Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold211G42151 Striga asiatica HOM05D009041 ORTHO05D010054 2.0e-112 409.1 197 100.0
SGA_v2.0_scaffold130G34321 Striga asiatica HOM05D009041 ORTHO05D010054 9.9e-56 220.7 105 95.2
SGA_v2.0_scaffold47G17570 Striga asiatica HOM05D009041 ORTHO05D010054 4.3e-43 178.7 140 62.9
SGA_v2.0_scaffold160G37740 Striga asiatica HOM05D009041 ORTHO05D010054 9.3e-38 161.0 133 56.4
SGA_v2.0_scaffold115G32155 Striga asiatica HOM05D009041 ORTHO05D010054 5.7e-35 151.8 140 52.9
SGA_v2.0_scaffold548G52852 Striga asiatica HOM05D009041 ORTHO05D010054 7.4e-35 151.4 134 54.5
SGA_v2.0_scaffold21G09437 Striga asiatica HOM05D009041 ORTHO05D010054 1.4e-33 147.1 115 56.5
SGA_v2.0_scaffold5G02531 Striga asiatica HOM05D009041 ORTHO05D010054 1.8e-33 146.7 130 53.8
SGA_v2.0_scaffold11G05825 Striga asiatica HOM05D009041 ORTHO05D010054 3.1e-33 146.0 130 53.8
SGA_v2.0_scaffold21G09336 Striga asiatica HOM05D009041 ORTHO05D010054 1.2e-32 144.1 130 53.8
SGA_v2.0_scaffold25G10890 Striga asiatica HOM05D009041 ORTHO05D010054 1.5e-32 143.7 134 56.0
SGA_v2.0_scaffold366G50039 Striga asiatica HOM05D009041 ORTHO05D010054 2.0e-32 143.3 116 55.2
SGA_v2.0_scaffold180G39666 Striga asiatica HOM05D000045 ORTHO05D010054 1.0e-31 141.0 112 58.9
SGA_v2.0_scaffold63G21825 Striga asiatica HOM05D009041 ORTHO05D010054 1.7e-31 140.2 109 58.7
SGA_v2.0_scaffold79G25579 Striga asiatica HOM05D009041 ORTHO05D010054 1.7e-31 140.2 114 56.1
SGA_v2.0_scaffold6G03390 Striga asiatica HOM05D009041 ORTHO05D010054 1.4e-30 137.1 118 55.9
SGA_v2.0_scaffold13G06721 Striga asiatica HOM05D009041 ORTHO05D010054 6.7e-28 128.3 110 50.9
SGA_v2.0_scaffold26G11342 Striga asiatica HOM05D009041 ORTHO05D010054 6.7e-28 128.3 110 50.9
SGA_v2.0_scaffold347G49563 Striga asiatica HOM05D009041 ORTHO05D010054 8.8e-28 127.9 112 52.7
SGA_v2.0_scaffold668G53413 Striga asiatica HOM05D009041 ORTHO05D010054 1.3e-26 124.0 92 60.9
SGA_v2.0_scaffold270G46313 Striga asiatica HOM05D009041 ORTHO05D010054 2.0e-24 116.7 92 58.7
SGA_v2.0_scaffold577G53016 Striga asiatica HOM05D009041 ORTHO05D010054 1.8e-20 103.6 91 53.8
SGA_v2.0_scaffold46G17333 Striga asiatica HOM05D009041 ORTHO05D010054 5.7e-19 98.6 70 58.6
SGA_v2.0_scaffold142G35653 Striga asiatica HOM05D009041 ORTHO05D010054 2.4e-17 93.2 97 44.3
SGA_v2.0_scaffold86G26862 Striga asiatica HOM05D000045 ORTHO05D010054 7.0e-17 91.7 107 43.9
SGA_v2.0_scaffold309G48184 Striga asiatica HOM05D014716 ORTHO05D010054 2.9e-15 86.3 103 38.8
SGA_v2.0_scaffold147G36271 Striga asiatica HOM05D009041 ORTHO05D010054 2.5e-14 83.2 100 42.0
EL10Ac5g11586 Beta vulgaris HOM05D000045 ORTHO05D000067 5.5e-14 82.0 201 27.9
SGA_v2.0_scaffold249G44954 Striga asiatica HOM05D009041 ORTHO05D010054 7.2e-14 81.6 64 56.2
SGA_v2.0_scaffold18G08321 Striga asiatica HOM05D009041 ORTHO05D010054 1.6e-13 80.5 63 52.4
EL10Ac9g21271 Beta vulgaris HOM05D000045 ORTHO05D010054 4.7e-13 79.0 117 36.8
SGA_v2.0_scaffold27G11549 Striga asiatica HOM05D009041 ORTHO05D010054 8.0e-13 78.2 102 41.2
EL10Ac8g19058 Beta vulgaris HOM05D000045 ORTHO05D010054 1.0e-12 77.8 153 34.0
EL10Ac5g11838 Beta vulgaris HOM05D000045 ORTHO05D010054 1.8e-12 77.0 149 34.9
EL10Ac5g12499 Beta vulgaris HOM05D000045 ORTHO05D000067 2.3e-12 76.6 116 33.6
EL10Ac8g19696 Beta vulgaris HOM05D000045 ORTHO05D000067 2.3e-12 76.6 116 33.6
SGA_v2.0_scaffold108G30934 Striga asiatica HOM05D000045 ORTHO05D010054 2.3e-12 76.6 104 39.4
TPR.G30322 Trifolium pratense HOM05D009041 ORTHO05D010054 2.3e-12 76.6 102 41.2
EL10Ac2g03825 Beta vulgaris HOM05D000045 ORTHO05D010054 3.0e-12 76.3 117 35.9
EL10Ac4g09061 Beta vulgaris HOM05D010653 ORTHO05D013151 3.0e-12 76.3 117 35.9
EL10Ac6g15511 Beta vulgaris HOM05D000045 ORTHO05D010054 3.0e-12 76.3 117 35.9
EL10Ac8g19823 Beta vulgaris HOM05D000045 ORTHO05D010054 3.0e-12 76.3 117 35.9
EL10Ac9g22734 Beta vulgaris HOM05D000045 ORTHO05D010054 3.0e-12 76.3 117 35.9
EL10Ac2g02717 Beta vulgaris HOM05D000045 ORTHO05D000067 3.9e-12 75.9 116 33.6
EL10Ac3g06581 Beta vulgaris HOM05D000045 ORTHO05D000067 3.9e-12 75.9 116 33.6
EL10Ac6g13792 Beta vulgaris HOM05D000045 ORTHO05D000067 3.9e-12 75.9 116 33.6
EL10Ac6g13927 Beta vulgaris HOM05D000045 ORTHO05D010054 3.9e-12 75.9 105 40.0
EL10As3g23329 Beta vulgaris HOM05D000045 ORTHO05D000067 3.9e-12 75.9 116 33.6
EL10Ac2g03240 Beta vulgaris HOM05D000045 ORTHO05D000695 5.2e-12 75.5 105 40.0
EL10Ac4g08127 Beta vulgaris HOM05D000045 ORTHO05D000067 5.2e-12 75.5 105 40.0
EL10Ac1g02190 Beta vulgaris HOM05D000045 ORTHO05D010054 8.8e-12 74.7 117 35.0
EL10Ac4g08128 Beta vulgaris HOM05D000045 ORTHO05D000067 8.8e-12 74.7 105 40.0
EL10Ac4g09892 Beta vulgaris HOM05D000045 ORTHO05D000067 8.8e-12 74.7 105 40.0
EL10Ac5g11529 Beta vulgaris HOM05D000045 ORTHO05D000067 8.8e-12 74.7 105 40.0
EL10Ac6g14806 Beta vulgaris HOM05D000045 ORTHO05D000067 8.8e-12 74.7 116 32.8
EL10Ac8g19517 Beta vulgaris HOM05D000045 ORTHO05D010054 8.8e-12 74.7 152 35.5
AUR62030095 Chenopodium quinoa HOM05D009508 ORTHO05D000695 1.1e-11 74.3 198 27.8
EL10Ac1g01865 Beta vulgaris HOM05D000045 ORTHO05D010054 3.3e-11 72.8 118 34.7
EL10Ac1g01956 Beta vulgaris HOM05D000045 ORTHO05D010054 3.3e-11 72.8 105 39.0
EL10Ac1g01998 Beta vulgaris HOM05D000045 ORTHO05D010054 1.7e-10 70.5 138 31.2
EL10Ac9g21079 Beta vulgaris HOM05D000045 ORTHO05D000695 2.8e-10 69.7 108 38.0
TPR.G33858 Trifolium pratense HOM05D001572 ORTHO05D000733 2.8e-10 69.7 69 46.4
EL10Ac1g01220 Beta vulgaris HOM05D000045 ORTHO05D010054 4.8e-10 68.9 117 33.3
EL10Ac6g13880 Beta vulgaris HOM05D000045 ORTHO05D010054 1.8e-09 67.0 149 32.9
Lj5g0021168 Lotus japonicus HOM05D000045 ORTHO05D000695 1.8e-09 67.0 79 39.2
Hund10326 Selenicereus undatus HOM05D020589 ORTHO05D010054 1.8e-09 67.0 99 35.4
EL10Ac9g22455 Beta vulgaris HOM05D010653 ORTHO05D010054 2.4e-09 66.6 117 32.5
Hund03678 Selenicereus undatus HOM05D004088 ORTHO05D010054 2.4e-09 66.6 74 40.5
EL10Ac2g03393 Beta vulgaris HOM05D009041 ORTHO05D010054 3.1e-09 66.2 101 37.6
Medtr6g060410 Medicago truncatula HOM05D009041 ORTHO05D010054 3.1e-09 66.2 151 31.8
SGA_v2.0_scaffold54G19493 Striga asiatica HOM05D009041 ORTHO05D010054 7.0e-09 65.1 58 48.3
HanXRQChr14g0449641 Helianthus annuus HOM05D000045 ORTHO05D000067 1.6e-08 63.9 112 37.5
MD15G1227300 Malus domestica HOM05D000045 ORTHO05D000067 3.5e-08 62.8 101 31.7
Aqoxy3G00990 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 4.5e-08 62.4 95 41.1
Aqoxy4G01093 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 4.5e-08 62.4 95 41.1
Aqoxy7G02431 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 4.5e-08 62.4 95 41.1
DCAR_002125 Daucus carota HOM05D014716 ORTHO05D022488 4.5e-08 62.4 106 34.9
DCAR_012246 Daucus carota HOM05D014716 ORTHO05D022488 4.5e-08 62.4 106 34.9
DCAR_016937 Daucus carota HOM05D014716 ORTHO05D022488 4.5e-08 62.4 106 34.9
DCAR_024810 Daucus carota HOM05D014716 ORTHO05D022488 4.5e-08 62.4 106 34.9
DCAR_027740 Daucus carota HOM05D014716 ORTHO05D022488 4.5e-08 62.4 106 34.9
HanXRQChr08g0223531 Helianthus annuus HOM05D000045 ORTHO05D000067 5.9e-08 62.0 111 33.3
Lalb_Chr09g0324891 Lupinus albus HOM05D000045 ORTHO05D000067 5.9e-08 62.0 115 32.2
EL10Ac7g17203 Beta vulgaris HOM05D000045 ORTHO05D010054 1.0e-07 61.2 165 29.1
Nn5g31066 Nelumbo nucifera HOM05D000045 ORTHO05D000067 1.0e-07 61.2 104 33.7
AUR62034412 Chenopodium quinoa HOM05D000575 ORTHO05D000695 1.3e-07 60.8 100 34.0
HanXRQChr09g0260181 Helianthus annuus HOM05D000045 ORTHO05D010054 1.3e-07 60.8 108 31.5
PSO017G4008 Papaver somniferum HOM05D000045 ORTHO05D000067 1.3e-07 60.8 104 33.7
PSO170G0991 Papaver somniferum HOM05D000045 ORTHO05D000067 1.3e-07 60.8 104 33.7
AUR62026947 Chenopodium quinoa HOM05D009508 ORTHO05D000695 1.7e-07 60.5 101 34.7
BcaNung05946 Brassica carinata HOM05D000045 ORTHO05D000611 2.2e-07 60.1 164 29.9
ECA232G1430 Erigeron canadensis HOM05D000045 ORTHO05D000695 2.9e-07 59.7 107 31.8
ECA233G1000 Erigeron canadensis HOM05D000045 ORTHO05D000067 2.9e-07 59.7 107 31.8
Nn5g31065 Nelumbo nucifera HOM05D000045 ORTHO05D000067 2.9e-07 59.7 104 32.7
TPR.G36565 Trifolium pratense HOM05D009041 ORTHO05D010054 2.9e-07 59.7 98 37.8
HPP92_019288 Vanilla planifolia HOM05D000045 ORTHO05D000067 2.9e-07 59.7 110 32.7
Hma1.2p1_0032F.1_g018650 Hydrangea macrophylla HOM05D000045 ORTHO05D000067 3.8e-07 59.3 103 32.0
Aa31LG10G13790 Aethionema arabicum HOM05D000045 ORTHO05D000611 5.0e-07 58.9 95 37.9
MBI10_g43911_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D000611 5.0e-07 58.9 102 36.3
Medtr4g080290 Medicago truncatula HOM05D009041 ORTHO05D010054 5.0e-07 58.9 62 40.3
Prupe.7G188000 Prunus persica HOM05D000045 ORTHO05D000067 5.0e-07 58.9 99 33.3
A09p51730 Brassica napus HOM05D000045 ORTHO05D000611 6.5e-07 58.5 148 30.4
C08p34460 Brassica napus HOM05D000045 ORTHO05D000611 6.5e-07 58.5 148 30.4
BolC8t51047H Brassica oleracea HOM05D000045 ORTHO05D000611 6.5e-07 58.5 148 30.4
BraA09t40609Z Brassica rapa HOM05D000045 ORTHO05D000611 6.5e-07 58.5 148 30.4
FvH4_6g21931 Fragaria vesca HOM05D000045 ORTHO05D000067 6.5e-07 58.5 107 33.6
TAR376G0491 Trochodendron aralioides HOM05D000045 ORTHO05D000067 6.5e-07 58.5 102 35.3
GSVIVG01012789001 Vitis vinifera HOM05D000045 ORTHO05D037848 6.5e-07 58.5 94 31.9
BcaB02g07464 Brassica carinata HOM05D000045 ORTHO05D000611 8.5e-07 58.2 97 37.1
PSO170G0855 Papaver somniferum HOM05D000045 ORTHO05D000067 8.5e-07 58.2 99 32.3
Potri.004G209000 Populus trichocarpa HOM05D000045 ORTHO05D000067 8.5e-07 58.2 111 31.5
RcHm_v2.0_Chr2g0096701 Rosa chinensis HOM05D000045 ORTHO05D000067 8.5e-07 58.2 104 28.8
A07p24660 Brassica napus HOM05D000045 ORTHO05D000611 1.1e-06 57.8 97 37.1
C06p26200 Brassica napus HOM05D000045 ORTHO05D000611 1.1e-06 57.8 97 37.1
BolC6t37783H Brassica oleracea HOM05D000045 ORTHO05D000611 1.1e-06 57.8 97 37.1
BraA07t30111Z Brassica rapa HOM05D000045 ORTHO05D000611 1.1e-06 57.8 97 37.1
Ca_25023_v3 Cicer arietinum L. HOM05D000045 ORTHO05D000067 1.1e-06 57.8 99 34.3
QL06p053456 Quercus lobata HOM05D000045 ORTHO05D000067 1.1e-06 57.8 144 29.2
COL.COLO4_07679 Corchorus olitorius HOM05D000045 ORTHO05D000611 1.5e-06 57.4 91 35.2
AL5G41380 Arabidopsis lyrata HOM05D000045 ORTHO05D000611 1.9e-06 57.0 93 37.6
AT3G59470 Arabidopsis thaliana HOM05D000045 ORTHO05D000611 1.9e-06 57.0 93 37.6
BcaC07g40474 Brassica carinata HOM05D000045 ORTHO05D000611 1.9e-06 57.0 93 37.6
CDE05G1679 Ceratophyllum demersum HOM05D000045 ORTHO05D000611 1.9e-06 57.0 127 31.5
ECA240G3819 Erigeron canadensis HOM05D000045 ORTHO05D000067 1.9e-06 57.0 107 30.8
Thhalv10006173m.g Eutrema salsugineum HOM05D000045 ORTHO05D000611 1.9e-06 57.0 93 37.6
Glyma.01G000600 Glycine max HOM05D000045 ORTHO05D000067 1.9e-06 57.0 112 29.5
Manes.02G117425 Manihot esculenta HOM05D000045 ORTHO05D000067 1.9e-06 57.0 119 29.4
PSO017G1954 Papaver somniferum HOM05D000045 ORTHO05D000067 1.9e-06 57.0 99 32.3
Sp5g03690 Schrenkiella parvula HOM05D000045 ORTHO05D000611 1.9e-06 57.0 93 37.6
CSS0007508 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.5e-06 56.6 104 30.8
CSS0016715 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.5e-06 56.6 104 30.8
CSS0016804 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.5e-06 56.6 99 32.3
Carub.0005s2620 Capsella rubella HOM05D000045 ORTHO05D000611 2.5e-06 56.6 93 37.6
Hma1.2p1_0085F.1_g044300 Hydrangea macrophylla HOM05D000045 ORTHO05D000067 2.5e-06 56.6 104 30.8
Medtr4g067290 Medicago truncatula HOM05D000045 ORTHO05D000611 2.5e-06 56.6 89 38.2
Hund06349 Selenicereus undatus HOM05D000045 ORTHO05D000067 2.5e-06 56.6 99 32.3
Glyma.14G000400 Glycine max HOM05D000045 ORTHO05D000067 3.2e-06 56.2 112 29.5
Os03g0255400 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000611 3.2e-06 56.2 98 32.7
Actinidia08025 Actinidia chinensis HOM05D000045 ORTHO05D000611 4.2e-06 55.8 93 35.5
CDE05G1292 Ceratophyllum demersum HOM05D000045 ORTHO05D000067 4.2e-06 55.8 95 36.8
ECA238G0358 Erigeron canadensis HOM05D000045 ORTHO05D000067 4.2e-06 55.8 107 30.8
Ciclev10000383m.g Citrus clementina HOM05D000045 ORTHO05D000067 5.5e-06 55.5 97 34.0
PGR031G1754 Punica granatum HOM05D000045 ORTHO05D000067 5.5e-06 55.5 97 34.0
COL.COLO4_36684 Corchorus olitorius HOM05D000045 ORTHO05D000611 7.2e-06 55.1 97 32.0
Duzib052G0228 Durio zibethinus HOM05D000045 ORTHO05D000067 7.2e-06 55.1 105 30.5
Prupe.3G021400 Prunus persica HOM05D000045 ORTHO05D000611 7.2e-06 55.1 103 33.0
TWI63G1472 Tripterygium wilfordii HOM05D000045 ORTHO05D000611 7.2e-06 55.1 89 38.2
CARHR169850 Cardamine hirsuta HOM05D000045 ORTHO05D000611 9.4e-06 54.7 93 36.6
Duzib116G0469 Durio zibethinus HOM05D000045 ORTHO05D000067 9.4e-06 54.7 99 35.4
Glyma.15G029900 Glycine max HOM05D000045 ORTHO05D000611 9.4e-06 54.7 89 38.2
MD06G1002400 Malus domestica HOM05D000045 ORTHO05D000067 9.4e-06 54.7 101 36.6
Rhsim10G0190800 Rhododendron simsii HOM05D000045 ORTHO05D000067 9.4e-06 54.7 100 32.0
Hund11928 Selenicereus undatus HOM05D000045 ORTHO05D000611 9.4e-06 54.7 89 39.3
vmacro20404 Vaccinium macrocarpon HOM05D000045 ORTHO05D000611 9.4e-06 54.7 107 33.6


User provided reference genes

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