Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold227G43227 Striga asiatica HOM05D006827 ORTHO05D008725 1.8e-143 513.1 369 100.0
Migut.N00027 Erythranthe guttata HOM05D006827 ORTHO05D008725 8.9e-82 308.1 254 65.4
MSTRG.3845 Avicennia marina HOM05D006827 ORTHO05D008725 2.0e-81 307.0 244 69.7
Dinv15137 Davidia involucrata HOM05D006827 ORTHO05D008725 5.2e-74 282.3 234 63.2
Oeu014225.1 Olea europaea HOM05D006827 ORTHO05D008725 5.2e-74 282.3 231 64.9
Actinidia31567 Actinidia chinensis HOM05D006827 ORTHO05D008725 1.2e-73 281.2 225 64.0
unitig_88.g27700 Utricularia gibba HOM05D006827 ORTHO05D008725 4.4e-73 279.3 234 61.1
Nitab4.5_0002421g0010 Nicotiana tabacum HOM05D006827 ORTHO05D008725 2.9e-72 276.6 177 76.8
Cc03_g00540 Coffea canephora HOM05D006827 ORTHO05D008725 6.4e-72 275.4 240 63.3
Sopen01g023660 Solanum pennellii HOM05D006827 ORTHO05D008725 1.4e-71 274.2 195 70.8
Solyc01g058190.4 Solanum lycopersicum HOM05D006827 ORTHO05D008725 1.9e-71 273.9 195 70.8
Gorai.011G202600 Gossypium raimondii HOM05D006827 ORTHO05D008725 2.4e-71 273.5 199 66.8
DCAR_023373 Daucus carota HOM05D006827 ORTHO05D008725 4.1e-71 272.7 213 66.7
Nitab4.5_0004047g0010 Nicotiana tabacum HOM05D006827 ORTHO05D008725 4.1e-71 272.7 177 75.7
PGSC0003DMG400015968 Solanum tuberosum HOM05D006827 ORTHO05D008725 5.4e-71 272.3 198 69.7
Gohir.A10G174600 Gossypium hirsutum HOM05D006827 ORTHO05D008725 9.2e-71 271.6 199 66.8
Lsat_1_v5_gn_6_116121 Lactuca sativa HOM05D006827 ORTHO05D008725 7.8e-70 268.5 211 64.9
Gohir.D10G181100 Gossypium hirsutum HOM05D006827 ORTHO05D008725 1.7e-69 267.3 199 65.8
Hma1.2p1_0516F.1_g170510 Hydrangea macrophylla HOM05D006827 ORTHO05D008725 2.3e-69 266.9 225 63.1
Thecc.04G305900 Theobroma cacao HOM05D006827 ORTHO05D008725 3.0e-69 266.5 201 65.2
Ah.13g071520 Amaranthus hybridus HOM05D006827 ORTHO05D008725 8.6e-69 265.0 191 68.1
CAN.G281.10 Capsicum annuum HOM05D006827 ORTHO05D008725 8.6e-69 265.0 193 68.4
COL.COLO4_34569 Corchorus olitorius HOM05D001281 ORTHO05D001139 1.5e-68 264.2 190 66.3
BraA01t03774Z Brassica rapa HOM05D006827 ORTHO05D008725 2.5e-68 263.5 191 69.1
Manes.03G207700 Manihot esculenta HOM05D006827 ORTHO05D008725 3.3e-68 263.1 202 65.8
GSVIVG01034952001 Vitis vinifera HOM05D006827 ORTHO05D008725 3.3e-68 263.1 216 63.0
Aa31LG8G4170 Aethionema arabicum HOM05D006827 ORTHO05D008725 5.6e-68 262.3 200 66.5
HanXRQChr05g0148611 Helianthus annuus HOM05D006827 ORTHO05D008725 5.6e-68 262.3 221 62.9
Rhsim04G0242100 Rhododendron simsii HOM05D006827 ORTHO05D008725 7.3e-68 261.9 190 69.5
arahy.Tifrunner.gnm1.ann1.7T6EZL Arachis hypogaea HOM05D006827 ORTHO05D008725 1.2e-67 261.2 239 58.2
PSO210G0119 Papaver somniferum HOM05D006827 ORTHO05D008725 1.6e-67 260.8 212 61.8
PSO761G0463 Papaver somniferum HOM05D006827 ORTHO05D008725 2.1e-67 260.4 212 61.8
arahy.Tifrunner.gnm1.ann1.W8AIPN Arachis hypogaea HOM05D006827 ORTHO05D008725 2.8e-67 260.0 239 57.7
CiPaw.01G134600 Carya illinoinensis HOM05D006827 ORTHO05D008725 4.7e-67 259.2 232 61.2
Lj3A834T69 Lonicera japonica HOM05D006827 ORTHO05D008725 4.7e-67 259.2 182 70.3
Nn3g21791 Nelumbo nucifera HOM05D006827 ORTHO05D008725 6.2e-67 258.8 196 65.8
TAR365G1248 Trochodendron aralioides HOM05D006827 ORTHO05D008725 6.2e-67 258.8 209 65.1
TWI53G1816 Tripterygium wilfordii HOM05D006827 ORTHO05D008725 8.0e-67 258.5 227 59.5
BcaC09g48673 Brassica carinata HOM05D006827 ORTHO05D008725 1.1e-66 258.1 177 71.2
BcaC09g48674 Brassica carinata HOM05D006827 ORTHO05D008725 1.1e-66 258.1 177 71.2
C01p47070 Brassica napus HOM05D006827 ORTHO05D008725 1.1e-66 258.1 177 71.2
EL10Ac3g05552 Beta vulgaris HOM05D006827 ORTHO05D008725 1.4e-66 257.7 224 58.9
Duzib212G0426 Durio zibethinus HOM05D006827 ORTHO05D008725 1.4e-66 257.7 192 65.1
Sp3g15370 Schrenkiella parvula HOM05D006827 ORTHO05D008725 1.8e-66 257.3 191 67.5
BcaB04g20857 Brassica carinata HOM05D006827 ORTHO05D008725 3.1e-66 256.5 193 66.8
A01p37130 Brassica napus HOM05D006827 ORTHO05D008725 4.0e-66 256.1 175 71.4
CARHR092440 Cardamine hirsuta HOM05D006827 ORTHO05D008725 4.0e-66 256.1 196 64.8
BolC1t04673H Brassica oleracea HOM05D006827 ORTHO05D008725 5.2e-66 255.8 177 70.6
Cfa015277 Carpinus fangiana HOM05D006827 ORTHO05D008725 6.8e-66 255.4 233 60.5
AL3G30170 Arabidopsis lyrata HOM05D006827 ORTHO05D008725 1.2e-65 254.6 175 70.9
TWI09G0591 Tripterygium wilfordii HOM05D006827 ORTHO05D008725 1.2e-65 254.6 232 57.3
Carub.0003s1692 Capsella rubella HOM05D006827 ORTHO05D008725 1.5e-65 254.2 191 67.0
Ca_00959_v3 Cicer arietinum L. HOM05D006827 ORTHO05D008725 1.5e-65 254.2 183 66.7
ECA246G4663 Erigeron canadensis HOM05D002153 ORTHO05D002137 2.0e-65 253.8 176 71.0
Thhalv10021204m.g Eutrema salsugineum HOM05D006827 ORTHO05D008725 2.0e-65 253.8 170 71.2
Potri.008G101900 Populus trichocarpa HOM05D006827 ORTHO05D008725 5.8e-65 252.3 195 63.1
THA.LOC104820318 Tarenaya hassleriana HOM05D006827 ORTHO05D008725 5.8e-65 252.3 191 65.4
AT3G17170 Arabidopsis thaliana HOM05D006827 ORTHO05D008725 1.3e-64 251.1 173 69.9
AUR62016245 Chenopodium quinoa HOM05D002153 ORTHO05D002137 1.3e-64 251.1 229 56.3
QL06p013028 Quercus lobata HOM05D006827 ORTHO05D008725 1.3e-64 251.1 242 58.7
PGR031G1277 Punica granatum HOM05D006827 ORTHO05D008725 2.2e-64 250.4 181 70.2
Sed0009970 Sechium edule HOM05D006827 ORTHO05D008725 2.9e-64 250.0 183 68.9
ClCG06G004410 Citrullus lanatus HOM05D006827 ORTHO05D008725 3.7e-64 249.6 193 68.4
Sc25g0003190 Simmondsia chinensis HOM05D006827 ORTHO05D008725 6.4e-64 248.8 177 67.2
MBI18_g27379_MAGBIO Magnolia biondii HOM05D006827 ORTHO05D008725 8.3e-64 248.4 229 58.5
Medtr2g033490 Medicago truncatula HOM05D006827 ORTHO05D008725 8.3e-64 248.4 218 58.7
Hund11994 Selenicereus undatus HOM05D006827 ORTHO05D008725 1.9e-63 247.3 211 63.5
vmacro07963 Vaccinium macrocarpon HOM05D006827 ORTHO05D008725 1.9e-63 247.3 191 66.5
Glyma.09G032900 Glycine max HOM05D001281 ORTHO05D008725 4.1e-63 246.1 210 58.6
Glyma.15G137900 Glycine max HOM05D006827 ORTHO05D008725 4.1e-63 246.1 234 55.6
Eucgr.B03980 Eucalyptus grandis HOM05D006827 ORTHO05D008725 7.1e-63 245.4 192 64.6
Lj6g0001147 Lotus japonicus HOM05D001281 ORTHO05D001139 9.2e-63 245.0 206 60.7
MD13G1149000 Malus domestica HOM05D006827 ORTHO05D008725 1.6e-62 244.2 255 52.9
Aqoxy2G02656 Aquilegia oxysepala HOM05D006827 ORTHO05D008725 2.1e-62 243.8 211 61.6
CANSAT78G0077 Cannabis sativa HOM05D006827 ORTHO05D008725 4.6e-62 242.7 223 57.4
TPR.G33906 Trifolium pratense HOM05D006827 ORTHO05D008725 6.0e-62 242.3 184 63.0
FvH4_4g20660 Fragaria vesca HOM05D006827 ORTHO05D008725 7.8e-62 241.9 248 52.4
FAN12G3056 Fragaria x ananassa HOM05D006827 ORTHO05D008725 7.8e-62 241.9 248 52.4
Phvul.006G120200 Phaseolus vulgaris HOM05D006827 ORTHO05D008725 7.8e-62 241.9 212 57.5
arahy.Tifrunner.gnm1.ann1.GV6LK0 Arachis hypogaea HOM05D006827 ORTHO05D008725 3.9e-61 239.6 242 53.7
MELO3C021255.2 Cucumis melo HOM05D006827 ORTHO05D008725 3.9e-61 239.6 252 57.1
VMungo0540G1290 Vigna mungo HOM05D006827 ORTHO05D008725 1.1e-60 238.0 212 57.5
Haze_01351 Corylus avellana HOM05D002153 ORTHO05D002137 9.5e-60 235.0 280 51.1
ATR1120G107 Amborella trichopoda HOM05D006827 ORTHO05D008725 2.1e-59 233.8 187 62.0
Psat1g161800 Pisum sativum HOM05D006827 ORTHO05D008725 2.1e-59 233.8 167 65.9
FAN07G0118 Fragaria x ananassa HOM05D006827 ORTHO05D008725 2.8e-59 233.4 248 50.8
CAN.G582.1 Capsicum annuum HOM05D006827 ORTHO05D008725 3.6e-59 233.0 177 66.7
Prupe.1G113000 Prunus persica HOM05D006827 ORTHO05D008725 3.6e-59 233.0 255 50.6
HPP92_027958 Vanilla planifolia HOM05D006827 ORTHO05D008725 4.7e-59 232.6 195 60.0
Ciclev10005460m.g Citrus clementina HOM05D006827 ORTHO05D008725 6.2e-59 232.3 209 57.4
QL03p023650 Quercus lobata HOM05D006827 ORTHO05D008725 2.3e-58 230.3 285 49.5
Os12g0563200 Oryza sativa ssp. japonica HOM05D006827 ORTHO05D008725 6.8e-58 228.8 172 63.4
Sabra08G0077100 Salix brachista HOM05D006827 ORTHO05D007631 6.8e-58 228.8 184 60.9
Zm00001eb136900 Zea mays HOM05D006827 ORTHO05D008725 6.8e-58 228.8 208 55.8
Lalb_Chr18g0058551 Lupinus albus HOM05D006827 ORTHO05D008725 8.9e-58 228.4 179 62.0
RcHm_v2.0_Chr4g0426061 Rosa chinensis HOM05D006827 ORTHO05D008725 1.5e-57 227.6 246 52.8
Peaxi162Scf00228g00735 Petunia axillaris HOM05D006827 ORTHO05D008725 6.4e-56 222.2 208 56.7
CsaV3_UNG230110 Cucumis sativus L. HOM05D006827 ORTHO05D008725 7.8e-54 215.3 176 68.2
CsaV3_6G028440 Cucumis sativus L. HOM05D006827 ORTHO05D008725 1.4e-47 194.5 210 54.8
Atru.chr4.3069 Acer truncatum HOM05D006827 ORTHO05D008725 3.6e-43 179.9 118 74.6
Hma1.2p1_0013F.1_g008250 Hydrangea macrophylla HOM05D006827 ORTHO05D008725 7.1e-39 165.6 114 71.9
MD16G1149200 Malus domestica HOM05D006827 ORTHO05D008725 1.7e-37 161.0 174 50.0
arahy.Tifrunner.gnm1.ann1.25F6GK Arachis hypogaea HOM05D006827 ORTHO05D008725 1.7e-32 144.4 155 54.2
SEGI_22692 Sequoiadendron giganteum HOM05D006827 ORTHO05D008725 6.4e-32 142.5 111 63.1
Pp3c14_11410 Physcomitrium patens HOM05D006827 ORTHO05D008725 1.6e-30 137.9 154 45.5
Pp3c14_11414 Physcomitrium patens HOM05D006827 ORTHO05D008725 1.6e-30 137.9 154 45.5
Cpa.g.sc9.7 Carica papaya HOM05D001281 ORTHO05D008725 6.2e-27 125.9 153 50.3
Mapoly0005s0049 Marchantia polymorpha HOM05D006827 ORTHO05D008725 1.4e-26 124.8 158 41.1
AUR62032776 Chenopodium quinoa HOM05D006827 ORTHO05D008725 1.5e-25 121.3 103 56.3
CBR_g38487 Chara braunii HOM05D006827 ORTHO05D008725 9.3e-23 112.1 138 41.3
SMO351G0308 Selaginella moellendorffii HOM05D006827 ORTHO05D008725 7.9e-22 109.0 95 50.5
BcaC05g28821 Brassica carinata HOM05D006827 ORTHO05D023991 2.2e-16 90.9 97 53.6
Hma1.2p1_0013F.1_g008240 Hydrangea macrophylla HOM05D006827 ORTHO05D008725 6.5e-16 89.4 76 59.2
Psat7g189800 Pisum sativum HOM05D006827 ORTHO05D008725 5.5e-15 86.3 73 58.9
PRCOL_00004690 Prasinoderma coloniale HOM05D006827 ORTHO05D008725 1.8e-13 81.3 98 41.8
A05p32600 Brassica napus HOM05D006827 ORTHO05D008725 6.7e-13 79.3 79 57.0
BraA05t22084Z Brassica rapa HOM05D006827 ORTHO05D008725 6.7e-13 79.3 79 57.0
Zm00001eb028550 Zea mays HOM05D006608 ORTHO05D008316 2.8e-11 73.9 126 38.9
C05p49280 Brassica napus HOM05D006827 ORTHO05D008725 1.4e-10 71.6 87 47.1
Ca_29226_v3 Cicer arietinum L. HOM05D006252 ORTHO05D008725 7.2e-07 59.3 85 36.5
Psat4g040600 Pisum sativum HOM05D006827 ORTHO05D008725 2.7e-06 57.4 130 30.8


User provided reference genes

Program Settings