Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold20G09058 Striga asiatica HOM05D005631 ORTHO05D006765 1.0e-91 340.1 176 100.0
SGA_v2.0_scaffold18G08260 Striga asiatica HOM05D005631 ORTHO05D006765 4.5e-84 314.7 178 95.5
SalBow1G1570 Salvia bowleyana HOM05D005631 ORTHO05D006765 5.3e-77 291.2 178 87.6
Migut.H00695 Erythranthe guttata HOM05D005631 ORTHO05D006765 2.2e-75 285.8 178 87.1
Oeu059694.1 Olea europaea HOM05D005631 ORTHO05D006765 1.5e-74 283.1 178 84.3
CSS0000896 Camellia sinensis var. sinensis HOM05D005631 ORTHO05D006765 1.9e-74 282.7 178 83.7
Manes.02G211700 Manihot esculenta HOM05D005631 ORTHO05D006765 4.2e-74 281.6 178 83.1
MSTRG.2645 Avicennia marina HOM05D005631 ORTHO05D006765 9.4e-74 280.4 178 84.8
Thecc.09G357600 Theobroma cacao HOM05D005631 ORTHO05D006765 4.0e-72 275.0 178 81.5
Gohir.A03G025600 Gossypium hirsutum HOM05D005631 ORTHO05D006765 6.8e-72 274.2 178 80.9
Gohir.D03G142900 Gossypium hirsutum HOM05D005631 ORTHO05D006765 6.8e-72 274.2 178 80.9
Gorai.003G150100 Gossypium raimondii HOM05D005631 ORTHO05D006765 6.8e-72 274.2 178 80.9
Actinidia23857 Actinidia chinensis HOM05D005631 ORTHO05D006765 8.8e-72 273.9 178 81.5
DCAR_004046 Daucus carota HOM05D005631 ORTHO05D006765 1.5e-71 273.1 178 82.6
Hma1.2p1_1586F.1_g292190 Hydrangea macrophylla HOM05D005631 ORTHO05D006765 2.8e-70 268.9 178 79.8
Rhsim01G0240900 Rhododendron simsii HOM05D005631 ORTHO05D006765 3.7e-70 268.5 180 81.1
Potri.013G152600 Populus trichocarpa HOM05D005631 ORTHO05D006765 4.8e-70 268.1 178 78.1
vmacro14621 Vaccinium macrocarpon HOM05D005631 ORTHO05D006765 4.8e-70 268.1 181 81.2
QL01p026260 Quercus lobata HOM05D005631 ORTHO05D006765 8.3e-70 267.3 177 79.1
Sabra13G0122700 Salix brachista HOM05D005631 ORTHO05D006765 1.1e-69 266.9 178 78.1
Hund18954 Selenicereus undatus HOM05D000127 ORTHO05D006765 1.8e-69 266.2 178 78.1
CsaV3_6G015890 Cucumis sativus L. HOM05D005631 ORTHO05D006765 2.4e-69 265.8 178 78.7
PGSC0003DMG400022531 Solanum tuberosum HOM05D005631 ORTHO05D006765 2.4e-69 265.8 178 80.9
Cfa011776 Carpinus fangiana HOM05D005631 ORTHO05D006765 4.1e-69 265.0 179 78.2
Lsat_1_v5_gn_6_47101 Lactuca sativa HOM05D005631 ORTHO05D006765 4.1e-69 265.0 178 79.2
MELO3C025697.2 Cucumis melo HOM05D005631 ORTHO05D006765 5.4e-69 264.6 178 78.1
CAN.G354.39 Capsicum annuum HOM05D005631 ORTHO05D006765 7.0e-69 264.2 179 79.9
Solyc03g033480.4 Solanum lycopersicum HOM05D005631 ORTHO05D006765 7.0e-69 264.2 178 80.3
Ca_15010_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 9.1e-69 263.8 179 79.9
Nitab4.5_0003548g0030 Nicotiana tabacum HOM05D005631 ORTHO05D006765 9.1e-69 263.8 178 80.3
GSVIVG01033331001 Vitis vinifera HOM05D005631 ORTHO05D006765 1.2e-68 263.5 178 79.2
Cpa.g.sc2.358 Carica papaya HOM05D005631 ORTHO05D006765 2.0e-68 262.7 179 79.3
ClCG02G019260 Citrullus lanatus HOM05D005631 ORTHO05D006765 5.9e-68 261.2 179 78.2
PGR102G0278 Punica granatum HOM05D005631 ORTHO05D006765 7.7e-68 260.8 179 81.0
Cc07_g10850 Coffea canephora HOM05D005631 ORTHO05D006765 2.3e-67 259.2 176 77.8
Medtr3g465690 Medicago truncatula HOM05D005631 ORTHO05D006765 2.3e-67 259.2 180 80.0
Sopen03g006230 Solanum pennellii HOM05D005631 ORTHO05D006765 2.9e-67 258.8 178 79.2
MD03G1056300 Malus domestica HOM05D005631 ORTHO05D006765 5.0e-67 258.1 178 80.3
FvH4_3g39740 Fragaria vesca HOM05D005631 ORTHO05D006765 6.5e-67 257.7 178 79.2
FAN11G1428 Fragaria x ananassa HOM05D005631 ORTHO05D006765 6.5e-67 257.7 178 79.2
FAN16G0042 Fragaria x ananassa HOM05D005631 ORTHO05D006765 6.5e-67 257.7 178 79.2
Prupe.6G048500 Prunus persica HOM05D005631 ORTHO05D006765 6.5e-67 257.7 179 78.8
FAN21G1424 Fragaria x ananassa HOM05D005631 ORTHO05D006765 8.6e-67 257.3 178 79.2
Glyma.18G057300 Glycine max HOM05D005631 ORTHO05D006765 1.1e-66 256.9 179 77.7
Sed0015217 Sechium edule HOM05D005631 ORTHO05D006765 1.9e-66 256.1 179 77.7
RcHm_v2.0_Chr5g0071621 Rosa chinensis HOM05D005631 ORTHO05D006765 2.5e-66 255.8 178 78.7
Eucgr.B04002 Eucalyptus grandis HOM05D005631 ORTHO05D006765 3.2e-66 255.4 176 77.3
Lalb_Chr15g0083281 Lupinus albus HOM05D005631 ORTHO05D006765 4.2e-66 255.0 180 78.3
Nitab4.5_0000438g0150 Nicotiana tabacum HOM05D005631 ORTHO05D006765 4.2e-66 255.0 178 79.2
HanXRQChr10g0284941 Helianthus annuus HOM05D005631 ORTHO05D006765 5.5e-66 254.6 178 77.0
Atru.chr3.4122 Acer truncatum HOM05D005631 ORTHO05D006765 6.1e-65 251.1 171 78.9
arahy.Tifrunner.gnm1.ann1.7E53FC Arachis hypogaea HOM05D005631 ORTHO05D006765 1.4e-64 250.0 180 76.1
Glyma.11G164100 Glycine max HOM05D005631 ORTHO05D006765 1.8e-64 249.6 179 76.0
Nn1g05206 Nelumbo nucifera HOM05D005631 ORTHO05D006765 2.3e-64 249.2 178 74.2
ATR0304G021 Amborella trichopoda HOM05D005631 ORTHO05D006765 4.0e-64 248.4 179 75.4
Ciclev10029319m.g Citrus clementina HOM05D005631 ORTHO05D006765 5.2e-64 248.1 171 78.9
CANSAT54G1076 Cannabis sativa HOM05D005631 ORTHO05D006765 6.8e-64 247.7 179 75.4
TAR633G1157 Trochodendron aralioides HOM05D005631 ORTHO05D006765 1.2e-63 246.9 176 73.9
HPP92_019076 Vanilla planifolia HOM05D005631 ORTHO05D006765 2.0e-63 246.1 178 73.6
arahy.Tifrunner.gnm1.ann1.I7JS5F Arachis hypogaea HOM05D005631 ORTHO05D006765 3.4e-63 245.4 174 77.0
unitig_899.g14680 Utricularia gibba HOM05D005631 ORTHO05D006765 7.5e-63 244.2 176 75.6
PSO349G0142 Papaver somniferum HOM05D005631 ORTHO05D006765 9.8e-63 243.8 178 74.7
FAN25G2299 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.3e-62 243.4 178 75.3
MD11G1057500 Malus domestica HOM05D005631 ORTHO05D006765 3.7e-62 241.9 178 75.8
Lj6g0005877 Lotus japonicus HOM05D005631 ORTHO05D006765 1.8e-61 239.6 171 77.2
ECA248G0403 Erigeron canadensis HOM05D005631 ORTHO05D006765 7.0e-61 237.7 177 72.9
THA.LOC104810692 Tarenaya hassleriana HOM05D005631 ORTHO05D006765 5.9e-60 234.6 179 73.2
AL7G45820 Arabidopsis lyrata HOM05D005631 ORTHO05D006765 8.6e-59 230.7 179 72.1
A03p12230 Brassica napus HOM05D005631 ORTHO05D006765 1.1e-58 230.3 179 72.1
C03p14340 Brassica napus HOM05D005631 ORTHO05D006765 1.1e-58 230.3 179 72.1
BraA03t10534Z Brassica rapa HOM05D005631 ORTHO05D006765 1.1e-58 230.3 179 72.1
VMungo1383G2760 Vigna mungo HOM05D005631 ORTHO05D006765 1.1e-58 230.3 157 78.3
C09p50330 Brassica napus HOM05D005631 ORTHO05D006765 1.9e-58 229.6 179 71.5
BraA10t43643Z Brassica rapa HOM05D005631 ORTHO05D006765 2.5e-58 229.2 179 71.5
AT5G37055 Arabidopsis thaliana HOM05D005631 ORTHO05D006765 3.3e-58 228.8 179 71.5
Aa31LG11G240 Aethionema arabicum HOM05D000127 ORTHO05D007184 4.3e-58 228.4 178 70.2
BcaB08g36180 Brassica carinata HOM05D005631 ORTHO05D006765 4.3e-58 228.4 179 71.5
CARHR272280 Cardamine hirsuta HOM05D005631 ORTHO05D006765 5.6e-58 228.0 178 71.3
A10p15820 Brassica napus HOM05D005631 ORTHO05D006765 7.3e-58 227.6 179 70.9
Carub.0007s3232 Capsella rubella HOM05D005631 ORTHO05D006765 9.5e-58 227.3 179 70.4
BcaC04g19866 Brassica carinata HOM05D005631 ORTHO05D006765 2.1e-57 226.1 179 70.4
BolC9t57889H Brassica oleracea HOM05D005631 ORTHO05D006765 2.1e-57 226.1 179 70.4
BolC3t13878H Brassica oleracea HOM05D005631 ORTHO05D006765 2.8e-57 225.7 179 70.4
Thhalv10014837m.g Eutrema salsugineum HOM05D005631 ORTHO05D006765 8.0e-57 224.2 179 70.4
Ca_15008_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 1.7e-54 216.5 155 78.7
Aqoxy1G01288 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 1.1e-53 213.8 169 70.4
COL.COLO4_11152 Corchorus olitorius HOM05D005631 ORTHO05D006765 2.4e-53 212.6 143 76.2
Os03g0367800 Oryza sativa ssp. japonica HOM05D005631 ORTHO05D006765 1.6e-52 209.9 178 65.2
Zm00001eb195120 Zea mays HOM05D005631 ORTHO05D006765 2.7e-52 209.1 177 65.0
Phvul.006G073900 Phaseolus vulgaris HOM05D005631 ORTHO05D006765 7.8e-52 207.6 157 73.9
SEGI_31870 Sequoiadendron giganteum HOM05D005631 ORTHO05D006765 6.6e-51 204.5 144 73.6
Oeu059678.1 Olea europaea HOM05D005631 ORTHO05D006765 1.1e-50 203.8 154 72.1
EL10Ac7g15917 Beta vulgaris HOM05D005631 ORTHO05D006765 1.9e-50 203.0 179 63.1
Mapoly0066s0110 Marchantia polymorpha HOM05D005631 ORTHO05D006765 1.8e-48 196.4 182 60.4
Sabra06G0125700 Salix brachista HOM05D005631 ORTHO05D006765 2.6e-47 192.6 158 68.4
Pp3c4_18980 Physcomitrium patens HOM05D005631 ORTHO05D006765 8.3e-46 187.6 180 58.9
TPR.G25706 Trifolium pratense HOM05D005631 ORTHO05D006765 1.2e-44 183.7 143 76.9
Peaxi162Scf00635g00621 Petunia axillaris HOM05D005631 ORTHO05D006765 7.8e-44 181.0 176 60.2
Atru.chr3.4121 Acer truncatum HOM05D005631 ORTHO05D006765 5.0e-43 178.3 168 61.9
Psat5g026160 Pisum sativum HOM05D005631 ORTHO05D006765 3.3e-42 175.6 148 72.3
SMO134G0149 Selaginella moellendorffii HOM05D005631 ORTHO05D006765 5.2e-40 168.3 180 53.3
AUR62001872 Chenopodium quinoa HOM05D005631 ORTHO05D006765 4.4e-39 165.2 142 68.3
VMungo0540G1856 Vigna mungo HOM05D005631 ORTHO05D006765 1.3e-38 163.7 121 75.2
AUR62009671 Chenopodium quinoa HOM05D005631 ORTHO05D006765 1.7e-38 163.3 141 68.1
Duzib150G1412 Durio zibethinus HOM05D005631 ORTHO05D006765 8.6e-35 151.0 119 74.8
BcaB01g04521 Brassica carinata HOM05D005631 ORTHO05D006765 1.4e-32 143.7 159 57.9
Actinidia34479 Actinidia chinensis HOM05D005631 ORTHO05D006765 7.6e-31 137.9 113 74.3
CiPaw.13G069500 Carya illinoinensis HOM05D005631 ORTHO05D006765 3.2e-29 132.5 111 72.1
CDE09G1253 Ceratophyllum demersum HOM05D001009 ORTHO05D000829 4.1e-29 132.1 116 70.7
AagrBONN_evm.TU.Sc2ySwM_117.69 Anthoceros agrestis HOM05D005631 ORTHO05D006765 1.2e-25 120.6 176 41.5
Sp6g20150 Schrenkiella parvula HOM05D000127 ORTHO05D007184 4.9e-22 108.6 109 66.1
MCO05G013 Micromonas commoda HOM05D005631 ORTHO05D006765 1.1e-21 107.5 167 43.1
Sc21g0005270 Simmondsia chinensis HOM05D005631 ORTHO05D006765 1.1e-21 107.5 109 63.3
Oeu008095.1 Olea europaea HOM05D005631 ORTHO05D006765 1.6e-20 103.6 69 84.1
Sabra19G0122200 Salix brachista HOM05D005631 ORTHO05D006765 1.1e-16 90.9 93 60.2
Sabra16G0029400 Salix brachista HOM05D005631 ORTHO05D006765 2.6e-15 86.3 88 60.2
CDE02G1786 Ceratophyllum demersum HOM05D005631 ORTHO05D006765 3.2e-13 79.3 124 49.2
Cc05_g02510 Coffea canephora HOM05D005631 ORTHO05D006765 4.2e-13 79.0 110 50.9
Oeu008088.1 Olea europaea HOM05D005631 ORTHO05D006765 4.2e-13 79.0 81 55.6
MBI18_g07568_MAGBIO Magnolia biondii HOM05D005631 ORTHO05D006765 7.1e-13 78.2 68 66.2
BcaC09g51457 Brassica carinata HOM05D005631 ORTHO05D006765 1.0e-11 74.3 59 72.9
Sabra07G0096200 Salix brachista HOM05D005274 ORTHO05D006765 1.0e-11 74.3 92 54.3
BcaC05g26847 Brassica carinata HOM05D005631 ORTHO05D006765 3.0e-11 72.8 59 71.2
A08p25520 Brassica napus HOM05D005631 ORTHO05D006765 3.0e-11 72.8 59 71.2
BolC1t05347H Brassica oleracea HOM05D005631 ORTHO05D006765 1.1e-10 70.9 59 69.5
BcaC09g51408 Brassica carinata HOM05D005631 ORTHO05D006765 1.5e-10 70.5 59 69.5
BcaC08g44597 Brassica carinata HOM05D005631 ORTHO05D006765 2.5e-10 69.7 60 71.7
Sabra02G0153300 Salix brachista HOM05D005631 ORTHO05D006765 2.5e-10 69.7 71 60.6
Sabra19G0131600 Salix brachista HOM05D005631 ORTHO05D006765 2.5e-10 69.7 98 50.0
Sabra04G0079400 Salix brachista HOM05D005631 ORTHO05D006765 1.3e-09 67.4 71 59.2
A07p13430 Brassica napus HOM05D005631 ORTHO05D006765 1.6e-09 67.0 59 69.5
Sabra08G0141900 Salix brachista HOM05D000225 ORTHO05D002520 2.8e-09 66.2 71 59.2
Sabra15G0067400 Salix brachista HOM05D003748 ORTHO05D004108 1.8e-08 63.5 81 53.1
C01p12950 Brassica napus HOM05D005631 ORTHO05D006765 5.3e-08 62.0 43 79.1
C01p13430 Brassica napus HOM05D005631 ORTHO05D006765 2.0e-07 60.1 43 76.7
Cre01.g044000 Chlamydomonas reinhardtii HOM05D005631 ORTHO05D006765 4.5e-07 58.9 144 31.9
CBR_g4734 Chara braunii HOM05D005631 ORTHO05D006765 5.8e-07 58.5 103 44.7
C04p57300 Brassica napus HOM05D005631 ORTHO05D006765 7.6e-07 58.2 43 74.4
Aqoxy1G01289 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 2.2e-06 56.6 44 75.0


User provided reference genes

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