis vinifera HOM05D002762 ORTHO05D008831 2.6e-264 915.2 625 71.7
TAR365G0003 Trochodendron aralioides HOM05D002762 ORTHO05D008831 1.4e-262 909.4 627 71.0
Actinidia40215 Actinidia chinensis HOM05D002762 ORTHO05D008831 4.2e-262 907.9 628 70.9
Ciclev10004552m.g Citrus clementina HOM05D002762 ORTHO05D008831 9.4e-262 906.7 624 70.4
Rhsim04G0212200 Rhododendron simsii HOM05D002762 ORTHO05D008831 6.1e-261 904.0 629 71.7
CAN.G889.17 Capsicum annuum HOM05D002762 ORTHO05D008831 2.3e-260 902.1 633 70.0
Solyc01g080360.3 Solanum lycopersicum HOM05D002762 ORTHO05D008831 2.0e-259 899.0 632 70.1
TWI53G0007 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 2.6e-259 898.7 629 70.1
Sopen01g032170 Solanum pennellii HOM05D002762 ORTHO05D008831 5.7e-259 897.5 632 69.9
Thecc.04G271400 Theobroma cacao HOM05D002762 ORTHO05D008831 9.7e-259 896.7 629 69.6
CSS0031724 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 1.1e-257 893.3 607 72.3
Gohir.D09G232800 Gossypium hirsutum HOM05D002762 ORTHO05D008831 5.3e-257 891.0 629 69.2
Gorai.006G255700 Gossypium raimondii HOM05D002762 ORTHO05D008831 7.0e-257 890.6 629 69.2
Gohir.A09G231700 Gossypium hirsutum HOM05D002762 ORTHO05D008831 1.2e-256 889.8 629 69.0
DCAR_030580 Daucus carota HOM05D002762 ORTHO05D008831 4.5e-256 887.9 623 69.5
Haze_01004 Corylus avellana HOM05D002762 ORTHO05D008831 5.9e-256 887.5 673 66.0
Duzib052G0147 Durio zibethinus HOM05D002762 ORTHO05D008831 1.0e-255 886.7 629 68.8
MBI19_g15847_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D008831 1.3e-255 886.3 631 68.6
Duzib212G0752 Durio zibethinus HOM05D002762 ORTHO05D008831 3.2e-254 881.7 629 68.8
Nitab4.5_0000894g0020 Nicotiana tabacum HOM05D002762 ORTHO05D008831 7.2e-254 880.6 608 70.7
vmacro08246 Vaccinium macrocarpon HOM05D002762 ORTHO05D008831 3.6e-253 878.2 649 68.9
CANSAT78G1603 Cannabis sativa HOM05D002762 ORTHO05D008831 4.0e-252 874.8 630 67.0
RcHm_v2.0_Chr4g0419641 Rosa chinensis HOM05D002762 ORTHO05D008831 4.8e-250 867.8 633 67.6
ATR0626G043 Amborella trichopoda HOM05D002762 ORTHO05D008831 6.3e-250 867.5 637 66.1
Potri.010G028600 Populus trichocarpa HOM05D002762 ORTHO05D008831 1.8e-249 865.9 633 67.1
VMungo1215G1507 Vigna mungo HOM05D002762 ORTHO05D008831 9.1e-249 863.6 620 66.6
Phvul.003G097700 Phaseolus vulgaris HOM05D002762 ORTHO05D008831 2.0e-248 862.4 623 66.3
Lj6A665G69 Lonicera japonica HOM05D002762 ORTHO05D008831 3.5e-248 861.7 668 66.0
FvH4_4g14000 Fragaria vesca HOM05D002762 ORTHO05D008831 7.7e-248 860.5 629 66.8
MD16G1180200 Malus domestica HOM05D002762 ORTHO05D008831 1.0e-247 860.1 628 66.2
Glyma.17G019900 Glycine max HOM05D002762 ORTHO05D008831 3.8e-247 858.2 624 67.1
Ca_21567_v3 Cicer arietinum L. HOM05D002762 ORTHO05D008831 5.0e-247 857.8 619 66.9
COL.COLO4_13977 Corchorus olitorius HOM05D002762 ORTHO05D008831 6.5e-247 857.4 629 67.2
Lj4g0021299 Lotus japonicus HOM05D002762 ORTHO05D008831 6.5e-247 857.4 622 67.2
FAN12G0174 Fragaria x ananassa HOM05D002762 ORTHO05D008831 4.2e-246 854.7 629 66.3
TPR.G28123 Trifolium pratense HOM05D002762 ORTHO05D008831 7.2e-246 854.0 622 65.8
EL10Ac8g18297 Beta vulgaris HOM05D002762 ORTHO05D008831 9.4e-246 853.6 634 67.0
HanXRQChr07g0192681 Helianthus annuus HOM05D002762 ORTHO05D008831 1.6e-245 852.8 629 68.4
FAN22G0551 Fragaria x ananassa HOM05D002762 ORTHO05D008831 2.1e-245 852.4 629 66.0
Medtr4g118010 Medicago truncatula HOM05D002762 ORTHO05D008831 2.1e-245 852.4 623 65.5
Aqoxy5G00558 Aquilegia oxysepala HOM05D002762 ORTHO05D008831 2.7e-245 852.0 624 66.0
Sc19g0004720 Simmondsia chinensis HOM05D002762 ORTHO05D008831 6.1e-245 850.9 635 66.1
CsaV3_6G005500 Cucumis sativus L. HOM05D002762 ORTHO05D008831 8.0e-245 850.5 629 66.0
FAN07G1246 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.0e-244 850.1 629 66.3
ClCG06G005650 Citrullus lanatus HOM05D002762 ORTHO05D008831 1.2e-243 846.7 629 65.2
AUR62033230 Chenopodium quinoa HOM05D002762 ORTHO05D008831 3.4e-243 845.1 631 65.9
Manes.03G187600 Manihot esculenta HOM05D002762 ORTHO05D008831 5.7e-243 844.3 610 67.5
Psat4g031200 Pisum sativum HOM05D002762 ORTHO05D008831 6.3e-242 840.9 624 64.6
THA.LOC104802606 Tarenaya hassleriana HOM05D002762 ORTHO05D008831 2.4e-241 839.0 621 66.8
Lalb_Chr07g0177471 Lupinus albus HOM05D002762 ORTHO05D008831 3.1e-241 838.6 626 64.9
Nn4g26133 Nelumbo nucifera HOM05D002762 ORTHO05D008831 5.9e-240 834.3 600 66.8
arahy.Tifrunner.gnm1.ann1.08LYWQ Arachis hypogaea HOM05D002762 ORTHO05D008831 2.3e-239 832.4 622 66.2
CiPaw.01G157200 Carya illinoinensis HOM05D002762 ORTHO05D008831 2.9e-239 832.0 575 69.2
Lsat_1_v5_gn_6_14820 Lactuca sativa HOM05D002762 ORTHO05D008831 1.9e-238 829.3 636 64.6
Peaxi162Scf00095g00610 Petunia axillaris HOM05D002762 ORTHO05D008831 9.5e-238 827.0 585 70.3
Sabra10G0012300 Salix brachista HOM05D002762 ORTHO05D008831 2.1e-237 825.9 645 63.4
Nitab4.5_0000059g0110 Nicotiana tabacum HOM05D002762 ORTHO05D008831 9.8e-235 817.0 573 69.3
Hund09035 Selenicereus undatus HOM05D002762 ORTHO05D008831 1.3e-234 816.6 628 64.6
ECA233G1162 Erigeron canadensis HOM05D002762 ORTHO05D008831 3.7e-234 815.1 622 65.1
Eucgr.F00974 Eucalyptus grandis HOM05D002762 ORTHO05D008831 3.7e-234 815.1 597 68.2
AT2G20790 Arabidopsis thaliana HOM05D002762 ORTHO05D008831 6.3e-234 814.3 614 63.8
CARHR111460 Cardamine hirsuta HOM05D002762 ORTHO05D008831 1.4e-233 813.1 617 64.7
PSO210G2175 Papaver somniferum HOM05D002762 ORTHO05D008831 7.0e-233 810.8 627 63.0
AL3G53900 Arabidopsis lyrata HOM05D002762 ORTHO05D008831 1.2e-232 810.1 617 63.4
unitig_899.g14405 Utricularia gibba HOM05D002762 ORTHO05D008831 1.6e-232 809.7 598 67.1
arahy.Tifrunner.gnm1.ann1.ZAIR7G Arachis hypogaea HOM05D002762 ORTHO05D008831 3.3e-230 802.0 612 65.7
PSO832G0886 Papaver somniferum HOM05D002762 ORTHO05D008831 7.3e-230 800.8 627 62.5
C03p09290 Brassica napus HOM05D002762 ORTHO05D008831 1.6e-229 799.7 617 63.5
BolC3t13425H Brassica oleracea HOM05D002762 ORTHO05D008831 4.7e-229 798.1 617 63.7
Aa31LG8G17700 Aethionema arabicum HOM05D002762 ORTHO05D008831 2.0e-227 792.7 630 62.4
Sp6g27240 Schrenkiella parvula HOM05D002762 ORTHO05D008831 2.0e-227 792.7 626 63.3
Sed0011257 Sechium edule HOM05D002762 ORTHO05D008831 2.2e-226 789.3 631 62.0
A03p08030 Brassica napus HOM05D002762 ORTHO05D008831 1.1e-225 786.9 619 63.2
BraA03t10129Z Brassica rapa HOM05D002762 ORTHO05D008831 1.1e-225 786.9 619 63.2
HPP92_018399 Vanilla planifolia HOM05D002762 ORTHO05D008831 1.4e-225 786.6 629 62.2
AUR62021313 Chenopodium quinoa HOM05D002762 ORTHO05D008831 2.4e-225 785.8 591 65.0
CDE11G0719 Ceratophyllum demersum HOM05D002762 ORTHO05D008831 1.3e-223 780.0 628 63.1
Thhalv10003762m.g Eutrema salsugineum HOM05D002762 ORTHO05D008831 1.5e-222 776.5 619 61.6
Sed0022901 Sechium edule HOM05D002762 ORTHO05D008831 1.9e-214 749.6 629 59.9
Carub.0003s3536 Capsella rubella HOM05D002762 ORTHO05D008831 1.8e-212 743.0 556 64.6
Zm00001eb410820 Zea mays HOM05D002762 ORTHO05D008831 2.8e-205 719.2 629 56.6
Prupe.1G147800 Prunus persica HOM05D002762 ORTHO05D008831 1.3e-202 710.3 628 57.0
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 1.2e-195 687.2 439 75.6
SMO115G0172 Selaginella moellendorffii HOM05D002762 ORTHO05D008831 1.0e-183 647.5 620 51.9
Mapoly0055s0097 Marchantia polymorpha HOM05D002762 ORTHO05D008831 5.5e-177 625.2 633 50.4
SEGI_30175 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 1.3e-175 620.5 486 61.9
MELO3C021387.2 Cucumis melo HOM05D002762 ORTHO05D008831 1.8e-175 620.2 453 66.2
Ah.09g229990 Amaranthus hybridus HOM05D002762 ORTHO05D008831 5.8e-171 605.1 452 66.6
Cfa015544 Carpinus fangiana HOM05D002762 ORTHO05D008831 5.5e-161 572.0 399 69.9
Nn1g08335 Nelumbo nucifera HOM05D002762 ORTHO05D008831 5.5e-161 572.0 417 65.9
Pp3c2_12250 Physcomitrium patens HOM05D002762 ORTHO05D008831 1.0e-151 541.2 622 46.3
AagrBONN_evm.TU.Sc2ySwM_368.1411 Anthoceros agrestis HOM05D002762 ORTHO05D008831 1.7e-149 533.9 598 46.8
SEGI_25743 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 2.9e-138 496.5 400 61.5
Eucgr.B01191 Eucalyptus grandis HOM05D002762 ORTHO05D008831 2.7e-136 490.0 419 61.6
MD13G1179200 Malus domestica HOM05D002762 ORTHO05D008831 2.3e-114 417.2 422 55.2
Cpa.g.sc16.61 Carica papaya HOM05D002762 ORTHO05D008831 1.6e-112 411.0 609 40.2
CBR_g19730 Chara braunii HOM05D002762 ORTHO05D008831 2.0e-110 404.1 774 34.5
Actinidia23461 Actinidia chinensis HOM05D002762 ORTHO05D008831 1.7e-98 364.4 269 68.0
BcaB01g05249 Brassica carinata HOM05D002762 ORTHO05D008831 1.3e-53 215.3 179 57.5
Os12g0528300 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D008831 1.3e-48 198.7 166 56.0
SEGI_28752 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 8.5e-37 159.5 154 51.3
MD12G1098800 Malus domestica HOM05D002762 ORTHO05D008831 1.1e-36 159.1 214 40.2
MD12G1098700 Malus domestica HOM05D002762 ORTHO05D008831 2.6e-33 147.9 164 51.8
Actinidia23460 Actinidia chinensis HOM05D002762 ORTHO05D030920 2.0e-30 138.3 78 80.8
VMungo1215G0498 Vigna mungo HOM05D002762 ORTHO05D008831 2.0e-17 95.1 86 59.3
COL.COLO4_28661 Corchorus olitorius HOM05D002762 ORTHO05D008831 3.1e-15 87.8 89 50.6
FAN17G1900 Fragaria x ananassa HOM05D002762 ORTHO05D030920 5.9e-14 83.6 54 72.2
TWI09G1537 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 2.6e-09 68.2 40 72.5
Glyma.07G254400 Glycine max HOM05D002762 ORTHO05D004643 6.3e-08 63.5 47 59.6
SMO165G0130 Selaginella moellendorffii HOM05D000740 ORTHO05D007141 7.0e-07 60.1 237 26.6
MD13G1179000 Malus domestica HOM05D002762 ORTHO05D030920 9.1e-07 59.7 35 77.1


User provided reference genes

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