Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold230G43378 Striga asiatica HOM05D001678 ORTHO05D001698 1.1e-116 423.3 212 100.0
SGA_v2.0_scaffold27G11443 Striga asiatica HOM05D001678 ORTHO05D001698 1.6e-30 137.1 291 37.1
SGA_v2.0_scaffold68G22889 Striga asiatica HOM05D001678 ORTHO05D001698 1.6e-30 137.1 291 37.1
SGA_v2.0_scaffold27G11713 Striga asiatica HOM05D001678 ORTHO05D001698 1.9e-28 130.2 131 57.3
SGA_v2.0_scaffold612G53189 Striga asiatica HOM05D001678 ORTHO05D001698 1.6e-27 127.1 131 56.5
SGA_v2.0_scaffold177G39408 Striga asiatica HOM05D001678 ORTHO05D001698 3.4e-25 119.4 281 35.9
SGA_v2.0_scaffold230G43377 Striga asiatica HOM05D001678 ORTHO05D001698 3.4e-25 119.4 102 63.7
SGA_v2.0_scaffold2614G54162 Striga asiatica HOM05D001678 ORTHO05D001698 2.2e-21 106.7 284 32.7
SGA_v2.0_scaffold1090G53835 Striga asiatica HOM05D001678 ORTHO05D001698 2.9e-21 106.3 276 35.5
Oeu059447.1 Olea europaea HOM05D001678 ORTHO05D001698 5.0e-21 105.5 125 49.6
Oeu015820.2 Olea europaea HOM05D001678 ORTHO05D001698 2.7e-19 99.8 136 45.6
Oeu027419.1 Olea europaea HOM05D000034 ORTHO05D000037 1.7e-16 90.5 99 52.5
Oeu041525.1 Olea europaea HOM05D001678 ORTHO05D001698 5.4e-15 85.5 112 43.8
Prupe.4G168300 Prunus persica HOM05D001678 ORTHO05D001698 7.0e-15 85.1 161 34.8
Prupe.1G170700 Prunus persica HOM05D001678 ORTHO05D001698 1.2e-14 84.3 161 34.8
Oeu010520.1 Olea europaea HOM05D001678 ORTHO05D001698 5.9e-14 82.0 100 46.0
SGA_v2.0_scaffold3280G54305 Striga asiatica HOM05D001678 ORTHO05D001698 5.9e-14 82.0 113 43.4
Prupe.1G177900 Prunus persica HOM05D001678 ORTHO05D001698 1.9e-12 77.0 136 36.0
Prupe.7G073100 Prunus persica HOM05D001678 ORTHO05D001698 2.5e-12 76.6 112 39.3
Oeu060645.1 Olea europaea HOM05D001678 ORTHO05D001698 5.6e-12 75.5 72 52.8
Oeu061131.1 Olea europaea HOM05D001678 ORTHO05D001698 2.1e-11 73.6 251 31.1
Atru.chr11.726 Acer truncatum HOM05D001678 ORTHO05D001698 2.8e-11 73.2 102 43.1
Oeu051357.1 Olea europaea HOM05D001678 ORTHO05D001698 6.1e-11 72.0 168 30.4
Prupe.2G168600 Prunus persica HOM05D001678 ORTHO05D001698 6.1e-11 72.0 142 34.5
Lj3C974T6 Lonicera japonica HOM05D000034 ORTHO05D001698 8.0e-11 71.6 136 34.6
Lj4C317T2 Lonicera japonica HOM05D000034 ORTHO05D001698 8.0e-11 71.6 136 34.6
Oeu039328.1 Olea europaea HOM05D001678 ORTHO05D001698 1.0e-10 71.2 168 30.4
Atru.chr7.11 Acer truncatum HOM05D000034 ORTHO05D000037 1.8e-10 70.5 120 38.3
Glyma.08G239700 Glycine max HOM05D001678 ORTHO05D001698 1.8e-10 70.5 114 36.8
Glyma.09G071200 Glycine max HOM05D001678 ORTHO05D001698 2.3e-10 70.1 114 36.0
Prupe.6G164800 Prunus persica HOM05D001678 ORTHO05D001698 2.3e-10 70.1 134 34.3
Glyma.17G190600 Glycine max HOM05D001678 ORTHO05D001698 3.0e-10 69.7 114 36.0
Prupe.7G084200 Prunus persica HOM05D001678 ORTHO05D001698 3.0e-10 69.7 112 35.7
Glyma.01G110000 Glycine max HOM05D001678 ORTHO05D001698 4.0e-10 69.3 114 36.0
Glyma.01G111800 Glycine max HOM05D001678 ORTHO05D001698 4.0e-10 69.3 114 36.0
Glyma.04G175200 Glycine max HOM05D001678 ORTHO05D001698 4.0e-10 69.3 114 36.0
Glyma.05G193100 Glycine max HOM05D001678 ORTHO05D001698 4.0e-10 69.3 114 36.0
Glyma.06G095100 Glycine max HOM05D001678 ORTHO05D001698 4.0e-10 69.3 114 36.0
Glyma.09G168100 Glycine max HOM05D001678 ORTHO05D001698 4.0e-10 69.3 114 35.1
Glyma.11G167500 Glycine max HOM05D001678 ORTHO05D001698 4.0e-10 69.3 114 36.0
Glyma.13G184400 Glycine max HOM05D001678 ORTHO05D001698 4.0e-10 69.3 114 36.0
Glyma.14G095600 Glycine max HOM05D001678 ORTHO05D001698 4.0e-10 69.3 114 36.0
Glyma.14G219200 Glycine max HOM05D001678 ORTHO05D001698 4.0e-10 69.3 114 36.0
Glyma.15G150600 Glycine max HOM05D001678 ORTHO05D001698 4.0e-10 69.3 114 36.0
Glyma.15G233800 Glycine max HOM05D001678 ORTHO05D001698 4.0e-10 69.3 114 36.0
Glyma.17G148300 Glycine max HOM05D001678 ORTHO05D001698 4.0e-10 69.3 114 36.0
Glyma.18G175000 Glycine max HOM05D001678 ORTHO05D001698 4.0e-10 69.3 114 36.0
Glyma.19G032300 Glycine max HOM05D001678 ORTHO05D001698 4.0e-10 69.3 114 36.0
Prupe.1G229800 Prunus persica HOM05D001678 ORTHO05D001698 4.0e-10 69.3 123 35.0
Glyma.08G218300 Glycine max HOM05D001678 ORTHO05D001698 5.2e-10 68.9 101 39.6
Glyma.20G169100 Glycine max HOM05D001678 ORTHO05D001698 5.2e-10 68.9 114 36.0
RcHm_v2.0_Chr5g0052631 Rosa chinensis HOM05D001678 ORTHO05D001698 6.8e-10 68.6 114 38.6
Glyma.10G293700 Glycine max HOM05D001678 ORTHO05D001698 8.9e-10 68.2 114 35.1
Glyma.18G292500 Glycine max HOM05D001678 ORTHO05D001698 8.9e-10 68.2 114 35.1
Oeu041480.1 Olea europaea HOM05D001678 ORTHO05D001698 8.9e-10 68.2 82 51.2
Glyma.07G133600 Glycine max HOM05D001678 ORTHO05D001698 1.2e-09 67.8 114 35.1
Glyma.09G096200 Glycine max HOM05D001678 ORTHO05D001698 1.2e-09 67.8 112 35.7
Glyma.14G191800 Glycine max HOM05D001678 ORTHO05D001698 1.2e-09 67.8 114 35.1
TPR.G27895 Trifolium pratense HOM05D001678 ORTHO05D001698 1.2e-09 67.8 114 37.7
RcHm_v2.0_Chr5g0019361 Rosa chinensis HOM05D001678 ORTHO05D001698 1.5e-09 67.4 110 38.2
Glyma.10G131100 Glycine max HOM05D001678 ORTHO05D001698 2.0e-09 67.0 114 35.1
Glyma.12G113000 Glycine max HOM05D001678 ORTHO05D001698 2.0e-09 67.0 114 35.1
Glyma.10G200900 Glycine max HOM05D001678 ORTHO05D001698 2.6e-09 66.6 101 38.6
Lj8C578G2 Lonicera japonica HOM05D001678 ORTHO05D001698 2.6e-09 66.6 75 44.0
FAN10G0526 Fragaria x ananassa HOM05D001678 ORTHO05D001698 3.4e-09 66.2 128 37.5
Glyma.10G211500 Glycine max HOM05D001678 ORTHO05D001698 3.4e-09 66.2 91 40.7
Medtr1g106600 Medicago truncatula HOM05D001678 ORTHO05D001698 3.4e-09 66.2 101 38.6
Medtr6g018520 Medicago truncatula HOM05D001678 ORTHO05D001698 3.4e-09 66.2 101 38.6
Medtr6g025650 Medicago truncatula HOM05D001678 ORTHO05D001698 3.4e-09 66.2 101 38.6
Prupe.7G010100 Prunus persica HOM05D001678 ORTHO05D001698 3.4e-09 66.2 99 40.4
Atru.chr3.1295 Acer truncatum HOM05D001678 ORTHO05D001698 5.7e-09 65.5 77 45.5
FAN09G4289 Fragaria x ananassa HOM05D001678 ORTHO05D001698 5.7e-09 65.5 90 43.3
Medtr7g111990 Medicago truncatula HOM05D001678 ORTHO05D001698 2.2e-08 63.5 75 44.0
Prupe.4G156100 Prunus persica HOM05D001678 ORTHO05D001698 2.2e-08 63.5 133 29.3
Glyma.01G126100 Glycine max HOM05D001678 ORTHO05D001698 2.9e-08 63.2 91 39.6
Medtr1g106608 Medicago truncatula HOM05D001678 ORTHO05D001698 2.9e-08 63.2 101 36.6
Glyma.10G128600 Glycine max HOM05D001678 ORTHO05D001698 3.7e-08 62.8 91 39.6
FAN08G2072 Fragaria x ananassa HOM05D001678 ORTHO05D001698 4.9e-08 62.4 127 34.6
SGA_v2.0_scaffold296G47542 Striga asiatica HOM05D001678 ORTHO05D001698 6.4e-08 62.0 109 33.9
BraA01t03239Z Brassica rapa HOM05D001678 ORTHO05D001698 1.4e-07 60.8 103 34.0
Thhalv10022272m.g Eutrema salsugineum HOM05D001678 ORTHO05D001698 1.4e-07 60.8 114 33.3
Thhalv10029159m.g Eutrema salsugineum HOM05D001678 ORTHO05D001698 1.4e-07 60.8 114 33.3
PSO478G1052 Papaver somniferum HOM05D001678 ORTHO05D001698 1.4e-07 60.8 77 40.3
Prupe.2G137700 Prunus persica HOM05D001678 ORTHO05D001698 1.8e-07 60.5 95 37.9
Lj1C89T9 Lonicera japonica HOM05D001678 ORTHO05D001698 2.4e-07 60.1 75 41.3
RcHm_v2.0_Chr3g0476481 Rosa chinensis HOM05D001678 ORTHO05D001698 2.4e-07 60.1 93 36.6
Prupe.7G052500 Prunus persica HOM05D001678 ORTHO05D001698 4.1e-07 59.3 185 30.3
SalBow1G8270 Salvia bowleyana HOM05D001678 ORTHO05D001698 4.1e-07 59.3 107 30.8
DCAR_028638 Daucus carota HOM05D001678 ORTHO05D001698 5.4e-07 58.9 77 41.6
Atru.chr4.878 Acer truncatum HOM05D001678 ORTHO05D001698 9.2e-07 58.2 92 39.1
Prupe.7G105100 Prunus persica HOM05D001678 ORTHO05D001698 1.2e-06 57.8 99 37.4
Prupe.8G061600 Prunus persica HOM05D001678 ORTHO05D001698 1.2e-06 57.8 132 27.3
BolC3t20376H Brassica oleracea HOM05D001678 ORTHO05D001698 2.0e-06 57.0 101 32.7
FvH4_2g00551 Fragaria vesca HOM05D001678 ORTHO05D001698 2.0e-06 57.0 131 31.3
Atru.chr5.2051 Acer truncatum HOM05D001678 ORTHO05D001698 2.7e-06 56.6 99 35.4
FAN23G0320 Fragaria x ananassa HOM05D001678 ORTHO05D001698 2.7e-06 56.6 124 33.1
FAN26G0826 Fragaria x ananassa HOM05D001678 ORTHO05D001698 4.6e-06 55.8 120 32.5
Thhalv10015362m.g Eutrema salsugineum HOM05D001678 ORTHO05D001698 5.9e-06 55.5 106 31.1
Oeu004532.1 Olea europaea HOM05D001678 ORTHO05D001698 5.9e-06 55.5 118 36.4
Oeu043769.1 Olea europaea HOM05D001574 ORTHO05D001698 5.9e-06 55.5 109 40.4
Prupe.5G010600 Prunus persica HOM05D001678 ORTHO05D001698 5.9e-06 55.5 112 33.0
AL1G65810 Arabidopsis lyrata HOM05D000034 ORTHO05D001698 7.8e-06 55.1 118 33.1
FAN23G1752 Fragaria x ananassa HOM05D001678 ORTHO05D001698 7.8e-06 55.1 127 29.1


User provided reference genes

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