Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold225G43066 Striga asiatica HOM05D005833 ORTHO05D008135 0.0e+00 1747.3 904 100.0
Migut.N03019 Erythranthe guttata HOM05D005833 ORTHO05D008135 5.6e-263 911.4 822 61.9
MSTRG.22056 Avicennia marina HOM05D005833 ORTHO05D008135 5.6e-247 858.2 841 57.0
Dinv31936 Davidia involucrata HOM05D005833 ORTHO05D008135 6.5e-211 738.4 806 50.9
Thecc.08G058300 Theobroma cacao HOM05D005833 ORTHO05D008135 1.1e-205 721.1 830 47.0
Actinidia15488 Actinidia chinensis HOM05D005833 ORTHO05D008135 1.6e-204 717.2 824 47.8
GSVIVG01008674001 Vitis vinifera HOM05D005833 ORTHO05D008135 2.6e-204 716.5 816 48.2
Actinidia17037 Actinidia chinensis HOM05D005833 ORTHO05D008135 5.9e-204 715.3 819 48.7
QL02p014018 Quercus lobata HOM05D005833 ORTHO05D008135 2.7e-201 706.4 815 48.0
Rhsim06G0007700 Rhododendron simsii HOM05D005833 ORTHO05D008135 2.7e-201 706.4 776 50.0
Gorai.002G118000 Gossypium raimondii HOM05D005833 ORTHO05D008135 8.8e-200 701.4 776 50.0
Gohir.A01G106200 Gossypium hirsutum HOM05D005833 ORTHO05D008135 1.3e-198 697.6 776 47.7
Nitab4.5_0000588g0140 Nicotiana tabacum HOM05D005833 ORTHO05D008135 2.2e-198 696.8 808 48.3
PGSC0003DMG400009977 Solanum tuberosum HOM05D005833 ORTHO05D008135 1.8e-197 693.7 792 48.6
Sopen04g035940 Solanum pennellii HOM05D005833 ORTHO05D008135 1.3e-195 687.6 792 48.7
Solyc04g082320.3 Solanum lycopersicum HOM05D005833 ORTHO05D008135 2.9e-195 686.4 792 48.4
CSS0049151 Camellia sinensis var. sinensis HOM05D005833 ORTHO05D008135 5.0e-195 685.6 828 47.2
Haze_22762 Corylus avellana HOM05D005833 ORTHO05D008135 5.0e-195 685.6 832 46.4
CAN.G311.113 Capsicum annuum HOM05D005833 ORTHO05D008135 4.2e-194 682.6 795 48.8
Prupe.2G013700 Prunus persica HOM05D005833 ORTHO05D008135 7.2e-194 681.8 772 48.7
vmacro21814 Vaccinium macrocarpon HOM05D005833 ORTHO05D008135 9.4e-194 681.4 778 48.2
MD08G1002500 Malus domestica HOM05D005833 ORTHO05D008135 2.4e-189 666.8 834 45.8
TAR381G0753 Trochodendron aralioides HOM05D005833 ORTHO05D008135 1.6e-188 664.1 865 45.7
Potri.001G047200 Populus trichocarpa HOM05D005833 ORTHO05D008135 3.5e-188 662.9 816 46.2
Peaxi162Scf00893g00432 Petunia axillaris HOM05D005833 ORTHO05D008135 5.0e-187 659.1 763 47.8
Sc02g0009090 Simmondsia chinensis HOM05D005833 ORTHO05D008135 2.5e-186 656.8 782 46.3
Nn5g30935 Nelumbo nucifera HOM05D005833 ORTHO05D008135 4.2e-186 656.0 806 46.9
Cc01_g04490 Coffea canephora HOM05D005833 ORTHO05D008135 2.1e-185 653.7 769 49.8
Cpa.g.sc26.202 Carica papaya HOM05D005833 ORTHO05D008135 6.8e-184 648.7 763 46.1
Manes.01G079700 Manihot esculenta HOM05D005833 ORTHO05D008135 1.4e-181 641.0 831 47.1
CANSAT56G4366 Cannabis sativa HOM05D005833 ORTHO05D008135 7.0e-181 638.6 813 45.5
TWI38G0766 Tripterygium wilfordii HOM05D005833 ORTHO05D008135 1.2e-180 637.9 770 46.0
Ciclev10004328m.g Citrus clementina HOM05D005833 ORTHO05D008135 5.9e-180 635.6 807 45.6
Hma1.2p1_1100F.1_g257060 Hydrangea macrophylla HOM05D005833 ORTHO05D008135 3.8e-179 632.9 769 49.5
Ca_25244_v3 Cicer arietinum L. HOM05D005833 ORTHO05D008135 1.9e-178 630.6 769 46.3
Sabra01G0032600 Salix brachista HOM05D005833 ORTHO05D008135 4.3e-178 629.4 848 43.5
Psat6g000360 Pisum sativum HOM05D005833 ORTHO05D008135 4.0e-176 622.9 774 45.9
RcHm_v2.0_Chr6g0270441 Rosa chinensis HOM05D005833 ORTHO05D008135 1.2e-175 621.3 772 46.1
MELO3C023645.2 Cucumis melo HOM05D005833 ORTHO05D008135 2.6e-175 620.2 764 45.9
CsaV3_7G024400 Cucumis sativus L. HOM05D005833 ORTHO05D008135 2.9e-174 616.7 824 43.4
CiPaw.12G008600 Carya illinoinensis HOM05D005833 ORTHO05D008135 1.2e-172 611.3 770 45.8
Medtr6g069480 Medicago truncatula HOM05D005833 ORTHO05D008135 2.0e-172 610.5 772 44.6
AL2G36360 Arabidopsis lyrata HOM05D005833 ORTHO05D008135 7.8e-172 608.6 767 44.2
EL10Ac1g01971 Beta vulgaris HOM05D005833 ORTHO05D008135 7.8e-172 608.6 813 42.6
ClCG09G010280 Citrullus lanatus HOM05D005833 ORTHO05D008135 1.3e-171 607.8 812 42.5
Ah.11g041110 Amaranthus hybridus HOM05D005833 ORTHO05D008135 2.3e-171 607.1 772 44.9
Lalb_Chr19g0131751 Lupinus albus HOM05D005833 ORTHO05D008135 2.3e-171 607.1 782 44.9
THA.LOC104813754 Tarenaya hassleriana HOM05D005833 ORTHO05D008135 6.6e-171 605.5 763 44.4
MBI15_g24990_MAGBIO Magnolia biondii HOM05D005833 ORTHO05D008135 2.5e-170 603.6 932 41.1
A07p41850 Brassica napus HOM05D005833 ORTHO05D008135 1.4e-168 597.8 812 43.1
C06p50250 Brassica napus HOM05D005833 ORTHO05D008135 1.4e-168 597.8 768 44.7
HanXRQChr14g0428311 Helianthus annuus HOM05D005833 ORTHO05D008135 1.4e-168 597.8 769 43.6
SalBow6G3625 Salvia bowleyana HOM05D005833 ORTHO05D008135 1.8e-168 597.4 542 57.7
BolC6t40064H Brassica oleracea HOM05D005833 ORTHO05D008135 5.2e-168 595.9 768 44.4
Sp5g31420 Schrenkiella parvula HOM05D005833 ORTHO05D008135 1.2e-167 594.7 764 44.2
Carub.0002s2317 Capsella rubella HOM05D005833 ORTHO05D008135 2.6e-167 593.6 770 43.2
BraA07t31715Z Brassica rapa HOM05D005833 ORTHO05D008135 9.8e-167 591.7 812 42.6
VMungo0647G1167 Vigna mungo HOM05D005833 ORTHO05D008135 6.4e-166 589.0 758 45.4
FvH4_2g37510 Fragaria vesca HOM05D005833 ORTHO05D008135 1.1e-165 588.2 778 44.1
AUR62043177 Chenopodium quinoa HOM05D005833 ORTHO05D008135 1.0e-163 581.6 846 40.9
Lj8C590T1 Lonicera japonica HOM05D005833 ORTHO05D008135 1.7e-163 580.9 735 44.8
ECA238G3879 Erigeron canadensis HOM05D005833 ORTHO05D008135 6.6e-163 578.9 742 43.4
Hma1.2p1_1100F.1_g257040 Hydrangea macrophylla HOM05D005833 ORTHO05D008135 8.6e-163 578.6 632 50.8
Thhalv10018138m.g Eutrema salsugineum HOM05D005833 ORTHO05D008135 1.1e-162 578.2 765 43.1
Lj2g0014489 Lotus japonicus HOM05D005833 ORTHO05D008135 1.1e-162 578.2 801 42.2
Aa31LG4G6370 Aethionema arabicum HOM05D005833 ORTHO05D008135 1.5e-162 577.8 782 43.1
FAN27G2717 Fragaria x ananassa HOM05D005833 ORTHO05D008135 2.5e-162 577.0 768 43.1
Lsat_1_v5_gn_2_5021 Lactuca sativa HOM05D005833 ORTHO05D008135 5.6e-162 575.9 808 42.7
SHI22388 Sapria himalayana HOM05D005833 ORTHO05D008135 9.5e-162 575.1 807 41.9
RcHm_v2.0_Chr6g0304231 Rosa chinensis HOM05D005833 ORTHO05D008135 6.2e-161 572.4 773 43.2
arahy.Tifrunner.gnm1.ann1.5KXZ1H Arachis hypogaea HOM05D005833 ORTHO05D008135 2.0e-159 567.4 767 44.3
arahy.Tifrunner.gnm1.ann1.JP3Y8V Arachis hypogaea HOM05D005833 ORTHO05D008135 2.0e-159 567.4 767 44.3
Glyma.14G223300 Glycine max HOM05D005833 ORTHO05D008135 1.1e-157 561.6 795 45.0
PSO541G2949 Papaver somniferum HOM05D005833 ORTHO05D008135 4.6e-156 556.2 812 42.9
CDE09G0025 Ceratophyllum demersum HOM05D005833 ORTHO05D008135 5.1e-155 552.7 844 40.9
FAN15G1206 Fragaria x ananassa HOM05D005833 ORTHO05D008135 6.2e-153 545.8 776 42.3
PSO675G2737 Papaver somniferum HOM05D005833 ORTHO05D008135 6.2e-153 545.8 813 42.7
TPR.G6767 Trifolium pratense HOM05D005833 ORTHO05D008135 6.2e-153 545.8 721 44.1
Gohir.D01G092700 Gossypium hirsutum HOM05D005833 ORTHO05D008135 1.2e-148 531.6 543 50.6
Zm00001eb315840 Zea mays HOM05D005833 ORTHO05D008135 1.2e-148 531.6 780 40.9
Phvul.001G001200 Phaseolus vulgaris HOM05D005833 ORTHO05D008135 1.0e-147 528.5 758 42.1
Sed0015348 Sechium edule HOM05D005833 ORTHO05D008135 2.5e-146 523.9 657 44.9
Aqoxy6G01299 Aquilegia oxysepala HOM05D005833 ORTHO05D008135 3.3e-146 523.5 858 39.6
PGR083G0966 Punica granatum HOM05D005833 ORTHO05D008135 4.0e-144 516.5 801 40.9
BcaNung02801 Brassica carinata HOM05D005833 ORTHO05D008135 1.5e-143 514.6 702 43.3
ATR0691G240 Amborella trichopoda HOM05D005833 ORTHO05D008135 2.9e-142 510.4 841 38.2
AT1G76280 Arabidopsis thaliana HOM05D005833 ORTHO05D008135 2.4e-136 490.7 600 44.2
unitig_699.g19597 Utricularia gibba HOM05D005833 ORTHO05D008135 5.4e-133 479.6 605 45.1
DCAR_009531 Daucus carota HOM05D004428 ORTHO05D006381 7.1e-133 479.2 619 44.1
BcaC08g47270 Brassica carinata HOM05D005833 ORTHO05D008135 1.0e-131 475.3 600 45.2
Eucgr.F01756 Eucalyptus grandis HOM05D005833 ORTHO05D008135 9.6e-130 468.8 633 43.8
HPP92_008490 Vanilla planifolia HOM05D005833 ORTHO05D008135 6.2e-129 466.1 836 35.6
CARHR069840 Cardamine hirsuta HOM05D005833 ORTHO05D008135 7.6e-127 459.1 614 43.6
FAN20G1756 Fragaria x ananassa HOM05D005833 ORTHO05D008135 6.4e-126 456.1 638 43.6
SEGI_05799 Sequoiadendron giganteum HOM05D005833 ORTHO05D008135 1.1e-122 445.3 792 35.6
AUR62036881 Chenopodium quinoa HOM05D005833 ORTHO05D008135 1.7e-97 361.7 547 38.9
BcaC08g47127 Brassica carinata HOM05D005833 ORTHO05D008135 7.0e-88 329.7 461 40.1
BcaC09g51226 Brassica carinata HOM05D005833 ORTHO05D008135 8.0e-84 316.2 634 34.9
TPR.G8628 Trifolium pratense HOM05D005833 ORTHO05D008135 5.3e-80 303.5 356 47.8
COL.COLO4_04005 Corchorus olitorius HOM05D005833 ORTHO05D008135 2.2e-49 201.8 354 37.3
CAN.G643.17 Capsicum annuum HOM05D005833 ORTHO05D008135 2.9e-49 201.4 419 34.4
Glyma.14G222150 Glycine max HOM05D005833 ORTHO05D008135 8.3e-49 199.9 214 51.4
TPR.G8631 Trifolium pratense HOM05D005833 ORTHO05D008135 1.9e-48 198.7 329 37.7
BcaC08g47126 Brassica carinata HOM05D005833 ORTHO05D008135 4.3e-45 187.6 261 43.3
Lj8P589T22 Lonicera japonica HOM05D005833 ORTHO05D008135 6.8e-43 180.3 150 60.7
SMO230G0024 Selaginella moellendorffii HOM05D005833 ORTHO05D008135 1.2e-42 179.5 557 26.0
AagrBONN_evm.TU.Sc2ySwM_117.1478 Anthoceros agrestis HOM05D005833 ORTHO05D008135 1.0e-38 166.4 469 27.9
Oeu011332.1 Olea europaea HOM05D005833 ORTHO05D008135 1.0e-38 166.4 131 66.4
Oeu011333.1 Olea europaea HOM05D005833 ORTHO05D008135 1.0e-38 166.4 131 66.4
CBR_g11913 Chara braunii HOM05D005833 ORTHO05D008135 1.3e-38 166.0 625 23.7
Nitab4.5_0000198g0010 Nicotiana tabacum HOM05D005833 ORTHO05D008135 1.5e-37 162.5 130 66.2
Pp3c11_2930 Physcomitrium patens HOM05D005833 ORTHO05D008135 2.4e-35 155.2 716 25.8
Mapoly0009s0070 Marchantia polymorpha HOM05D005833 ORTHO05D008135 1.7e-33 149.1 599 24.5
Medtr1g026340 Medicago truncatula HOM05D005833 ORTHO05D008135 5.8e-26 124.0 151 42.4
Medtr1g026460 Medicago truncatula HOM05D005833 ORTHO05D008135 5.8e-26 124.0 151 42.4
BcaC08g47271 Brassica carinata HOM05D005833 ORTHO05D008135 2.1e-23 115.5 117 51.3
Medtr1g026480 Medicago truncatula HOM05D005833 ORTHO05D008135 6.0e-23 114.0 111 53.2
DCAR_009530 Daucus carota HOM05D005833 ORTHO05D008135 5.6e-21 107.5 122 50.0
Lj5g0006874 Lotus japonicus HOM05D005833 ORTHO05D008135 2.9e-17 95.1 87 51.7
TPR.G8633 Trifolium pratense HOM05D005833 ORTHO05D008135 4.2e-16 91.3 93 45.2
BcaB05g24986 Brassica carinata HOM05D005833 ORTHO05D008135 2.6e-10 72.0 75 50.7
CAN.G772.6 Capsicum annuum HOM05D005833 ORTHO05D008135 2.6e-10 72.0 78 52.6
BcaC09g51225 Brassica carinata HOM05D005833 ORTHO05D008135 8.4e-09 67.0 69 52.2
Lsat_1_v5_gn_8_47340 Lactuca sativa HOM05D003889 ORTHO05D002785 1.4e-08 66.2 138 32.6
Lsat_1_v5_gn_5_40941 Lactuca sativa HOM05D002610 ORTHO05D011576 1.6e-07 62.8 105 32.4
Lsat_1_v5_gn_4_134881 Lactuca sativa HOM05D005833 ORTHO05D011576 2.1e-07 62.4 54 51.9
Lsat_1_v5_gn_3_133181 Lactuca sativa HOM05D003297 ORTHO05D004027 2.7e-07 62.0 53 50.9
Lsat_1_v5_gn_5_162860 Lactuca sativa HOM05D001044 ORTHO05D006993 3.5e-07 61.6 53 50.9
HanXRQChr03g0090051 Helianthus annuus HOM05D002785 ORTHO05D003042 6.0e-07 60.8 163 24.5
Lsat_1_v5_gn_0_21360 Lactuca sativa HOM05D001049 ORTHO05D015148 6.0e-07 60.8 60 46.7
Lsat_1_v5_gn_8_149561 Lactuca sativa HOM05D005833 ORTHO05D011576 6.0e-07 60.8 54 50.0
Lsat_1_v5_gn_2_68420 Lactuca sativa HOM05D005833 ORTHO05D011576 7.9e-07 60.5 54 51.9
Lsat_1_v5_gn_5_86001 Lactuca sativa HOM05D005833 ORTHO05D011576 7.9e-07 60.5 54 50.0
Lsat_1_v5_gn_1_129260 Lactuca sativa HOM05D005833 ORTHO05D011576 1.0e-06 60.1 52 51.9
Lsat_1_v5_gn_4_72121 Lactuca sativa HOM05D018531 ORTHO05D011576 1.0e-06 60.1 54 50.0
Lsat_1_v5_gn_5_140921 Lactuca sativa HOM05D000200 ORTHO05D000262 1.0e-06 60.1 51 49.0
Lsat_1_v5_gn_7_13280 Lactuca sativa HOM05D002352 ORTHO05D000385 1.0e-06 60.1 49 53.1
Lsat_1_v5_gn_7_70041 Lactuca sativa HOM05D018531 ORTHO05D011576 1.0e-06 60.1 49 53.1
THA.LOC104802670 Tarenaya hassleriana HOM05D001779 ORTHO05D001753 1.0e-06 60.1 111 23.4
DCAR_004720 Daucus carota HOM05D001779 ORTHO05D001753 1.3e-06 59.7 111 26.1
Lsat_1_v5_gn_9_66700 Lactuca sativa HOM05D029873 ORTHO05D011576 1.3e-06 59.7 55 47.3
Lsat_1_v5_gn_5_130920 Lactuca sativa HOM05D001159 ORTHO05D011576 1.8e-06 59.3 54 48.1
Lsat_1_v5_gn_8_89800 Lactuca sativa HOM05D001779 ORTHO05D001753 1.8e-06 59.3 111 23.4
MELO3C021027.2 Cucumis melo HOM05D001779 ORTHO05D001753 2.3e-06 58.9 132 25.0
Lsat_1_v5_gn_0_17581 Lactuca sativa HOM05D000524 ORTHO05D011576 2.3e-06 58.9 50 50.0
Lsat_1_v5_gn_4_20761 Lactuca sativa HOM05D002313 ORTHO05D014289 2.3e-06 58.9 54 48.1
Lsat_1_v5_gn_4_21621 Lactuca sativa HOM05D000942 ORTHO05D011576 2.3e-06 58.9 54 48.1
Lsat_1_v5_gn_7_11541 Lactuca sativa HOM05D002548 ORTHO05D011576 2.3e-06 58.9 54 48.1
Lsat_1_v5_gn_3_55481 Lactuca sativa HOM05D002352 ORTHO05D011576 3.0e-06 58.5 49 51.0
Lsat_1_v5_gn_9_108561 Lactuca sativa HOM05D018531 ORTHO05D011576 3.0e-06 58.5 54 48.1
MD10G1163400 Malus domestica HOM05D001779 ORTHO05D001753 3.0e-06 58.5 168 24.4
Lsat_1_v5_gn_1_92720 Lactuca sativa HOM05D001336 ORTHO05D011576 3.9e-06 58.2 52 50.0
Lsat_1_v5_gn_7_52861 Lactuca sativa HOM05D002548 ORTHO05D011576 3.9e-06 58.2 54 46.3
Lsat_1_v5_gn_1_98620 Lactuca sativa HOM05D003297 ORTHO05D011576 5.1e-06 57.8 49 49.0
Lsat_1_v5_gn_6_70320 Lactuca sativa HOM05D001049 ORTHO05D015148 5.1e-06 57.8 54 50.0
Duzib138G0054 Durio zibethinus HOM05D001779 ORTHO05D001753 6.7e-06 57.4 160 22.5
Lsat_1_v5_gn_1_102621 Lactuca sativa HOM05D018531 ORTHO05D011576 6.7e-06 57.4 49 49.0
Prupe.8G201700 Prunus persica HOM05D001779 ORTHO05D001753 6.7e-06 57.4 111 25.2
Cfa002578 Carpinus fangiana HOM05D001779 ORTHO05D001753 8.7e-06 57.0 111 24.3
Lsat_1_v5_gn_1_119700 Lactuca sativa HOM05D006671 ORTHO05D011576 8.7e-06 57.0 64 43.8


User provided reference genes

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