Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold21G09392 Striga asiatica HOM05D005251 ORTHO05D006680 1.0e-140 503.4 257 100.0
MSTRG.10560 Avicennia marina HOM05D005251 ORTHO05D006680 5.8e-56 221.9 117 88.9
Migut.L01497 Erythranthe guttata HOM05D005251 ORTHO05D006680 7.1e-54 214.9 117 87.2
TWI34G0442 Tripterygium wilfordii HOM05D005251 ORTHO05D006680 3.5e-53 212.6 121 83.5
GSVIVG01015197001 Vitis vinifera HOM05D005251 ORTHO05D006680 1.0e-52 211.1 117 82.9
CSS0048193 Camellia sinensis var. sinensis HOM05D005251 ORTHO05D006680 1.8e-52 210.3 117 83.8
Cc06_g11450 Coffea canephora HOM05D005251 ORTHO05D006680 1.8e-52 210.3 115 85.2
PGR142G3350 Punica granatum HOM05D005251 ORTHO05D006680 3.9e-52 209.1 117 83.8
Eucgr.C00887 Eucalyptus grandis HOM05D005251 ORTHO05D006680 1.5e-51 207.2 117 80.3
Manes.03G034200 Manihot esculenta HOM05D005251 ORTHO05D006680 2.5e-51 206.5 117 82.9
QL02p062545 Quercus lobata HOM05D005251 ORTHO05D006680 4.3e-51 205.7 117 80.3
Rhsim05G0020500 Rhododendron simsii HOM05D005251 ORTHO05D006680 9.6e-51 204.5 117 80.3
Actinidia39715 Actinidia chinensis HOM05D005251 ORTHO05D006680 1.3e-50 204.1 117 81.2
CSS0047543 Camellia sinensis var. sinensis HOM05D005251 ORTHO05D006680 1.6e-50 203.8 117 81.2
Haze_25916 Corylus avellana HOM05D005251 ORTHO05D006680 1.6e-50 203.8 117 79.5
Nn8g38856 Nelumbo nucifera HOM05D005251 ORTHO05D006680 1.6e-50 203.8 117 79.5
CiPaw.03G215300 Carya illinoinensis HOM05D005251 ORTHO05D006680 2.8e-50 203.0 117 79.5
HanXRQChr06g0178551 Helianthus annuus HOM05D005251 ORTHO05D006680 3.7e-50 202.6 117 77.8
Ciclev10010506m.g Citrus clementina HOM05D005251 ORTHO05D006680 6.2e-50 201.8 117 80.3
Potri.006G152100 Populus trichocarpa HOM05D005251 ORTHO05D006680 8.1e-50 201.4 120 80.0
Atru.BG.14.p Acer truncatum HOM05D005251 ORTHO05D006680 1.4e-49 200.7 116 78.4
COL.COLO4_18196 Corchorus olitorius HOM05D005251 ORTHO05D006680 1.4e-49 200.7 117 77.8
Dinv36771 Davidia involucrata HOM05D005251 ORTHO05D006680 1.4e-49 200.7 117 81.2
Sed0019984 Sechium edule HOM05D005251 ORTHO05D006680 1.4e-49 200.7 129 72.9
PGSC0003DMG400000278 Solanum tuberosum HOM05D005251 ORTHO05D006680 1.8e-49 200.3 117 78.6
TAR624G0724 Trochodendron aralioides HOM05D005251 ORTHO05D006680 2.4e-49 199.9 117 78.6
Lsat_1_v5_gn_8_87701 Lactuca sativa HOM05D005251 ORTHO05D006680 4.0e-49 199.1 129 73.6
THA.LOC104817759 Tarenaya hassleriana HOM05D005251 ORTHO05D006680 4.0e-49 199.1 115 79.1
Prupe.7G209200 Prunus persica HOM05D005251 ORTHO05D006680 5.3e-49 198.7 117 77.8
Gohir.D06G071400 Gossypium hirsutum HOM05D005251 ORTHO05D006680 6.9e-49 198.4 117 76.1
Gorai.010G083200 Gossypium raimondii HOM05D005251 ORTHO05D006680 6.9e-49 198.4 117 76.1
MELO3C015476.2 Cucumis melo HOM05D005251 ORTHO05D006680 9.0e-49 198.0 118 77.1
Thecc.09G088600 Theobroma cacao HOM05D005251 ORTHO05D006680 9.0e-49 198.0 118 77.1
Gohir.A06G072900 Gossypium hirsutum HOM05D005251 ORTHO05D006680 1.2e-48 197.6 117 76.1
Sopen12g003810 Solanum pennellii HOM05D005251 ORTHO05D006680 1.2e-48 197.6 117 77.8
arahy.Tifrunner.gnm1.ann1.Y01GTZ Arachis hypogaea HOM05D005251 ORTHO05D006680 2.0e-48 196.8 114 80.7
CsaV3_1G040480 Cucumis sativus L. HOM05D005251 ORTHO05D006680 2.0e-48 196.8 118 76.3
ECA232G2798 Erigeron canadensis HOM05D005251 ORTHO05D006680 2.0e-48 196.8 117 76.1
Thhalv10013022m.g Eutrema salsugineum HOM05D005251 ORTHO05D006680 2.6e-48 196.4 115 78.3
Sabra06G0120400 Salix brachista HOM05D005251 ORTHO05D006680 2.6e-48 196.4 121 77.7
Lj4g0006207 Lotus japonicus HOM05D005251 ORTHO05D006680 3.4e-48 196.1 115 80.0
arahy.Tifrunner.gnm1.ann1.V18GKH Arachis hypogaea HOM05D005251 ORTHO05D006680 4.5e-48 195.7 114 79.8
Ca_21279_v3 Cicer arietinum L. HOM05D005251 ORTHO05D006680 4.5e-48 195.7 115 80.9
Psat4g015200 Pisum sativum HOM05D005251 ORTHO05D006680 4.5e-48 195.7 115 80.9
Solyc12g008890.3 Solanum lycopersicum HOM05D005251 ORTHO05D006680 4.5e-48 195.7 117 76.9
unitig_8.g4690 Utricularia gibba HOM05D005251 ORTHO05D006680 4.5e-48 195.7 118 76.3
BcaB08g36046 Brassica carinata HOM05D005251 ORTHO05D006680 7.6e-48 194.9 115 77.4
Sc18g0002110 Simmondsia chinensis HOM05D005251 ORTHO05D006680 9.9e-48 194.5 117 79.5
CAN.G1241.24 Capsicum annuum HOM05D005251 ORTHO05D006680 1.3e-47 194.1 117 76.9
Glyma.17G054700 Glycine max HOM05D005251 ORTHO05D006680 1.3e-47 194.1 115 80.0
BcaC04g20043 Brassica carinata HOM05D005251 ORTHO05D006680 2.9e-47 193.0 115 76.5
C09p48540 Brassica napus HOM05D005251 ORTHO05D006680 2.9e-47 193.0 115 76.5
BolC9t57695H Brassica oleracea HOM05D005251 ORTHO05D006680 2.9e-47 193.0 115 76.5
Sp6g18620 Schrenkiella parvula HOM05D005251 ORTHO05D006680 2.9e-47 193.0 115 77.4
AT5G56900 Arabidopsis thaliana HOM05D005251 ORTHO05D006680 6.4e-47 191.8 115 76.5
RcHm_v2.0_Chr2g0093421 Rosa chinensis HOM05D005251 ORTHO05D006680 6.4e-47 191.8 117 75.2
PSO210G1153 Papaver somniferum HOM05D005251 ORTHO05D006680 1.1e-46 191.0 117 74.4
AL8G32750 Arabidopsis lyrata HOM05D005251 ORTHO05D006680 1.4e-46 190.7 115 75.7
A10p14170 Brassica napus HOM05D005251 ORTHO05D006680 3.2e-46 189.5 115 75.7
Cpa.g.sc61.41 Carica papaya HOM05D005251 ORTHO05D006680 3.2e-46 189.5 117 76.1
Duzib150G0576 Durio zibethinus HOM05D005251 ORTHO05D006680 3.2e-46 189.5 118 72.9
FAN19G0073 Fragaria x ananassa HOM05D005251 ORTHO05D006680 3.2e-46 189.5 117 73.5
Aa31LG3G12780 Aethionema arabicum HOM05D005251 ORTHO05D006680 4.2e-46 189.1 115 77.4
FvH4_1g07540 Fragaria vesca HOM05D005251 ORTHO05D006680 4.2e-46 189.1 117 73.5
FAN26G3339 Fragaria x ananassa HOM05D005251 ORTHO05D006680 4.2e-46 189.1 117 73.5
Phvul.003G136700 Phaseolus vulgaris HOM05D005251 ORTHO05D006680 5.5e-46 188.7 115 77.4
PSO210G7113 Papaver somniferum HOM05D005251 ORTHO05D006680 7.1e-46 188.3 117 73.5
FAN28G0072 Fragaria x ananassa HOM05D005251 ORTHO05D006680 9.3e-46 188.0 117 73.5
MD02G1080200 Malus domestica HOM05D005251 ORTHO05D006680 9.3e-46 188.0 118 74.6
Glyma.13G104400 Glycine max HOM05D005251 ORTHO05D006680 1.2e-45 187.6 121 75.2
FAN26G1479 Fragaria x ananassa HOM05D005251 ORTHO05D006680 2.7e-45 186.4 117 72.6
Carub.0008s1736 Capsella rubella HOM05D005251 ORTHO05D006680 3.5e-45 186.0 115 74.8
FAN23G1060 Fragaria x ananassa HOM05D005251 ORTHO05D006680 6.0e-45 185.3 117 72.6
Lalb_Chr12g0199801 Lupinus albus HOM05D005251 ORTHO05D006680 7.9e-45 184.9 117 74.4
Medtr4g126260 Medicago truncatula HOM05D005251 ORTHO05D006680 1.0e-44 184.5 116 76.7
HPP92_009143 Vanilla planifolia HOM05D005251 ORTHO05D006680 5.1e-44 182.2 117 70.9
Aqoxy7G04044 Aquilegia oxysepala HOM05D005251 ORTHO05D006680 8.7e-44 181.4 117 71.8
Ah.09g228240 Amaranthus hybridus HOM05D005251 ORTHO05D006680 4.3e-43 179.1 114 73.7
AUR62029068 Chenopodium quinoa HOM05D005251 ORTHO05D006680 4.3e-43 179.1 118 72.0
AUR62033961 Chenopodium quinoa HOM05D005251 ORTHO05D006680 9.6e-43 177.9 118 71.2
TPR.G9472 Trifolium pratense HOM05D005251 ORTHO05D006680 2.1e-42 176.8 131 68.7
EL10Ac8g19209 Beta vulgaris HOM05D005251 ORTHO05D006680 4.8e-42 175.6 114 74.6
Cfa003082 Carpinus fangiana HOM05D005251 ORTHO05D006680 2.4e-41 173.3 117 70.1
Oeu018416.2 Olea europaea HOM05D005251 ORTHO05D006680 2.4e-41 173.3 99 82.8
vmacro17242 Vaccinium macrocarpon HOM05D005251 ORTHO05D006680 4.5e-40 169.1 96 83.3
ATR0789G123 Amborella trichopoda HOM05D005251 ORTHO05D006680 2.9e-39 166.4 117 65.8
Lj4A303G24 Lonicera japonica HOM05D005251 ORTHO05D006680 1.1e-38 164.5 92 80.4
VMungo1215G2738 Vigna mungo HOM05D005251 ORTHO05D006680 4.2e-38 162.5 102 76.5
AagrBONN_evm.TU.Sc2ySwM_228.1764 Anthoceros agrestis HOM05D005251 ORTHO05D006680 4.6e-37 159.1 110 64.5
C09p50860 Brassica napus HOM05D005251 ORTHO05D006680 4.6e-37 159.1 98 73.5
ClCG03G015560 Citrullus lanatus HOM05D005251 ORTHO05D006680 1.3e-36 157.5 96 75.0
MBI04_g31157_MAGBIO Magnolia biondii HOM05D005251 ORTHO05D006680 2.5e-35 153.3 90 76.7
BraA10t43510Z Brassica rapa HOM05D005251 ORTHO05D006680 3.3e-35 152.9 133 56.4
MD15G1207700 Malus domestica HOM05D005251 ORTHO05D006680 1.1e-33 147.9 93 74.2
Mapoly0009s0116 Marchantia polymorpha HOM05D005251 ORTHO05D006680 1.4e-33 147.5 115 59.1
Pp3c16_14300 Physcomitrium patens HOM05D005251 ORTHO05D006680 1.0e-31 141.4 115 58.3
Os09g0364000 Oryza sativa ssp. japonica HOM05D005251 ORTHO05D006680 3.8e-31 139.4 119 59.7
SMO147G0126 Selaginella moellendorffii HOM05D005251 ORTHO05D006680 4.2e-30 136.0 117 53.8
SMO273G0018 Selaginella moellendorffii HOM05D005251 ORTHO05D006680 2.1e-29 133.7 116 53.4
CANSAT56G1459 Cannabis sativa HOM05D005251 ORTHO05D006680 1.2e-21 107.8 62 79.0
CBR_g54012 Chara braunii HOM05D005251 ORTHO05D006680 2.1e-21 107.1 112 54.5
PRCOL_00000275 Prasinoderma coloniale HOM05D005251 ORTHO05D006680 1.3e-15 87.8 121 41.3
BcaNung02827 Brassica carinata HOM05D005251 ORTHO05D006680 1.7e-15 87.4 55 72.7
BcaNung03955 Brassica carinata HOM05D005251 ORTHO05D006680 1.7e-15 87.4 55 72.7
Cre07.g338900 Chlamydomonas reinhardtii HOM05D005251 ORTHO05D006680 1.1e-14 84.7 96 44.8
BolC9t57946H Brassica oleracea HOM05D005251 ORTHO05D006680 7.9e-13 78.6 51 68.6
C06p07130 Brassica napus HOM05D005251 ORTHO05D006680 5.7e-11 72.4 41 75.6
MCO16G282 Micromonas commoda HOM05D005251 ORTHO05D006680 1.3e-10 71.2 109 39.4
SalBow5G3528 Salvia bowleyana HOM05D000147 ORTHO05D005311 1.3e-10 71.2 36 83.3
Actinidia25250 Actinidia chinensis HOM05D005251 ORTHO05D006680 7.0e-09 65.5 39 79.5
Solyc05g032650.3 Solanum lycopersicum HOM05D005251 ORTHO05D006680 1.6e-08 64.3 50 64.0
SGA_v2.0_scaffold51G18862 Striga asiatica HOM05D005251 ORTHO05D006680 2.5e-06 57.0 89 40.4
C07p41650 Brassica napus HOM05D005251 ORTHO05D019858 9.4e-06 55.1 39 64.1


User provided reference genes

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