Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold232G43504 Striga asiatica HOM05D006097 ORTHO05D008538 0.0e+00 1178.3 584 100.0
Migut.N01845 Erythranthe guttata HOM05D006097 ORTHO05D008538 2.1e-279 965.3 587 79.7
SalBow6G4726 Salvia bowleyana HOM05D006097 ORTHO05D008538 2.8e-255 885.2 617 71.5
Dinv22036 Davidia involucrata HOM05D006097 ORTHO05D008538 1.5e-248 862.8 576 72.7
Actinidia21518 Actinidia chinensis HOM05D006097 ORTHO05D008538 4.4e-245 851.3 574 71.6
Prupe.2G036100 Prunus persica HOM05D006097 ORTHO05D008538 7.8e-242 840.5 577 70.7
MD07G1040200 Malus domestica HOM05D006097 ORTHO05D008538 1.1e-240 836.6 573 70.2
Nitab4.5_0001621g0010 Nicotiana tabacum HOM05D006097 ORTHO05D008538 2.1e-239 832.4 585 69.7
Peaxi162Scf00767g00518 Petunia axillaris HOM05D006097 ORTHO05D008538 2.4e-238 828.9 548 72.4
QL04p017855 Quercus lobata HOM05D006097 ORTHO05D008538 7.6e-237 823.9 586 69.5
Sopen08g005450 Solanum pennellii HOM05D006097 ORTHO05D008538 4.2e-235 818.1 582 68.9
Haze_03039 Corylus avellana HOM05D006097 ORTHO05D008538 1.6e-234 816.2 574 68.6
HanXRQChr04g0113861 Helianthus annuus HOM05D006097 ORTHO05D008538 1.0e-233 813.5 537 71.7
CAN.G176.2 Capsicum annuum HOM05D006097 ORTHO05D008538 5.1e-233 811.2 584 68.5
GSVIVG01013488001 Vitis vinifera HOM05D006097 ORTHO05D008538 6.7e-233 810.8 572 69.9
COL.COLO4_20657 Corchorus olitorius HOM05D006097 ORTHO05D008538 1.5e-232 809.7 581 67.8
CiPaw.14G007600 Carya illinoinensis HOM05D006097 ORTHO05D008538 7.4e-232 807.4 535 71.4
Cc02_g30220 Coffea canephora HOM05D006097 ORTHO05D008538 6.2e-231 804.3 589 66.9
ECA236G3136 Erigeron canadensis HOM05D006097 ORTHO05D008538 1.8e-230 802.7 570 66.7
Gohir.D06G184900 Gossypium hirsutum HOM05D006097 ORTHO05D008538 4.0e-230 801.6 582 66.8
RcHm_v2.0_Chr1g0324291 Rosa chinensis HOM05D006097 ORTHO05D008538 1.2e-229 800.0 577 67.8
Gorai.010G216200 Gossypium raimondii HOM05D006097 ORTHO05D008538 2.0e-229 799.3 584 66.8
Gohir.A06G175000 Gossypium hirsutum HOM05D006097 ORTHO05D008538 2.6e-229 798.9 582 66.3
Cfa010917 Carpinus fangiana HOM05D006097 ORTHO05D008538 4.5e-229 798.1 572 68.0
PSO339G1331 Papaver somniferum HOM05D006097 ORTHO05D008538 4.5e-229 798.1 576 68.4
Manes.04G159300 Manihot esculenta HOM05D006097 ORTHO05D008538 4.9e-228 794.7 585 66.5
Atru.chr7.628 Acer truncatum HOM05D006097 ORTHO05D008538 1.1e-227 793.5 580 66.4
Ciclev10004623m.g Citrus clementina HOM05D006097 ORTHO05D008538 1.1e-227 793.5 577 67.2
Potri.003G196300 Populus trichocarpa HOM05D006097 ORTHO05D008538 1.9e-227 792.7 534 72.1
Lsat_1_v5_gn_7_31901 Lactuca sativa HOM05D006097 ORTHO05D004880 3.2e-227 792.0 535 70.7
Duzib114G0946 Durio zibethinus HOM05D006097 ORTHO05D008538 3.5e-226 788.5 582 66.5
Thecc.10G154600 Theobroma cacao HOM05D006097 ORTHO05D008538 3.9e-225 785.0 584 65.2
Nn2g14836 Nelumbo nucifera HOM05D006097 ORTHO05D008538 5.1e-225 784.6 575 67.5
FAN01G0546 Fragaria x ananassa HOM05D006097 ORTHO05D008538 2.5e-224 782.3 534 69.1
CANSAT56G2143 Cannabis sativa HOM05D006097 ORTHO05D008538 1.0e-220 770.4 534 67.6
FvH4_7g03070 Fragaria vesca HOM05D006097 ORTHO05D008538 1.0e-220 770.4 529 68.6
THA.LOC104826726 Tarenaya hassleriana HOM05D006097 ORTHO05D008538 1.0e-220 770.4 574 65.0
Sabra03G0146400 Salix brachista HOM05D006097 ORTHO05D008538 1.3e-220 770.0 576 66.1
CSS0004732 Camellia sinensis var. sinensis HOM05D006097 ORTHO05D008538 1.1e-219 766.9 571 66.7
PGR031G1965 Punica granatum HOM05D006097 ORTHO05D008538 3.2e-219 765.4 572 65.4
Hund13358 Selenicereus undatus HOM05D006097 ORTHO05D008538 7.1e-219 764.2 574 64.1
TPR.G17806 Trifolium pratense HOM05D006097 ORTHO05D008538 2.2e-215 752.7 582 62.7
Psat5g221440 Pisum sativum HOM05D006097 ORTHO05D008538 3.7e-215 751.9 578 63.0
Medtr3g014750 Medicago truncatula HOM05D006097 ORTHO05D008538 4.8e-215 751.5 581 63.2
BraA04t16135Z Brassica rapa HOM05D006097 ORTHO05D008538 8.2e-215 750.7 576 63.0
Ah.12g062830 Amaranthus hybridus HOM05D006097 ORTHO05D008538 5.3e-214 748.0 572 62.4
Lj3g0013868 Lotus japonicus HOM05D006097 ORTHO05D008538 6.9e-214 747.7 537 68.0
AUR62032650 Chenopodium quinoa HOM05D006097 ORTHO05D008538 9.0e-214 747.3 577 61.9
C04p36530 Brassica napus HOM05D006097 ORTHO05D008538 1.7e-212 743.0 576 62.2
A04p04190 Brassica napus HOM05D006097 ORTHO05D008538 2.9e-212 742.3 576 62.7
BcaC02g09793 Brassica carinata HOM05D006097 ORTHO05D008538 1.1e-211 740.3 576 62.0
Lalb_Chr19g0132421 Lupinus albus HOM05D006097 ORTHO05D008538 1.4e-211 740.0 580 62.4
Glyma.13G197200 Glycine max HOM05D006097 ORTHO05D008538 4.2e-211 738.4 535 66.7
Thhalv10010237m.g Eutrema salsugineum HOM05D006097 ORTHO05D008538 9.4e-211 737.3 572 63.6
Sp5g06630 Schrenkiella parvula HOM05D006097 ORTHO05D008538 2.1e-210 736.1 576 62.0
BcaB02g08396 Brassica carinata HOM05D006097 ORTHO05D008538 4.6e-210 734.9 576 61.8
AL5G37140 Arabidopsis lyrata HOM05D006097 ORTHO05D008538 7.9e-210 734.2 574 62.4
Aa31LG10G10820 Aethionema arabicum HOM05D006097 ORTHO05D008538 1.0e-209 733.8 583 62.1
ATR0745G019 Amborella trichopoda HOM05D006097 ORTHO05D008538 1.8e-209 733.0 574 62.0
BolC4t25143H Brassica oleracea HOM05D006097 ORTHO05D008538 3.9e-209 731.9 594 60.3
CsaV3_5G036770 Cucumis sativus L. HOM05D006097 ORTHO05D008538 3.9e-209 731.9 535 65.0
Carub.0005s2263 Capsella rubella HOM05D006097 ORTHO05D008538 2.5e-208 729.2 578 61.2
Hma1.2p1_1627F.1_g294440 Hydrangea macrophylla HOM05D006097 ORTHO05D008538 8.2e-207 724.2 462 75.3
Aqoxy2G00367 Aquilegia oxysepala HOM05D006097 ORTHO05D008538 3.1e-206 722.2 512 68.2
AUR62026861 Chenopodium quinoa HOM05D006097 ORTHO05D008538 4.5e-205 718.4 577 60.5
CARHR165960 Cardamine hirsuta HOM05D006097 ORTHO05D008538 5.5e-203 711.4 569 61.5
PGSC0003DMG400025223 Solanum tuberosum HOM05D006097 ORTHO05D008538 7.2e-203 711.1 468 72.6
Eucgr.G03235 Eucalyptus grandis HOM05D006097 ORTHO05D008538 4.7e-202 708.4 572 61.4
EL10Ac2g02801 Beta vulgaris HOM05D006097 ORTHO05D008538 6.1e-202 708.0 637 55.4
arahy.Tifrunner.gnm1.ann1.HF4B4K Arachis hypogaea HOM05D006097 ORTHO05D008538 3.9e-201 705.3 631 57.7
Solyc08g014470.4 Solanum lycopersicum HOM05D006097 ORTHO05D008538 1.1e-200 703.7 461 72.7
HPP92_013975 Vanilla planifolia HOM05D006097 ORTHO05D008538 5.7e-200 701.4 571 60.1
Os01g0952700 Oryza sativa ssp. japonica HOM05D006097 ORTHO05D008538 1.4e-198 696.8 566 58.8
ClCG05G026810 Citrullus lanatus HOM05D006097 ORTHO05D008538 8.5e-196 687.6 551 61.3
DCAR_031244 Daucus carota HOM05D006097 ORTHO05D008538 4.2e-195 685.3 464 70.7
SEGI_19069 Sequoiadendron giganteum HOM05D006097 ORTHO05D008538 4.2e-187 658.7 571 56.4
Phvul.011G206500 Phaseolus vulgaris HOM05D006097 ORTHO05D008538 5.5e-187 658.3 478 66.7
unitig_52.g17390 Utricularia gibba HOM05D006097 ORTHO05D008538 4.7e-186 655.2 513 66.1
Hma1.2p1_1627F.1_g294450 Hydrangea macrophylla HOM05D006097 ORTHO05D008538 1.5e-184 650.2 462 69.5
Sc07g0002170 Simmondsia chinensis HOM05D006097 ORTHO05D008538 2.6e-184 649.4 461 65.7
Rhsim01G0124100 Rhododendron simsii HOM05D005112 ORTHO05D006681 7.7e-181 637.9 537 61.3
arahy.Tifrunner.gnm1.ann1.RMFD7W Arachis hypogaea HOM05D006097 ORTHO05D008538 8.6e-172 607.8 619 52.8
MBI19_g07612_MAGBIO Magnolia biondii HOM05D006097 ORTHO05D008538 1.0e-169 600.9 532 58.8
MELO3C012474.2 Cucumis melo HOM05D006097 ORTHO05D008538 1.3e-167 594.0 426 66.4
QL04p017846 Quercus lobata HOM05D006097 ORTHO05D008538 8.3e-167 591.3 395 71.6
AT3G55850 Arabidopsis thaliana HOM05D006097 ORTHO05D008538 3.2e-166 589.3 458 63.5
Mapoly0021s0162 Marchantia polymorpha HOM05D006097 ORTHO05D008538 1.7e-159 567.0 543 51.0
Sed0002543 Sechium edule HOM05D006097 ORTHO05D008538 5.4e-158 562.0 549 53.6
SMO367G1089 Selaginella moellendorffii HOM05D006097 ORTHO05D008538 9.5e-155 551.2 572 48.6
Pp3c20_1490 Physcomitrium patens HOM05D006097 ORTHO05D008538 2.9e-151 539.7 541 49.9
Oeu048573.1 Olea europaea HOM05D006097 ORTHO05D008538 6.4e-151 538.5 362 72.1
AagrBONN_evm.TU.Sc2ySwM_340.253 Anthoceros agrestis HOM05D006097 ORTHO05D008538 1.7e-148 530.4 532 49.1
TAR623G0406 Trochodendron aralioides HOM05D006097 ORTHO05D008538 4.3e-147 525.8 349 72.2
AUR62037188 Chenopodium quinoa HOM05D006097 ORTHO05D008538 6.4e-143 511.9 396 61.9
Glyma.15G235400 Glycine max HOM05D006097 ORTHO05D008538 1.5e-128 464.2 493 49.3
CDE06G1230 Ceratophyllum demersum HOM05D006097 ORTHO05D008538 7.3e-123 445.3 354 60.5
Ca_26912_v3 Cicer arietinum L. HOM05D006097 ORTHO05D008538 7.1e-118 428.7 296 66.2
FAN06G0154 Fragaria x ananassa HOM05D005112 ORTHO05D006681 9.0e-113 411.8 534 42.9
vmacro12697 Vaccinium macrocarpon HOM05D006097 ORTHO05D008538 1.2e-112 411.4 263 74.9
Lj9A654G51 Lonicera japonica HOM05D006097 ORTHO05D008538 3.4e-104 383.3 238 76.9
Thhalv10010899m.g Eutrema salsugineum HOM05D006097 ORTHO05D008538 1.9e-102 377.5 310 59.7
VMungo1127G1698 Vigna mungo HOM05D006097 ORTHO05D008538 5.5e-102 375.9 269 68.4
FAN10G0529 Fragaria x ananassa HOM05D006097 ORTHO05D008538 3.4e-96 356.7 659 36.3
MCO06G284 Micromonas commoda HOM05D006097 ORTHO05D008538 5.5e-94 349.4 592 37.3
SMO367G0062 Selaginella moellendorffii HOM05D006097 ORTHO05D005621 7.2e-94 349.0 546 40.3
Zm00001eb140700 Zea mays HOM05D006097 ORTHO05D008538 6.1e-85 319.3 248 62.1
Cre06.g279350 Chlamydomonas reinhardtii HOM05D006097 ORTHO05D008538 7.5e-75 285.8 453 37.7
SMO343G0029 Selaginella moellendorffii HOM05D004978 ORTHO05D005621 1.8e-68 264.6 509 35.4
TAR623G0702 Trochodendron aralioides HOM05D006097 ORTHO05D008538 1.6e-64 251.5 203 61.6
VMungo1127G1548 Vigna mungo HOM05D006097 ORTHO05D008538 7.2e-62 242.7 176 63.1
Lj9A654T55 Lonicera japonica HOM05D006097 ORTHO05D008538 4.9e-58 229.9 141 74.5
Cre07.g313350 Chlamydomonas reinhardtii HOM05D006097 ORTHO05D008538 1.2e-56 225.3 534 30.7
PRCOL_00006109 Prasinoderma coloniale HOM05D006097 ORTHO05D008538 4.3e-54 216.9 397 36.0
Pp3s32_630 Physcomitrium patens HOM05D006097 ORTHO05D008538 4.0e-52 210.3 519 29.3
QL04p017840 Quercus lobata HOM05D006097 ORTHO05D008538 2.8e-45 187.6 123 71.5
Ca_03883_v3 Cicer arietinum L. HOM05D006097 ORTHO05D008538 5.6e-30 136.7 95 67.4
CDE06G0927 Ceratophyllum demersum HOM05D006097 ORTHO05D020391 7.3e-30 136.3 142 50.0
Nn2g16009 Nelumbo nucifera HOM05D006097 ORTHO05D008538 1.3e-26 125.6 89 65.2
SMO197G0087 Selaginella moellendorffii HOM05D003320 ORTHO05D003941 2.4e-25 121.3 198 43.4
DCAR_031243 Daucus carota HOM05D006097 ORTHO05D020391 1.5e-22 112.1 118 51.7
CDE06G2151 Ceratophyllum demersum HOM05D006097 ORTHO05D008538 4.3e-22 110.5 82 63.4
SMO274G0019 Selaginella moellendorffii HOM05D009261 ORTHO05D011006 4.3e-22 110.5 110 52.7
SMO125G0001 Selaginella moellendorffii HOM05D009261 ORTHO05D011006 1.1e-20 105.9 146 42.5
SMO212G0005 Selaginella moellendorffii HOM05D009261 ORTHO05D011006 1.4e-20 105.5 115 49.6
SMO009G0029 Selaginella moellendorffii HOM05D009261 ORTHO05D011006 6.8e-20 103.2 113 49.6
Medtr1224s0010 Medicago truncatula HOM05D006097 ORTHO05D008538 1.5e-19 102.1 503 25.0
SMO005G0015 Selaginella moellendorffii HOM05D006097 ORTHO05D011308 1.1e-17 95.9 105 45.7
SEGI_33421 Sequoiadendron giganteum HOM05D006097 ORTHO05D020391 1.2e-16 92.4 111 45.0
Carub.0002s2671 Capsella rubella HOM05D006097 ORTHO05D008538 1.6e-16 92.0 52 75.0
RcHm_v2.0_Chr6g0254811 Rosa chinensis HOM05D006097 ORTHO05D020391 3.6e-13 80.9 56 66.1
CDE06G1678 Ceratophyllum demersum HOM05D006097 ORTHO05D008538 3.8e-10 70.9 55 58.2
Nn313s46297 Nelumbo nucifera HOM05D006097 ORTHO05D008538 7.9e-08 63.2 46 67.4
BolC8t50740H Brassica oleracea HOM05D035890 ORTHO05D033370 1.7e-07 62.0 47 59.6
Hma1.2p1_0269F.1_g107740 Hydrangea macrophylla HOM05D006097 ORTHO05D020391 2.5e-06 58.2 38 71.1
Hma1.2p1_3244F.1_g334325 Hydrangea macrophylla HOM05D006097 ORTHO05D020391 2.5e-06 58.2 38 71.1


User provided reference genes

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