Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold232G43514 Striga asiatica HOM05D005955 ORTHO05D007633 1.2e-146 523.1 254 100.0
MSTRG.5061 Avicennia marina HOM05D005955 ORTHO05D007633 2.8e-119 432.2 250 84.0
Migut.O00720 Erythranthe guttata HOM05D005955 ORTHO05D007633 1.1e-115 420.2 248 85.5
Migut.N01830 Erythranthe guttata HOM05D005955 ORTHO05D007633 3.2e-115 418.7 248 85.1
unitig_8.g4774 Utricularia gibba HOM05D005955 ORTHO05D007633 1.5e-112 409.8 229 85.6
Dinv09262 Davidia involucrata HOM05D005955 ORTHO05D007633 2.2e-108 396.0 246 78.0
Sopen11g001560 Solanum pennellii HOM05D005955 ORTHO05D007633 2.1e-106 389.4 244 77.9
Nitab4.5_0001681g0050 Nicotiana tabacum HOM05D005955 ORTHO05D007633 7.9e-106 387.5 242 78.9
CSS0025918 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 1.8e-105 386.3 249 76.7
Peaxi162Scf01732g00026 Petunia axillaris HOM05D005955 ORTHO05D007633 3.9e-105 385.2 228 82.9
Solyc11g005590.1 Solanum lycopersicum HOM05D005955 ORTHO05D007633 3.9e-105 385.2 228 80.7
PGSC0003DMG401003979 Solanum tuberosum HOM05D005955 ORTHO05D007633 6.7e-105 384.4 244 77.0
Rhsim01G0123700 Rhododendron simsii HOM05D005955 ORTHO05D007633 8.7e-105 384.0 247 75.7
GSVIVG01000659001 Vitis vinifera HOM05D005955 ORTHO05D007633 1.9e-104 382.9 255 74.9
vmacro12691 Vaccinium macrocarpon HOM05D005955 ORTHO05D007633 1.6e-103 379.8 232 80.2
Actinidia02255 Actinidia chinensis HOM05D005955 ORTHO05D007633 3.7e-103 378.6 248 76.6
Hma1.2p1_1251F.1_g270440 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 8.2e-103 377.5 245 76.7
QL04p014297 Quercus lobata HOM05D005955 ORTHO05D007633 1.1e-102 377.1 252 73.8
CiPaw.13G012200 Carya illinoinensis HOM05D005955 ORTHO05D007633 5.3e-102 374.8 231 78.8
Manes.11G004000 Manihot esculenta HOM05D005955 ORTHO05D007633 1.5e-101 373.2 250 74.0
Phvul.005G029600 Phaseolus vulgaris HOM05D005955 ORTHO05D007633 4.5e-101 371.7 239 74.9
Cc02_g29700 Coffea canephora HOM05D005955 ORTHO05D007633 5.9e-101 371.3 255 72.5
TWI63G0596 Tripterygium wilfordii HOM05D005955 ORTHO05D007633 2.2e-100 369.4 254 71.7
Ciclev10005678m.g Citrus clementina HOM05D005955 ORTHO05D007633 2.9e-100 369.0 252 72.6
Oeu015683.2 Olea europaea HOM05D005955 ORTHO05D007633 2.9e-100 369.0 211 86.7
arahy.Tifrunner.gnm1.ann1.RGX0XE Arachis hypogaea HOM05D005955 ORTHO05D007633 3.8e-100 368.6 232 77.2
Ca_27127_v3 Cicer arietinum L. HOM05D005955 ORTHO05D007633 5.0e-100 368.2 245 74.7
Atru.chr12.1378 Acer truncatum HOM05D005955 ORTHO05D007633 6.5e-100 367.9 257 71.2
Glyma.11G154400 Glycine max HOM05D005955 ORTHO05D007633 8.5e-100 367.5 230 77.8
Haze_03068 Corylus avellana HOM05D005955 ORTHO05D007633 1.1e-99 367.1 245 75.5
VMungo1080G1708 Vigna mungo HOM05D005955 ORTHO05D007633 1.9e-99 366.3 230 77.4
TAR369G0753 Trochodendron aralioides HOM05D005955 ORTHO05D007633 2.5e-99 365.9 254 73.2
FvH4_7g02750 Fragaria vesca HOM05D005955 ORTHO05D007633 1.6e-98 363.2 231 77.1
FAN06G1602 Fragaria x ananassa HOM05D005955 ORTHO05D007633 1.6e-98 363.2 231 77.1
MD02G1290300 Malus domestica HOM05D005955 ORTHO05D007633 1.6e-98 363.2 244 73.4
THA.LOC104824190 Tarenaya hassleriana HOM05D005955 ORTHO05D007633 1.6e-98 363.2 264 69.3
Medtr3g017610 Medicago truncatula HOM05D005955 ORTHO05D007633 2.1e-98 362.8 242 73.1
FAN10G0293 Fragaria x ananassa HOM05D005955 ORTHO05D007633 3.6e-98 362.1 231 76.6
MBI13_g36285_MAGBIO Magnolia biondii HOM05D005955 ORTHO05D007633 6.1e-98 361.3 231 74.9
Nitab4.5_0000320g0120 Nicotiana tabacum HOM05D005955 ORTHO05D007633 7.9e-98 360.9 310 61.9
Eucgr.G03245 Eucalyptus grandis HOM05D005955 ORTHO05D007633 1.4e-97 360.1 250 72.4
Gohir.D04G014500 Gossypium hirsutum HOM05D005955 ORTHO05D007633 1.4e-97 360.1 255 72.5
Psat5g219280 Pisum sativum HOM05D005955 ORTHO05D007633 1.4e-97 360.1 244 72.5
Thecc.10G166400 Theobroma cacao HOM05D005955 ORTHO05D007633 2.3e-97 359.4 259 70.3
FAN03G1179 Fragaria x ananassa HOM05D005955 ORTHO05D007633 3.0e-97 359.0 231 75.8
Duzib128G0282 Durio zibethinus HOM05D005955 ORTHO05D007633 5.1e-97 358.2 255 71.4
Potri.001G025601 Populus trichocarpa HOM05D005955 ORTHO05D007633 5.1e-97 358.2 254 70.1
EL10Ac2g02824 Beta vulgaris HOM05D005955 ORTHO05D007633 8.8e-97 357.5 249 70.7
Lalb_Chr04g0264041 Lupinus albus HOM05D005955 ORTHO05D007633 8.8e-97 357.5 240 73.8
Prupe.2G032200 Prunus persica HOM05D005955 ORTHO05D007633 8.8e-97 357.5 232 76.3
RcHm_v2.0_Chr1g0322011 Rosa chinensis HOM05D005955 ORTHO05D007633 8.8e-97 357.5 231 76.6
CsaV3_5G036650 Cucumis sativus L. HOM05D005955 ORTHO05D007633 2.0e-96 356.3 248 70.6
ClCG05G026720 Citrullus lanatus HOM05D005955 ORTHO05D007633 4.3e-96 355.1 248 70.2
Sabra01G0018900 Salix brachista HOM05D005955 ORTHO05D007633 4.3e-96 355.1 254 69.7
Thhalv10010628m.g Eutrema salsugineum HOM05D005955 ORTHO05D007633 5.7e-96 354.8 239 72.4
AUR62026845 Chenopodium quinoa HOM05D005955 ORTHO05D007633 2.2e-95 352.8 248 69.4
ECA248G0357 Erigeron canadensis HOM05D005955 ORTHO05D007633 4.8e-95 351.7 232 74.1
Cpa.g.sc223.13 Carica papaya HOM05D005955 ORTHO05D007633 8.2e-95 350.9 231 75.3
C08p29670 Brassica napus HOM05D005955 ORTHO05D007633 1.1e-94 350.5 241 73.0
HanXRQChr11g0341831 Helianthus annuus HOM05D005955 ORTHO05D007633 1.4e-94 350.1 232 73.7
BolC8t50576H Brassica oleracea HOM05D005955 ORTHO05D007633 2.4e-94 349.4 241 72.2
Sp5g07940 Schrenkiella parvula HOM05D005955 ORTHO05D007633 2.4e-94 349.4 239 71.5
CANSAT56G4499 Cannabis sativa HOM05D005955 ORTHO05D007633 3.1e-94 349.0 242 72.7
Sed0001833 Sechium edule HOM05D005955 ORTHO05D007633 4.1e-94 348.6 231 72.3
CAN.G476.5 Capsicum annuum HOM05D005955 ORTHO05D007633 5.3e-94 348.2 208 80.8
Aa31sc434G20 Aethionema arabicum HOM05D005955 ORTHO05D007633 6.9e-94 347.8 239 71.1
BcaB01g00190 Brassica carinata HOM05D005955 ORTHO05D007633 9.1e-94 347.4 242 71.5
A09p47410 Brassica napus HOM05D005955 ORTHO05D007633 9.1e-94 347.4 241 72.2
Gorai.012G017000 Gossypium raimondii HOM05D005955 ORTHO05D007633 9.1e-94 347.4 282 66.0
Cfa010889 Carpinus fangiana HOM05D005955 ORTHO05D007633 1.5e-93 346.7 222 78.4
BcaB02g08444 Brassica carinata HOM05D005955 ORTHO05D007633 2.0e-93 346.3 240 71.2
AL5G35530 Arabidopsis lyrata HOM05D005955 ORTHO05D007633 2.6e-93 345.9 242 71.1
Aqoxy2G00337 Aquilegia oxysepala HOM05D005955 ORTHO05D007633 3.4e-93 345.5 232 72.8
AT3G54480 Arabidopsis thaliana HOM05D005955 ORTHO05D007633 3.4e-93 345.5 256 66.4
Gohir.A05G401400 Gossypium hirsutum HOM05D005955 ORTHO05D007633 4.5e-93 345.1 247 72.1
Zm00001eb329830 Zea mays HOM05D005955 ORTHO05D007633 5.9e-93 344.7 227 72.2
Lj7A580T60 Lonicera japonica HOM05D005955 ORTHO05D007633 1.3e-92 343.6 215 78.6
PGR031G3892 Punica granatum HOM05D005955 ORTHO05D007633 1.7e-92 343.2 228 74.6
Carub.0005s2110 Capsella rubella HOM05D005955 ORTHO05D007633 2.2e-92 342.8 240 69.6
PSO384G0859 Papaver somniferum HOM05D005955 ORTHO05D007633 3.8e-92 342.0 234 70.9
A04p05350 Brassica napus HOM05D005955 ORTHO05D007633 5.0e-92 341.7 242 69.8
Gohir.D04G013700 Gossypium hirsutum HOM05D005955 ORTHO05D007633 8.5e-92 340.9 282 64.5
TPR.G17810 Trifolium pratense HOM05D005955 ORTHO05D007633 1.9e-91 339.7 259 66.8
BraA04t16235Z Brassica rapa HOM05D005955 ORTHO05D007633 3.2e-91 339.0 241 70.5
Lsat_1_v5_gn_1_114801 Lactuca sativa HOM05D005955 ORTHO05D007633 4.2e-91 338.6 244 70.5
PSO339G4535 Papaver somniferum HOM05D005955 ORTHO05D007633 5.5e-91 338.2 234 70.5
Ah.10g030640 Amaranthus hybridus HOM05D000390 ORTHO05D000577 7.2e-91 337.8 232 72.8
CSS0041352 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 1.6e-90 336.7 213 78.4
BcaC02g09066 Brassica carinata HOM05D005955 ORTHO05D007633 7.9e-90 334.3 246 67.1
C04p38040 Brassica napus HOM05D005955 ORTHO05D007633 7.9e-90 334.3 246 67.1
Lj3g0013196 Lotus japonicus HOM05D005955 ORTHO05D007633 3.9e-89 332.0 231 71.9
DCAR_031830 Daucus carota HOM05D005955 ORTHO05D007633 2.0e-88 329.7 210 75.7
Sc10g0004360 Simmondsia chinensis HOM05D005955 ORTHO05D007633 3.3e-88 328.9 214 75.2
Hund15721 Selenicereus undatus HOM05D005955 ORTHO05D007633 5.7e-88 328.2 330 54.5
HPP92_025011 Vanilla planifolia HOM05D005955 ORTHO05D007633 1.3e-87 327.0 238 67.6
ATR0075G002 Amborella trichopoda HOM05D005955 ORTHO05D007633 2.6e-85 319.3 231 69.3
Hma1.2p1_1251F.1_g270450 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 2.2e-84 316.2 198 79.3
COL.COLO4_21458 Corchorus olitorius HOM05D005955 ORTHO05D007633 2.9e-84 315.8 209 74.2
MELO3C012462.2 Cucumis melo HOM05D005955 ORTHO05D007633 1.2e-82 310.5 219 69.4
Nn2g14899 Nelumbo nucifera HOM05D005955 ORTHO05D007633 6.1e-82 308.1 202 75.7
Os07g0659700 Oryza sativa ssp. japonica HOM05D005955 ORTHO05D007633 2.7e-77 292.7 201 70.6
Dinv09283 Davidia involucrata HOM05D005955 ORTHO05D007633 2.6e-72 276.2 168 80.4
SEGI_28535 Sequoiadendron giganteum HOM05D005955 ORTHO05D007633 9.8e-72 274.2 226 61.5
arahy.Tifrunner.gnm1.ann1.NJCB22 Arachis hypogaea HOM05D005955 ORTHO05D007633 4.8e-71 271.9 308 51.9
Atru.chr12.1174 Acer truncatum HOM05D005955 ORTHO05D007633 1.2e-64 250.8 174 72.4
AagrBONN_evm.TU.Sc2ySwM_344.4523 Anthoceros agrestis HOM05D005955 ORTHO05D007633 3.4e-64 249.2 229 53.7
Pp3c5_2560 Physcomitrium patens HOM05D005955 ORTHO05D007633 3.6e-58 229.2 224 52.7
SMO172G0212 Selaginella moellendorffii HOM05D005955 ORTHO05D007633 8.0e-58 228.0 235 49.8
CDE12G0962 Ceratophyllum demersum HOM05D005955 ORTHO05D007633 2.2e-55 219.9 139 74.8
CBR_g30624 Chara braunii HOM05D005955 ORTHO05D007633 1.0e-52 211.1 227 49.3
Manes.08G167250 Manihot esculenta HOM05D005955 ORTHO05D007633 5.8e-48 195.3 133 72.2
AUR62037202 Chenopodium quinoa HOM05D005955 ORTHO05D007633 2.4e-46 189.9 137 68.6
BraA09t40201Z Brassica rapa HOM05D005955 ORTHO05D007633 7.8e-45 184.9 146 65.8
BolC8t50572H Brassica oleracea HOM05D005955 ORTHO05D007633 1.0e-44 184.5 146 65.1
BolC8t50570H Brassica oleracea HOM05D005955 ORTHO05D007633 5.0e-44 182.2 146 64.4
Ciclev10002701m.g Citrus clementina HOM05D005955 ORTHO05D007633 3.6e-42 176.0 184 53.3
AUR62037203 Chenopodium quinoa HOM05D005955 ORTHO05D007633 6.2e-42 175.3 111 72.1
Manes.11G001251 Manihot esculenta HOM05D005955 ORTHO05D007633 6.4e-39 165.2 114 72.8
Psat7g193960 Pisum sativum HOM05D005955 ORTHO05D007633 8.6e-36 154.8 96 78.1
CARHR164380 Cardamine hirsuta HOM05D005955 ORTHO05D007633 5.6e-35 152.1 122 63.9
C08p29620 Brassica napus HOM05D005955 ORTHO05D007633 1.4e-30 137.5 75 84.0
CANSAT01G1797 Cannabis sativa HOM05D005955 ORTHO05D007633 2.4e-30 136.7 95 71.6
Migut.N01795 Erythranthe guttata HOM05D005955 ORTHO05D007633 2.1e-26 123.6 113 61.9
Nn8g40481 Nelumbo nucifera HOM05D005955 ORTHO05D007633 2.6e-24 116.7 66 75.8
PRCOL_00001745 Prasinoderma coloniale HOM05D005955 ORTHO05D007633 1.3e-15 87.8 192 31.2
TPR.G7208 Trifolium pratense HOM05D005955 ORTHO05D007633 6.4e-15 85.5 47 78.7
BcaC08g45413 Brassica carinata HOM05D005955 ORTHO05D007633 1.1e-11 74.7 114 43.0
BcaB05g22681 Brassica carinata HOM05D005955 ORTHO05D007633 9.6e-11 71.6 114 42.1


User provided reference genes

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