Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold231G43447 Striga asiatica HOM05D006330 ORTHO05D008013 9.6e-181 636.7 325 100.0
SalBow3G0290 Salvia bowleyana HOM05D006330 ORTHO05D008013 1.7e-137 493.0 312 80.8
MSTRG.21296 Avicennia marina HOM05D006330 ORTHO05D008013 2.7e-135 485.7 327 78.6
Migut.D00775 Erythranthe guttata HOM05D006330 ORTHO05D008013 3.3e-133 478.8 326 76.7
Lj2C1112G6 Lonicera japonica HOM05D006330 ORTHO05D008013 7.2e-120 434.5 274 81.0
Cfa010572 Carpinus fangiana HOM05D006330 ORTHO05D008013 3.6e-119 432.2 312 73.7
Cc01_g15880 Coffea canephora HOM05D006330 ORTHO05D008013 2.3e-118 429.5 288 77.8
Sopen09g015980 Solanum pennellii HOM05D006330 ORTHO05D008013 3.0e-118 429.1 279 78.1
Haze_03505 Corylus avellana HOM05D006330 ORTHO05D008013 4.0e-118 428.7 312 72.8
Ciclev10015989m.g Citrus clementina HOM05D006330 ORTHO05D008013 7.5e-117 424.5 315 71.1
Lsat_1_v5_gn_9_16880 Lactuca sativa HOM05D006330 ORTHO05D008013 9.8e-117 424.1 303 73.3
Atru.chr6.3528 Acer truncatum HOM05D006330 ORTHO05D008013 1.7e-116 423.3 286 76.2
Actinidia34530 Actinidia chinensis HOM05D006330 ORTHO05D008013 4.8e-116 421.8 318 70.1
GSVIVG01001532001 Vitis vinifera HOM05D006330 ORTHO05D008013 1.1e-115 420.6 255 82.0
RcHm_v2.0_Chr6g0282221 Rosa chinensis HOM05D006330 ORTHO05D008013 1.8e-115 419.9 287 76.0
Actinidia23802 Actinidia chinensis HOM05D006330 ORTHO05D008013 2.4e-115 419.5 318 69.8
Gorai.007G161200 Gossypium raimondii HOM05D006330 ORTHO05D008013 2.4e-115 419.5 267 78.3
TAR362G0826 Trochodendron aralioides HOM05D006330 ORTHO05D008013 2.4e-115 419.5 308 71.8
DCAR_004774 Daucus carota HOM05D006330 ORTHO05D008013 3.1e-115 419.1 314 70.1
Gohir.D11G150300 Gossypium hirsutum HOM05D006330 ORTHO05D008013 5.4e-115 418.3 267 78.3
FAN15G1514 Fragaria x ananassa HOM05D006330 ORTHO05D008013 1.2e-114 417.2 287 75.3
Gohir.A11G143900 Gossypium hirsutum HOM05D006330 ORTHO05D008013 1.6e-114 416.8 267 77.9
CiPaw.13G055600 Carya illinoinensis HOM05D006330 ORTHO05D008013 2.0e-114 416.4 311 71.4
Duzib133G1456 Durio zibethinus HOM05D006330 ORTHO05D008013 2.0e-114 416.4 269 77.3
ECA247G1307 Erigeron canadensis HOM05D006330 ORTHO05D008013 2.0e-114 416.4 266 77.1
MBI10_g35385_MAGBIO Magnolia biondii HOM05D006330 ORTHO05D008013 4.5e-114 415.2 294 73.8
Nn7g37444 Nelumbo nucifera HOM05D006330 ORTHO05D008013 4.5e-114 415.2 298 72.1
FvH4_2g17480 Fragaria vesca HOM05D006330 ORTHO05D008013 1.0e-113 414.1 287 74.6
HanXRQChr07g0190561 Helianthus annuus HOM05D006330 ORTHO05D008013 1.0e-113 414.1 268 78.0
QL09p047707 Quercus lobata HOM05D006330 ORTHO05D008013 1.0e-113 414.1 309 70.2
Zm00001eb168340 Zea mays HOM05D006330 ORTHO05D008013 1.0e-113 414.1 256 79.3
MD10G1148200 Malus domestica HOM05D006330 ORTHO05D008013 1.3e-113 413.7 282 76.6
Thecc.01G207700 Theobroma cacao HOM05D006330 ORTHO05D008013 1.3e-113 413.7 255 80.8
Sc05g0001630 Simmondsia chinensis HOM05D006330 ORTHO05D008013 8.5e-113 411.0 257 79.4
Eucgr.K02361 Eucalyptus grandis HOM05D006330 ORTHO05D008013 1.5e-112 410.2 266 77.4
PGR044G2230 Punica granatum HOM05D006330 ORTHO05D008013 1.5e-112 410.2 260 80.4
FAN24G2605 Fragaria x ananassa HOM05D006330 ORTHO05D008013 2.5e-112 409.5 287 73.9
Os11g0247400 Oryza sativa ssp. japonica HOM05D006330 ORTHO05D008013 2.5e-112 409.5 268 76.1
TWI36G1481 Tripterygium wilfordii HOM05D006330 ORTHO05D008013 3.2e-112 409.1 255 81.6
Manes.12G055500 Manihot esculenta HOM05D006330 ORTHO05D008013 4.2e-112 408.7 289 72.3
PSO675G8704 Papaver somniferum HOM05D006330 ORTHO05D008013 7.2e-112 407.9 276 75.7
CANSAT01G2136 Cannabis sativa HOM05D006330 ORTHO05D008013 1.2e-111 407.1 291 73.9
Prupe.8G187200 Prunus persica HOM05D006330 ORTHO05D008013 2.3e-110 402.9 302 70.2
THA.LOC104804704 Tarenaya hassleriana HOM05D006330 ORTHO05D008013 4.0e-110 402.1 302 69.9
HPP92_007591 Vanilla planifolia HOM05D006330 ORTHO05D008013 8.8e-110 401.0 255 76.1
Psat4g208240 Pisum sativum HOM05D006330 ORTHO05D008013 2.6e-109 399.4 264 76.1
TPR.G17377 Trifolium pratense HOM05D006330 ORTHO05D008013 2.6e-109 399.4 269 75.1
Potri.014G175500 Populus trichocarpa HOM05D006330 ORTHO05D008013 7.5e-109 397.9 265 76.6
Glyma.03G097100 Glycine max HOM05D006330 ORTHO05D008013 9.8e-109 397.5 255 76.9
Aqoxy2G02383 Aquilegia oxysepala HOM05D006330 ORTHO05D008013 1.7e-108 396.7 242 80.6
CDE02G1604 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 2.2e-108 396.4 302 69.2
Ca_23158_v3 Cicer arietinum L. HOM05D006330 ORTHO05D008013 2.2e-108 396.4 281 73.3
Glyma.07G124200 Glycine max HOM05D006330 ORTHO05D008013 2.8e-108 396.0 255 77.3
VMungo0331G1131 Vigna mungo HOM05D006330 ORTHO05D008013 2.8e-108 396.0 300 69.3
ATR0743G141 Amborella trichopoda HOM05D006330 ORTHO05D008013 8.3e-108 394.4 302 68.9
EL10Ac5g10587 Beta vulgaris HOM05D006330 ORTHO05D008013 1.4e-107 393.7 303 69.6
arahy.Tifrunner.gnm1.ann1.84ZR2Z Arachis hypogaea HOM05D006330 ORTHO05D008013 7.0e-107 391.3 260 75.4
Phvul.010G036400 Phaseolus vulgaris HOM05D006330 ORTHO05D008013 9.2e-107 391.0 262 74.4
Rhsim01G0247700 Rhododendron simsii HOM05D006330 ORTHO05D008013 9.2e-107 391.0 240 80.0
arahy.Tifrunner.gnm1.ann1.3RIK1P Arachis hypogaea HOM05D006330 ORTHO05D008013 2.7e-106 389.4 260 75.8
Medtr8g010130 Medicago truncatula HOM05D006330 ORTHO05D008013 3.5e-106 389.0 267 73.4
MELO3C021126.2 Cucumis melo HOM05D006330 ORTHO05D008013 4.5e-106 388.7 274 72.3
Lalb_Chr12g0210221 Lupinus albus HOM05D006330 ORTHO05D008013 5.9e-106 388.3 267 73.0
CsaV3_7G026730 Cucumis sativus L. HOM05D006330 ORTHO05D008013 1.7e-105 386.7 274 71.9
AUR62008069 Chenopodium quinoa HOM05D006330 ORTHO05D008013 2.9e-105 386.0 239 80.3
ClCG09G008360 Citrullus lanatus HOM05D006330 ORTHO05D008013 6.6e-105 384.8 257 75.9
Hma1.2p1_0161F.1_g071650 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 8.6e-105 384.4 240 80.0
Sed0009827 Sechium edule HOM05D006330 ORTHO05D008013 2.5e-104 382.9 266 72.9
vmacro14689 Vaccinium macrocarpon HOM05D006330 ORTHO05D008013 1.0e-102 377.5 257 73.5
Aa31sc18G40 Aethionema arabicum HOM05D006330 ORTHO05D008013 7.5e-101 371.3 298 65.4
Ciclev10018050m.g Citrus clementina HOM05D006330 ORTHO05D008013 1.3e-100 370.5 236 79.2
Carub.0003s2579 Capsella rubella HOM05D006330 ORTHO05D008013 3.5e-98 362.5 260 71.2
AL3G41590 Arabidopsis lyrata HOM05D006330 ORTHO05D008013 1.7e-97 360.1 297 64.6
Sabra14G0134300 Salix brachista HOM05D006330 ORTHO05D008013 2.3e-97 359.8 268 72.4
AT3G25470 Arabidopsis thaliana HOM05D006330 ORTHO05D008013 1.5e-96 357.1 297 64.0
Thhalv10002617m.g Eutrema salsugineum HOM05D006330 ORTHO05D008013 1.5e-96 357.1 273 67.8
C03p54570 Brassica napus HOM05D006330 ORTHO05D008013 5.6e-96 355.1 303 63.0
BolC3t17744H Brassica oleracea HOM05D006330 ORTHO05D008013 5.6e-96 355.1 303 63.0
Sp3g22990 Schrenkiella parvula HOM05D006330 ORTHO05D008013 5.6e-96 355.1 300 63.3
CARHR101770 Cardamine hirsuta HOM05D006330 ORTHO05D008013 9.5e-96 354.4 297 64.0
Oeu049580.1 Olea europaea HOM05D006330 ORTHO05D008013 9.5e-96 354.4 227 81.1
Mapoly0006s0124 Marchantia polymorpha HOM05D006330 ORTHO05D008013 4.7e-95 352.1 250 67.2
BcaB08g34453 Brassica carinata HOM05D006330 ORTHO05D008013 8.0e-95 351.3 300 62.3
Hund09482 Selenicereus undatus HOM05D006330 ORTHO05D008013 8.0e-95 351.3 260 70.0
BraA03t13548Z Brassica rapa HOM05D006330 ORTHO05D008013 1.0e-94 350.9 306 61.8
A03p44190 Brassica napus HOM05D006330 ORTHO05D008013 1.8e-94 350.1 299 62.9
A07p06930 Brassica napus HOM05D006330 ORTHO05D008013 4.0e-94 349.0 249 70.7
BraA07t28484Z Brassica rapa HOM05D006330 ORTHO05D008013 4.0e-94 349.0 249 70.7
BcaC06g35817 Brassica carinata HOM05D006330 ORTHO05D008013 5.2e-94 348.6 249 70.7
COL.COLO4_34269 Corchorus olitorius HOM05D006330 ORTHO05D008013 2.0e-93 346.7 219 79.5
BolC7t41520H Brassica oleracea HOM05D006330 ORTHO05D008013 1.3e-92 344.0 250 70.4
C07p10530 Brassica napus HOM05D006330 ORTHO05D008013 2.2e-92 343.2 250 70.4
Peaxi162Scf00841g00112 Petunia axillaris HOM05D006330 ORTHO05D008013 3.7e-92 342.4 336 60.4
Lj3g0006219 Lotus japonicus HOM05D006330 ORTHO05D008013 2.4e-91 339.7 243 72.8
Pp3c24_1560 Physcomitrium patens HOM05D006330 ORTHO05D008013 7.0e-91 338.2 260 63.8
AUR62028646 Chenopodium quinoa HOM05D006330 ORTHO05D008013 1.2e-90 337.4 215 77.7
Nitab4.5_0000038g0340 Nicotiana tabacum HOM05D006330 ORTHO05D008013 1.3e-89 334.0 255 71.8
CSS0004044 Camellia sinensis var. sinensis HOM05D006330 ORTHO05D008013 1.1e-88 330.9 257 68.5
Dinv28793 Davidia involucrata HOM05D006330 ORTHO05D008013 2.5e-88 329.7 257 70.0
Nitab4.5_0010469g0010 Nicotiana tabacum HOM05D006330 ORTHO05D008013 4.3e-88 328.9 217 80.6
Solyc09g047870.4 Solanum lycopersicum HOM05D006330 ORTHO05D008013 2.8e-87 326.2 226 75.7
BcaC01g03225 Brassica carinata HOM05D006330 ORTHO05D008013 1.5e-85 320.5 303 59.1
CBR_g60689 Chara braunii HOM05D006330 ORTHO05D008013 2.6e-85 319.7 243 67.1
SMO141G0006 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 2.3e-81 306.6 254 61.8
SMO186G0001 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 2.8e-79 299.7 245 62.0
Cpa.g.sc8.41 Carica papaya HOM05D006330 ORTHO05D008013 1.3e-76 290.8 220 70.0
PSO732G0743 Papaver somniferum HOM05D006330 ORTHO05D008013 1.1e-75 287.7 193 77.2
BcaB06g26747 Brassica carinata HOM05D006330 ORTHO05D008013 9.2e-75 284.6 301 53.5
HanXRQChr07g0198371 Helianthus annuus HOM05D006330 ORTHO05D008013 9.6e-72 274.6 226 65.5
MCO07G099 Micromonas commoda HOM05D006330 ORTHO05D008013 1.8e-70 270.4 240 59.2
FAN27G2337 Fragaria x ananassa HOM05D006330 ORTHO05D008013 7.1e-67 258.5 287 56.1
Cre10.g428900 Chlamydomonas reinhardtii HOM05D006330 ORTHO05D008013 1.5e-61 240.7 244 56.1
CAN.G253.5 Capsicum annuum HOM05D006330 ORTHO05D008013 3.6e-55 219.5 135 82.2
PRCOL_00000451 Prasinoderma coloniale HOM05D006330 ORTHO05D008013 1.1e-54 218.0 315 43.5
SEGI_37995 Sequoiadendron giganteum HOM05D006330 ORTHO05D008013 1.3e-44 184.5 116 75.0
AagrBONN_evm.TU.Sc2ySwM_368.2380 Anthoceros agrestis HOM05D006330 ORTHO05D008013 5.9e-37 159.1 118 63.6
arahy.Tifrunner.gnm1.ann1.VBTZ6V Arachis hypogaea HOM05D006330 ORTHO05D008013 7.6e-37 158.7 112 69.6
PSO675G8411 Papaver somniferum HOM05D006330 ORTHO05D008013 6.5e-36 155.6 95 77.9
Hma1.2p1_0161F.1_g071660 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 2.7e-34 150.2 89 79.8
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 7.7e-29 132.1 83 77.1
CDE04G0367 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 1.3e-23 114.8 86 66.3
BcaB06g26875 Brassica carinata HOM05D006330 ORTHO05D008013 7.2e-11 72.4 64 59.4
VMungo1383G2211 Vigna mungo HOM05D006330 ORTHO05D434633 1.4e-09 68.2 44 72.7
RcHm_v2.0_Chr5g0065021 Rosa chinensis HOM05D006330 ORTHO05D008013 4.0e-09 66.6 46 67.4
Nn7g37440 Nelumbo nucifera HOM05D006330 ORTHO05D008013 9.1e-06 55.5 37 70.3


User provided reference genes

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