Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold231G43410 Striga asiatica HOM05D003999 ORTHO05D005219 1.4e-242 842.8 514 100.0
MSTRG.26544 Avicennia marina HOM05D003999 ORTHO05D005219 2.5e-122 443.4 370 59.7
Migut.L01882 Erythranthe guttata HOM05D003999 ORTHO05D005219 1.4e-114 417.5 349 59.9
Dinv41175 Davidia involucrata HOM05D003999 ORTHO05D005219 1.5e-98 364.4 347 53.6
Actinidia38494 Actinidia chinensis HOM05D003999 ORTHO05D005219 5.9e-92 342.4 350 50.0
Atru.chr7.755 Acer truncatum HOM05D003999 ORTHO05D005219 1.3e-91 341.3 305 53.4
Atru.chr7.776 Acer truncatum HOM05D003999 ORTHO05D005219 1.3e-91 341.3 305 53.4
Actinidia29951 Actinidia chinensis HOM05D003999 ORTHO05D005219 5.0e-91 339.3 308 54.2
Cc06_g20850 Coffea canephora HOM05D003999 ORTHO05D005219 1.1e-90 338.2 362 48.6
vmacro05997 Vaccinium macrocarpon HOM05D003999 ORTHO05D005219 2.5e-90 337.0 307 54.7
Cfa013453 Carpinus fangiana HOM05D003999 ORTHO05D005219 7.2e-90 335.5 306 52.6
Rhsim03G0266100 Rhododendron simsii HOM05D003999 ORTHO05D005219 7.2e-90 335.5 306 54.6
Gohir.A06G176100 Gossypium hirsutum HOM05D003999 ORTHO05D005219 1.0e-88 331.6 342 48.8
Duzib114G0910 Durio zibethinus HOM05D003999 ORTHO05D005219 1.8e-88 330.9 314 51.0
Thecc.10G174600 Theobroma cacao HOM05D003999 ORTHO05D005219 1.8e-88 330.9 343 49.0
Gohir.D06G185700 Gossypium hirsutum HOM05D003999 ORTHO05D005219 2.3e-88 330.5 352 48.0
Gorai.010G217300 Gossypium raimondii HOM05D003999 ORTHO05D005219 8.8e-88 328.6 342 48.8
Duzib106G1697 Durio zibethinus HOM05D003999 ORTHO05D005219 2.6e-87 327.0 314 50.3
unitig_8.g4939 Utricularia gibba HOM05D003999 ORTHO05D005219 6.3e-86 322.4 306 52.0
Peaxi162Scf00670g00347 Petunia axillaris HOM05D003999 ORTHO05D005219 8.3e-86 322.0 343 46.9
Ciclev10010423m.g Citrus clementina HOM05D003999 ORTHO05D005219 4.1e-85 319.7 308 50.0
CiPaw.07G197100 Carya illinoinensis HOM05D003999 ORTHO05D005219 7.0e-85 318.9 315 50.5
Migut.J00798 Erythranthe guttata HOM05D003999 ORTHO05D005219 4.5e-84 316.2 364 49.5
Hma1.2p1_1326F.1_g275830 Hydrangea macrophylla HOM05D003999 ORTHO05D005219 1.0e-83 315.1 308 51.6
Sc08g0004740 Simmondsia chinensis HOM05D003999 ORTHO05D005219 1.7e-83 314.3 306 49.3
Manes.06G019800 Manihot esculenta HOM05D003999 ORTHO05D005219 1.1e-82 311.6 349 43.6
Potri.006G075400 Populus trichocarpa HOM05D003999 ORTHO05D005219 5.5e-82 309.3 342 48.0
unitig_578.g16064 Utricularia gibba HOM05D003999 ORTHO05D005219 7.2e-82 308.9 336 47.0
Sabra06G0056300 Salix brachista HOM05D003999 ORTHO05D005219 9.4e-82 308.5 342 48.0
COL.COLO4_08503 Corchorus olitorius HOM05D003999 ORTHO05D005219 1.2e-81 308.1 347 46.7
Hund06701 Selenicereus undatus HOM05D003999 ORTHO05D005219 2.1e-81 307.4 308 49.7
Sed0001699 Sechium edule HOM05D003999 ORTHO05D005219 2.7e-81 307.0 317 49.2
Potri.018G142300 Populus trichocarpa HOM05D003999 ORTHO05D005219 3.6e-81 306.6 306 51.0
Gorai.011G210800 Gossypium raimondii HOM05D003999 ORTHO05D005219 4.7e-81 306.2 329 45.9
Prupe.1G075400 Prunus persica HOM05D003999 ORTHO05D005219 4.7e-81 306.2 306 50.0
DCAR_014666 Daucus carota HOM05D003999 ORTHO05D005219 8.0e-81 305.4 318 49.1
Sabra18G0116200 Salix brachista HOM05D003999 ORTHO05D005219 6.8e-80 302.4 321 49.8
AUR62027455 Chenopodium quinoa HOM05D003999 ORTHO05D005219 8.8e-80 302.0 312 48.4
Sopen02g019140 Solanum pennellii HOM05D003999 ORTHO05D005219 8.8e-80 302.0 316 48.1
Sed0015737 Sechium edule HOM05D003999 ORTHO05D005219 1.2e-79 301.6 316 48.7
RcHm_v2.0_Chr7g0219501 Rosa chinensis HOM05D003999 ORTHO05D005219 2.0e-79 300.8 314 49.4
Gohir.D10G188000 Gossypium hirsutum HOM05D003999 ORTHO05D005219 2.6e-79 300.4 329 45.6
EL10Ac8g19270 Beta vulgaris HOM05D003999 ORTHO05D005219 4.4e-79 299.7 373 42.4
MD13G1241700 Malus domestica HOM05D003999 ORTHO05D005219 5.7e-79 299.3 310 48.7
TAR625G1146 Trochodendron aralioides HOM05D003999 ORTHO05D005219 7.5e-79 298.9 292 49.7
MELO3C017428.2 Cucumis melo HOM05D003999 ORTHO05D005219 9.8e-79 298.5 301 49.8
AUR62031249 Chenopodium quinoa HOM05D003999 ORTHO05D005219 1.7e-78 297.7 312 48.1
CsaV3_1G031880 Cucumis sativus L. HOM05D003999 ORTHO05D005219 2.2e-78 297.4 302 49.7
Nn8g40781 Nelumbo nucifera HOM05D003999 ORTHO05D005219 2.4e-77 293.9 306 46.7
TAR626G1281 Trochodendron aralioides HOM05D003999 ORTHO05D005219 3.1e-77 293.5 307 48.5
Aqoxy7G02806 Aquilegia oxysepala HOM05D003999 ORTHO05D005219 9.2e-77 292.0 341 45.5
CAN.G79.26 Capsicum annuum HOM05D003999 ORTHO05D005219 2.0e-76 290.8 307 47.9
Lj1g0014223 Lotus japonicus HOM05D003999 ORTHO05D005219 3.5e-76 290.0 306 44.8
TAR383G0399 Trochodendron aralioides HOM05D003999 ORTHO05D005219 1.0e-75 288.5 328 45.4
FAN18G4269 Fragaria x ananassa HOM05D003999 ORTHO05D005219 3.8e-75 286.6 312 47.8
FAN04G0885 Fragaria x ananassa HOM05D003999 ORTHO05D005219 2.5e-74 283.9 312 48.1
Gohir.A10G181100 Gossypium hirsutum HOM05D003999 ORTHO05D005219 2.5e-74 283.9 330 43.6
ECA240G0372 Erigeron canadensis HOM05D003999 ORTHO05D005219 4.3e-74 283.1 303 49.2
SalBow5G4070 Salvia bowleyana HOM05D003999 ORTHO05D005219 1.2e-73 281.6 385 45.2
Psat5g048320 Pisum sativum HOM05D003999 ORTHO05D005219 3.6e-73 280.0 313 44.1
Ca_15280_v3 Cicer arietinum L. HOM05D003999 ORTHO05D005219 4.7e-73 279.6 309 45.3
TWI63G1413 Tripterygium wilfordii HOM05D003999 ORTHO05D005219 4.7e-73 279.6 311 46.9
FAN13G0316 Fragaria x ananassa HOM05D003999 ORTHO05D005219 8.0e-73 278.9 312 47.4
DCAR_018034 Daucus carota HOM05D003999 ORTHO05D005219 1.0e-72 278.5 293 48.1
Glyma.04G001900 Glycine max HOM05D003999 ORTHO05D005219 1.8e-72 277.7 306 43.5
Glyma.06G001400 Glycine max HOM05D003999 ORTHO05D005219 4.0e-72 276.6 377 39.3
Phvul.009G117100 Phaseolus vulgaris HOM05D003999 ORTHO05D005219 4.0e-72 276.6 310 43.5
Solyc02g069980.4 Solanum lycopersicum HOM05D003999 ORTHO05D005219 8.9e-72 275.4 301 46.2
VMungo1309G0585 Vigna mungo HOM05D003999 ORTHO05D005219 8.9e-72 275.4 310 43.5
Eucgr.C02221 Eucalyptus grandis HOM05D003999 ORTHO05D005219 2.0e-71 274.2 326 43.3
Nitab4.5_0001583g0100 Nicotiana tabacum HOM05D003999 ORTHO05D005219 2.6e-71 273.9 287 48.4
Lalb_Chr11g0061221 Lupinus albus HOM05D003999 ORTHO05D005219 3.4e-71 273.5 313 44.1
TWI34G1954 Tripterygium wilfordii HOM05D003999 ORTHO05D005219 3.4e-71 273.5 357 42.6
arahy.Tifrunner.gnm1.ann1.K74ZDU Arachis hypogaea HOM05D003999 ORTHO05D005219 4.4e-71 273.1 310 44.8
Nitab4.5_0001225g0140 Nicotiana tabacum HOM05D003999 ORTHO05D005219 7.5e-71 272.3 287 47.7
Medtr3g100350 Medicago truncatula HOM05D003999 ORTHO05D005219 2.2e-70 270.8 300 44.3
arahy.Tifrunner.gnm1.ann1.M9AABA Arachis hypogaea HOM05D003999 ORTHO05D005219 2.3e-67 260.8 380 40.8
HanXRQChr09g0244721 Helianthus annuus HOM05D003999 ORTHO05D005219 3.0e-67 260.4 311 45.0
Cc00_g03720 Coffea canephora HOM05D003999 ORTHO05D005219 8.6e-67 258.8 321 44.5
CiPaw.08G032500 Carya illinoinensis HOM05D003999 ORTHO05D005219 3.3e-66 256.9 309 44.0
MD16G1248600 Malus domestica HOM05D003999 ORTHO05D005219 3.3e-66 256.9 310 44.5
DCAR_020148 Daucus carota HOM05D003999 ORTHO05D005219 7.3e-66 255.8 309 45.0
TPR.G6349 Trifolium pratense HOM05D003999 ORTHO05D005219 2.8e-65 253.8 293 42.0
THA.LOC104814650 Tarenaya hassleriana HOM05D003999 ORTHO05D005219 8.0e-65 252.3 359 39.6
Haze_22020 Corylus avellana HOM05D003999 ORTHO05D005219 1.4e-64 251.5 263 47.5
MBI16_g05835_MAGBIO Magnolia biondii HOM05D003999 ORTHO05D005219 1.4e-64 251.5 316 43.0
CSS0024594 Camellia sinensis var. sinensis HOM05D003999 ORTHO05D005219 6.8e-64 249.2 265 47.2
Lsat_1_v5_gn_7_51121 Lactuca sativa HOM05D003999 ORTHO05D005219 4.9e-62 243.0 314 44.6
FvH4_5g27730 Fragaria vesca HOM05D003999 ORTHO05D005219 7.0e-61 239.2 312 43.3
FAN08G2100 Fragaria x ananassa HOM05D003999 ORTHO05D005219 2.0e-60 237.7 312 42.9
PSO170G0656 Papaver somniferum HOM05D003999 ORTHO05D005219 1.5e-58 231.5 304 39.1
Haze_18974 Corylus avellana HOM05D003999 ORTHO05D005219 2.5e-58 230.7 331 38.1
MBI13_g34042_MAGBIO Magnolia biondii HOM05D003999 ORTHO05D005219 2.1e-57 227.6 304 42.1
ATR0681G357 Amborella trichopoda HOM05D003999 ORTHO05D005219 2.3e-56 224.2 329 38.6
Potri.006G277400 Populus trichocarpa HOM05D003999 ORTHO05D005219 4.0e-56 223.4 320 36.9
Zm00001eb002000 Zea mays HOM05D003999 ORTHO05D005219 2.0e-55 221.1 290 40.7
Oeu064556.1 Olea europaea HOM05D003999 ORTHO05D005219 9.8e-55 218.8 197 52.3
CSS0017119 Camellia sinensis var. sinensis HOM05D003999 ORTHO05D005219 2.9e-54 217.2 261 44.4
Thecc.09G004800 Theobroma cacao HOM05D003999 ORTHO05D005219 8.3e-54 215.7 273 41.4
Haze_18980 Corylus avellana HOM05D003999 ORTHO05D005219 1.1e-53 215.3 350 35.4
Ciclev10008331m.g Citrus clementina HOM05D003999 ORTHO05D005219 7.1e-53 212.6 316 38.0
Os04g0425100 Oryza sativa ssp. japonica HOM05D003999 ORTHO05D005219 1.2e-52 211.8 289 39.4
Zm00001eb274650 Zea mays HOM05D003999 ORTHO05D005219 6.0e-52 209.5 321 37.1
CDE06G2299 Ceratophyllum demersum HOM05D003999 ORTHO05D005219 3.1e-48 197.2 225 43.6
PGSC0003DMG400021118 Solanum tuberosum HOM05D003999 ORTHO05D005219 5.2e-48 196.4 305 39.0
Sabra06G0215100 Salix brachista HOM05D003999 ORTHO05D005219 1.5e-47 194.9 356 32.6
Thhalv10022602m.g Eutrema salsugineum HOM05D003999 ORTHO05D005219 2.0e-47 194.5 354 34.5
Sp3g32620 Schrenkiella parvula HOM05D003999 ORTHO05D005219 4.4e-47 193.4 226 43.8
BolC9t54356H Brassica oleracea HOM05D003999 ORTHO05D005219 5.8e-47 193.0 226 43.8
ATR0626G364 Amborella trichopoda HOM05D003999 ORTHO05D005219 9.9e-47 192.2 346 36.7
BcaC04g22860 Brassica carinata HOM05D003999 ORTHO05D005219 1.7e-46 191.4 226 43.4
Cfa020676 Carpinus fangiana HOM05D003999 ORTHO05D005219 2.2e-46 191.0 331 38.4
C09p14530 Brassica napus HOM05D003999 ORTHO05D005219 4.9e-46 189.9 224 43.8
GSVIVG01010859001 Vitis vinifera HOM05D003999 ORTHO05D005219 8.4e-46 189.1 136 58.1
A07p01530 Brassica napus HOM05D003999 ORTHO05D005219 1.4e-45 188.3 240 41.7
BraA07t27954Z Brassica rapa HOM05D003999 ORTHO05D005219 1.4e-45 188.3 240 41.7
BcaB07g31614 Brassica carinata HOM05D003999 ORTHO05D005219 2.4e-45 187.6 224 43.3
Actinidia27131 Actinidia chinensis HOM05D003999 ORTHO05D005219 1.6e-44 184.9 199 48.7
CiPaw.15G150400 Carya illinoinensis HOM05D003999 ORTHO05D005219 4.6e-44 183.3 288 37.5
Atru.chr7.2670 Acer truncatum HOM05D003999 ORTHO05D005219 6.0e-44 183.0 311 34.7
CDE02G3353 Ceratophyllum demersum HOM05D003999 ORTHO05D005219 1.0e-43 182.2 226 40.7
Carub.0003s3349 Capsella rubella HOM05D003999 ORTHO05D005219 2.3e-43 181.0 346 34.7
BcaB03g16715 Brassica carinata HOM05D003999 ORTHO05D005219 1.9e-42 177.9 226 40.7
AL3G49030 Arabidopsis lyrata HOM05D003999 ORTHO05D005219 4.3e-42 176.8 336 34.5
AT2G19260 Arabidopsis thaliana HOM05D003999 ORTHO05D005219 4.3e-42 176.8 306 35.0
C07p03110 Brassica napus HOM05D003999 ORTHO05D005219 4.3e-42 176.8 227 41.9
BolC7t40703H Brassica oleracea HOM05D003999 ORTHO05D005219 4.3e-42 176.8 227 41.9
BcaC06g36543 Brassica carinata HOM05D003999 ORTHO05D005219 9.6e-42 175.6 227 41.4
MSTRG.10441 Avicennia marina HOM05D003999 ORTHO05D005219 3.1e-40 170.6 153 57.5
CARHR109720 Cardamine hirsuta HOM05D003999 ORTHO05D005219 4.0e-40 170.2 212 41.0
MSTRG.10442 Avicennia marina HOM05D003999 ORTHO05D005219 6.8e-40 169.5 101 72.3
ECA234G1030 Erigeron canadensis HOM05D003999 ORTHO05D005219 1.7e-38 164.9 175 46.9
Aa31LG8G16300 Aethionema arabicum HOM05D003999 ORTHO05D005219 2.1e-36 157.9 263 36.1
SMO117G0282 Selaginella moellendorffii HOM05D003999 ORTHO05D005219 2.6e-31 141.0 244 34.4
ClCG06G013610 Citrullus lanatus HOM05D003999 ORTHO05D005219 6.4e-30 136.3 95 62.1
SEGI_05476 Sequoiadendron giganteum HOM05D003999 ORTHO05D005219 1.3e-27 128.6 337 29.1
HPP92_010790 Vanilla planifolia HOM05D003999 ORTHO05D005219 8.7e-27 125.9 220 35.0
Mapoly0046s0104 Marchantia polymorpha HOM05D003999 ORTHO05D005219 1.1e-26 125.6 250 31.6
SEGI_29375 Sequoiadendron giganteum HOM05D003999 ORTHO05D005219 6.2e-25 119.8 296 26.7
GSVIVG01035550001 Vitis vinifera HOM05D003999 ORTHO05D005219 2.9e-22 110.9 79 58.2
MBI16_g10833_MAGBIO Magnolia biondii HOM05D003999 ORTHO05D005219 8.4e-22 109.4 204 35.8
FvH4_5g18011 Fragaria vesca HOM05D003999 ORTHO05D005219 1.1e-18 99.0 156 36.5
Prupe.5G240400 Prunus persica HOM05D003999 ORTHO05D005219 1.1e-18 99.0 146 39.7
FAN18G0538 Fragaria x ananassa HOM05D003999 ORTHO05D005219 1.5e-18 98.6 156 36.5
Manes.03G002401 Manihot esculenta HOM05D003999 ORTHO05D005219 1.9e-18 98.2 131 40.5
RcHm_v2.0_Chr7g0177591 Rosa chinensis HOM05D003999 ORTHO05D005219 4.3e-18 97.1 157 36.3
MD06G1235600 Malus domestica HOM05D003999 ORTHO05D005219 7.4e-18 96.3 154 34.4
Phvul.007G142700 Phaseolus vulgaris HOM05D003999 ORTHO05D005219 7.4e-18 96.3 180 35.6
PGR044G2313 Punica granatum HOM05D003999 ORTHO05D005219 1.6e-17 95.1 161 38.5
FAN13G0118 Fragaria x ananassa HOM05D003999 ORTHO05D005219 3.7e-17 94.0 156 35.3
Cfa020674 Carpinus fangiana HOM05D003999 ORTHO05D005219 1.0e-14 85.9 58 63.8
SEGI_17596 Sequoiadendron giganteum HOM05D003999 ORTHO05D005219 2.9e-14 84.3 212 29.7
SGA_v2.0_scaffold25G11141 Striga asiatica HOM05D004258 ORTHO05D005163 2.4e-08 64.7 237 22.4
AagrBONN_evm.TU.Sc2ySwM_368.2326 Anthoceros agrestis HOM05D000465 ORTHO05D000301 4.5e-07 60.5 46 45.7
AagrBONN_evm.TU.Sc2ySwM_340.1970 Anthoceros agrestis HOM05D000465 ORTHO05D000301 1.0e-06 59.3 47 44.7
AagrBONN_evm.TU.Sc2ySwM_344.3725 Anthoceros agrestis HOM05D000465 ORTHO05D000301 1.0e-06 59.3 46 45.7
AagrBONN_evm.TU.Sc2ySwM_368.1853 Anthoceros agrestis HOM05D000465 ORTHO05D000301 1.0e-06 59.3 47 44.7
AagrBONN_evm.TU.Sc2ySwM_340.1664 Anthoceros agrestis HOM05D000465 ORTHO05D000301 1.3e-06 58.9 49 38.8
AagrBONN_evm.TU.Sc2ySwM_344.500 Anthoceros agrestis HOM05D000465 ORTHO05D000301 1.3e-06 58.9 49 42.9
AagrBONN_evm.TU.Sc2ySwM_228.5868 Anthoceros agrestis HOM05D000465 ORTHO05D000301 1.7e-06 58.5 46 45.7
Os01g0883400 Oryza sativa ssp. japonica HOM05D004258 ORTHO05D005163 1.7e-06 58.5 109 28.4
AagrBONN_evm.TU.Sc2ySwM_344.3742 Anthoceros agrestis HOM05D000465 ORTHO05D000301 2.2e-06 58.2 46 43.5
vmacro05816 Vaccinium macrocarpon HOM05D003353 ORTHO05D003751 2.2e-06 58.2 53 37.7
AagrBONN_evm.TU.Sc2ySwM_328.3 Anthoceros agrestis HOM05D000465 ORTHO05D000301 2.9e-06 57.8 46 43.5
Aqoxy3G01754 Aquilegia oxysepala HOM05D004258 ORTHO05D005163 2.9e-06 57.8 65 32.3
BraA09t36876Z Brassica rapa HOM05D003999 ORTHO05D005219 2.9e-06 57.8 58 43.1
A09p12320 Brassica napus HOM05D003999 ORTHO05D005219 3.8e-06 57.4 52 46.2
Mapoly0100s0063 Marchantia polymorpha HOM05D000465 ORTHO05D000301 3.8e-06 57.4 45 44.4
AagrBONN_evm.TU.Sc2ySwM_340.916 Anthoceros agrestis HOM05D000465 ORTHO05D000301 5.0e-06 57.0 46 43.5
AagrBONN_evm.TU.Sc2ySwM_368.3040 Anthoceros agrestis HOM05D000465 ORTHO05D000301 5.0e-06 57.0 46 43.5
SHI09239 Sapria himalayana HOM05D004258 ORTHO05D005163 5.0e-06 57.0 126 31.7
Zm00001eb206240 Zea mays HOM05D003353 ORTHO05D003751 5.0e-06 57.0 56 33.9
AagrBONN_evm.TU.Sc2ySwM_228.2568 Anthoceros agrestis HOM05D000465 ORTHO05D000301 6.5e-06 56.6 47 42.6
AagrBONN_evm.TU.Sc2ySwM_362.493 Anthoceros agrestis HOM05D004447 ORTHO05D005973 6.5e-06 56.6 53 39.6
MSTRG.22397 Avicennia marina HOM05D004258 ORTHO05D005163 6.5e-06 56.6 55 40.0
CBR_g29301 Chara braunii HOM05D000019 ORTHO05D000048 6.5e-06 56.6 49 40.8
AagrBONN_evm.TU.Sc2ySwM_117.2232 Anthoceros agrestis HOM05D000465 ORTHO05D000301 8.5e-06 56.2 46 41.3


User provided reference genes

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