Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold222G42760 Striga asiatica HOM05D006383 ORTHO05D007815 0.0e+00 1337.4 659 100.0
Migut.L01608 Erythranthe guttata HOM05D006383 ORTHO05D007815 6.3e-248 860.9 548 78.1
Lj8A304T42 Lonicera japonica HOM05D006383 ORTHO05D007815 1.5e-225 786.6 578 66.8
Nn1g08377 Nelumbo nucifera HOM05D006383 ORTHO05D007815 3.2e-223 778.9 555 68.5
Actinidia07537 Actinidia chinensis HOM05D006383 ORTHO05D007815 1.3e-221 773.5 547 68.7
HanXRQChr10g0309251 Helianthus annuus HOM05D006383 ORTHO05D007815 2.3e-221 772.7 554 70.6
TAR317G0001 Trochodendron aralioides HOM05D006383 ORTHO05D007815 6.6e-221 771.2 557 68.6
Glyma.01G231700 Glycine max HOM05D006383 ORTHO05D007815 7.3e-220 767.7 555 67.6
Duzib248G1218 Durio zibethinus HOM05D006383 ORTHO05D007815 9.5e-220 767.3 547 67.6
Solyc01g056340.4 Solanum lycopersicum HOM05D006383 ORTHO05D007815 4.7e-219 765.0 549 68.1
ECA234G1746 Erigeron canadensis HOM05D006383 ORTHO05D007815 2.0e-217 759.6 559 68.0
Glyma.11G014600 Glycine max HOM05D006383 ORTHO05D007815 2.0e-217 759.6 555 67.0
GSVIVG01027490001 Vitis vinifera HOM05D006383 ORTHO05D007815 5.8e-217 758.1 554 67.9
Lsat_1_v5_gn_5_82200 Lactuca sativa HOM05D006383 ORTHO05D007815 9.9e-217 757.3 554 68.4
LjContig00222g0014398 Lotus japonicus HOM05D006383 ORTHO05D007815 1.7e-216 756.5 547 67.1
Prupe.2G049900 Prunus persica HOM05D006383 ORTHO05D007815 1.4e-215 753.4 555 67.6
QL10p065235 Quercus lobata HOM05D006383 ORTHO05D007815 2.4e-215 752.7 615 61.3
TPR.G38040 Trifolium pratense HOM05D006383 ORTHO05D007815 2.4e-215 752.7 553 66.2
Medtr5g008710 Medicago truncatula HOM05D006383 ORTHO05D007815 4.1e-215 751.9 553 67.1
DCAR_020439 Daucus carota HOM05D006383 ORTHO05D007815 5.4e-215 751.5 560 67.5
VMungo1215G1626 Vigna mungo HOM05D006383 ORTHO05D007815 5.4e-215 751.5 548 67.0
CAN.G40.1 Capsicum annuum HOM05D006383 ORTHO05D007815 9.2e-215 750.7 557 66.1
Psat2g186800 Pisum sativum HOM05D006383 ORTHO05D007815 1.2e-214 750.4 553 65.8
Atru.chr4.4 Acer truncatum HOM05D006383 ORTHO05D007815 2.1e-214 749.6 554 65.9
Potri.013G161700 Populus trichocarpa HOM05D006383 ORTHO05D007815 3.9e-213 745.3 555 65.9
Manes.15G189200 Manihot esculenta HOM05D006383 ORTHO05D007815 1.5e-212 743.4 554 64.8
Hma1.2p1_0122F.1_g057520 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 1.9e-212 743.0 549 67.9
Phvul.002G035400 Phaseolus vulgaris HOM05D006383 ORTHO05D007815 4.3e-212 741.9 555 65.6
TWI79G0526 Tripterygium wilfordii HOM05D006383 ORTHO05D007815 7.3e-212 741.1 555 65.4
SalBow3G0737 Salvia bowleyana HOM05D006383 ORTHO05D007815 1.6e-211 740.0 588 64.8
SalBow5G2916 Salvia bowleyana HOM05D006383 ORTHO05D007815 1.6e-211 740.0 588 64.8
Haze_11088 Corylus avellana HOM05D006383 ORTHO05D007815 3.6e-211 738.8 562 64.6
RcHm_v2.0_Chr1g0329651 Rosa chinensis HOM05D006383 ORTHO05D007815 8.9e-210 734.2 547 67.1
ClCG05G002590 Citrullus lanatus HOM05D006383 ORTHO05D007815 2.4e-207 726.1 552 65.0
MELO3C006225.2 Cucumis melo HOM05D006383 ORTHO05D007815 1.6e-206 723.4 557 64.5
Cfa008544 Carpinus fangiana HOM05D006383 ORTHO05D007815 7.8e-206 721.1 555 64.7
PSO782G2360 Papaver somniferum HOM05D006383 ORTHO05D007815 2.3e-205 719.5 547 65.4
Oeu021235.1 Olea europaea HOM05D006383 ORTHO05D007815 6.6e-205 718.0 553 67.5
FAN10G0291 Fragaria x ananassa HOM05D006383 ORTHO05D007815 1.1e-204 717.2 549 66.3
Gorai.012G136900 Gossypium raimondii HOM05D006383 ORTHO05D007815 1.5e-204 716.8 547 65.1
Gohir.D04G150300 Gossypium hirsutum HOM05D006383 ORTHO05D007815 4.3e-204 715.3 547 65.1
Sed0006461 Sechium edule HOM05D006383 ORTHO05D007815 7.3e-204 714.5 552 63.9
Peaxi162Scf00005g01511 Petunia axillaris HOM05D006383 ORTHO05D007815 2.1e-203 713.0 582 62.2
CSS0026217 Camellia sinensis var. sinensis HOM05D006383 ORTHO05D007815 4.0e-202 708.8 548 65.1
Eucgr.E01781 Eucalyptus grandis HOM05D006383 ORTHO05D007815 4.0e-202 708.8 553 64.9
unitig_8.g3541 Utricularia gibba HOM05D006383 ORTHO05D007815 1.5e-201 706.8 512 68.8
Gohir.A04G110100 Gossypium hirsutum HOM05D006383 ORTHO05D007815 2.0e-201 706.4 547 64.2
CiPaw.02G126400 Carya illinoinensis HOM05D006383 ORTHO05D007815 2.6e-201 706.1 553 64.6
FAN03G2677 Fragaria x ananassa HOM05D006383 ORTHO05D007815 2.6e-201 706.1 554 65.2
CDE09G0807 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 4.4e-201 705.3 548 62.6
THA.LOC104813077 Tarenaya hassleriana HOM05D006383 ORTHO05D007815 1.3e-200 703.7 561 62.6
Hund03213 Selenicereus undatus HOM05D006383 ORTHO05D007815 1.4e-199 700.3 549 64.3
Sc26g0001410 Simmondsia chinensis HOM05D006383 ORTHO05D007815 5.4e-199 698.4 554 63.5
CANSAT01G2053 Cannabis sativa HOM05D006383 ORTHO05D007815 6.0e-198 694.9 548 63.1
MD02G1269900 Malus domestica HOM05D006383 ORTHO05D007815 1.3e-197 693.7 548 63.5
Aqoxy1G01561 Aquilegia oxysepala HOM05D006383 ORTHO05D007815 1.7e-197 693.3 552 62.5
Sp6g07220 Schrenkiella parvula HOM05D006383 ORTHO05D007815 3.9e-197 692.2 558 62.4
Lalb_Chr05g0211431 Lupinus albus HOM05D006383 ORTHO05D007815 1.1e-196 690.6 513 66.3
BcaB01g02763 Brassica carinata HOM05D006383 ORTHO05D007815 1.5e-196 690.3 555 62.3
Thhalv10028566m.g Eutrema salsugineum HOM05D006383 ORTHO05D007815 3.3e-196 689.1 558 62.2
BcaC01g04690 Brassica carinata HOM05D006383 ORTHO05D007815 9.6e-196 687.6 557 61.9
BolC3t15801H Brassica oleracea HOM05D006383 ORTHO05D007815 1.3e-195 687.2 557 61.9
C03p34900 Brassica napus HOM05D006383 ORTHO05D007815 2.1e-195 686.4 557 61.8
AL6G44030 Arabidopsis lyrata HOM05D006383 ORTHO05D007815 4.8e-195 685.3 561 61.7
AT4G10180 Arabidopsis thaliana HOM05D006383 ORTHO05D007815 2.4e-194 682.9 561 61.9
A03p28870 Brassica napus HOM05D006383 ORTHO05D007815 5.3e-194 681.8 557 61.2
PSO063G0245 Papaver somniferum HOM05D006383 ORTHO05D007815 7.6e-193 677.9 547 62.7
Os01g0104600 Oryza sativa ssp. japonica HOM05D006383 ORTHO05D007815 2.2e-192 676.4 546 61.7
BraA03t12085Z Brassica rapa HOM05D006383 ORTHO05D007815 2.9e-192 676.0 557 61.0
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 1.1e-191 674.1 480 68.1
Carub.0006s2874 Capsella rubella HOM05D006383 ORTHO05D007815 4.2e-191 672.2 560 60.5
CARHR256640 Cardamine hirsuta HOM05D006383 ORTHO05D007815 1.6e-190 670.2 563 60.4
Sabra13G0129300 Salix brachista HOM05D006383 ORTHO05D007815 8.7e-189 664.5 614 56.5
Aa31LG9G11770 Aethionema arabicum HOM05D006383 ORTHO05D007815 8.1e-187 657.9 549 60.3
Zm00001eb317230 Zea mays HOM05D006383 ORTHO05D007815 3.8e-184 649.0 546 60.8
PGR042G0734 Punica granatum HOM05D006383 ORTHO05D007815 4.9e-184 648.7 547 60.0
Zm00001eb341540 Zea mays HOM05D006383 ORTHO05D007815 3.2e-183 646.0 546 60.1
ATR0620G042 Amborella trichopoda HOM05D006383 ORTHO05D007815 3.3e-180 636.0 520 61.3
Thecc.02G151200 Theobroma cacao HOM05D006383 ORTHO05D007815 1.3e-176 624.0 450 68.7
FAN01G1101 Fragaria x ananassa HOM05D006383 ORTHO05D007815 2.9e-176 622.9 610 55.7
Ciclev10015119m.g Citrus clementina HOM05D006383 ORTHO05D007815 7.1e-175 618.2 489 64.0
FAN06G4711 Fragaria x ananassa HOM05D006383 ORTHO05D007815 3.3e-172 609.4 549 58.3
Nitab4.5_0007118g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 1.8e-170 603.6 617 52.8
EL10Ac3g06365 Beta vulgaris HOM05D006383 ORTHO05D007815 1.0e-168 597.8 667 48.6
CsaV3_3G010030 Cucumis sativus L. HOM05D006383 ORTHO05D007815 1.9e-167 593.6 460 65.0
FvH4_7g04420 Fragaria vesca HOM05D006383 ORTHO05D007815 4.2e-167 592.4 478 63.4
CiPaw.01G204500 Carya illinoinensis HOM05D006383 ORTHO05D007815 1.0e-152 544.7 424 65.1
SMO351G0573 Selaginella moellendorffii HOM05D006383 ORTHO05D007815 5.5e-151 538.9 550 50.7
Ah.07g203930 Amaranthus hybridus HOM05D000443 ORTHO05D001278 9.4e-151 538.1 547 51.7
AUR62030094 Chenopodium quinoa HOM05D006383 ORTHO05D007815 7.4e-148 528.5 549 51.0
HPP92_027515 Vanilla planifolia HOM05D006383 ORTHO05D007815 1.9e-143 513.8 508 53.1
Ca_24479_v3 Cicer arietinum L. HOM05D006383 ORTHO05D007815 3.6e-142 509.6 461 57.7
Dinv26644 Davidia involucrata HOM05D006383 ORTHO05D007815 8.8e-141 505.0 338 71.3
Hma1.2p1_0122F.1_g057530 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 5.0e-128 462.6 357 65.8
SHI24488 Sapria himalayana HOM05D006383 ORTHO05D007815 1.4e-122 444.5 527 47.4
Nitab4.5_0021341g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 1.3e-120 438.0 295 70.5
Rhsim01G0101600 Rhododendron simsii HOM05D006383 ORTHO05D007815 3.7e-115 419.9 311 65.3
Pp3c21_10400 Physcomitrium patens HOM05D006383 ORTHO05D007815 4.3e-111 406.4 895 31.6
PGSC0003DMG400031459 Solanum tuberosum HOM05D006383 ORTHO05D007815 9.5e-111 405.2 278 69.1
AagrBONN_evm.TU.Sc2ySwM_228.1213 Anthoceros agrestis HOM05D006383 ORTHO05D007815 1.2e-110 404.8 989 30.6
Pp3c11_18250 Physcomitrium patens HOM05D006383 ORTHO05D007815 3.6e-110 403.3 857 32.8
HPP92_022397 Vanilla planifolia HOM05D006383 ORTHO05D007815 3.1e-109 400.2 382 55.2
Mapoly0064s0101 Marchantia polymorpha HOM05D006383 ORTHO05D007815 4.0e-109 399.8 977 30.0
Pp3c19_5540 Physcomitrium patens HOM05D006383 ORTHO05D007815 2.4e-106 390.6 903 31.3
Cc06_g23460 Coffea canephora HOM05D006383 ORTHO05D007815 2.3e-104 384.0 246 72.8
FAN06G0936 Fragaria x ananassa HOM05D006383 ORTHO05D007815 3.1e-101 373.6 299 63.2
ECA240G0013 Erigeron canadensis HOM05D006383 ORTHO05D007815 3.7e-99 366.7 341 57.5
Nitab4.5_0000075g0020 Nicotiana tabacum HOM05D006383 ORTHO05D007815 2.8e-94 350.5 252 69.4
HPP92_022268 Vanilla planifolia HOM05D006383 ORTHO05D007815 2.3e-80 304.3 278 56.8
vmacro20727 Vaccinium macrocarpon HOM05D006383 ORTHO05D007815 4.2e-74 283.5 188 73.4
Cpa.g.sc21.223 Carica papaya HOM05D006383 ORTHO05D007815 6.0e-65 253.1 170 71.8
CBR_g19443 Chara braunii HOM05D006383 ORTHO05D007815 2.2e-59 234.6 292 45.2
AUR62038212 Chenopodium quinoa HOM05D006383 ORTHO05D007815 2.9e-59 234.2 308 45.5
PRCOL_00006914 Prasinoderma coloniale HOM05D006383 ORTHO05D007815 2.1e-33 148.3 786 22.9
SEGI_12536 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 4.5e-28 130.6 147 49.0
Sopen01g020410 Solanum pennellii HOM05D006383 ORTHO05D007815 2.6e-23 114.8 77 71.4
Cre13.g571560 Chlamydomonas reinhardtii HOM05D006383 ORTHO05D007815 1.1e-21 109.4 259 29.7
Zm00001eb129170 Zea mays HOM05D006383 ORTHO05D007815 1.1e-18 99.4 129 44.2
Glyma.13G043200 Glycine max HOM05D006383 ORTHO05D007815 4.0e-16 90.9 73 61.6
CDE11G0182 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 2.2e-14 85.1 245 26.1
Zm00001eb417300 Zea mays HOM05D006383 ORTHO05D007815 6.3e-14 83.6 129 42.6
arahy.Tifrunner.gnm1.ann1.W6TY16 Arachis hypogaea HOM05D000199 ORTHO05D007815 6.6e-11 73.6 51 74.5
MCO10G269 Micromonas commoda HOM05D006383 ORTHO05D007815 4.3e-10 70.9 333 22.8
Actinidia02533 Actinidia chinensis HOM05D006383 ORTHO05D007815 8.9e-08 63.2 40 75.0
MBI11_g43687_MAGBIO Magnolia biondii HOM05D006383 ORTHO05D007815 9.8e-07 59.7 45 60.0


User provided reference genes

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