Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold20G08993 Striga asiatica HOM05D000003 ORTHO05D401095 7.1e-77 290.4 138 100.0
SGA_v2.0_scaffold17G08173 Striga asiatica HOM05D000003 ORTHO05D000004 2.4e-16 89.4 144 37.5
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 1.6e-15 86.7 141 37.6
SGA_v2.0_scaffold259G45819 Striga asiatica HOM05D000003 ORTHO05D000004 2.6e-10 69.3 129 34.9
SGA_v2.0_scaffold23G10019 Striga asiatica HOM05D000003 ORTHO05D000004 5.8e-10 68.2 139 33.1
SGA_v2.0_scaffold71G23744 Striga asiatica HOM05D004014 ORTHO05D005890 7.5e-10 67.8 133 33.1
SGA_v2.0_scaffold6G03466 Striga asiatica HOM05D000003 ORTHO05D000004 1.7e-09 66.6 133 30.8
Cc01_g07280 Coffea canephora HOM05D000003 ORTHO05D000004 3.7e-09 65.5 149 28.9
SGA_v2.0_scaffold11G05791 Striga asiatica HOM05D000563 ORTHO05D000536 3.7e-09 65.5 134 32.1
Aa31LG1G9570 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.9e-09 65.1 139 28.8
Aa31LG9G3910 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.9e-09 65.1 133 30.8
CiPaw.15G073500 Carya illinoinensis HOM05D000003 ORTHO05D000004 4.9e-09 65.1 146 30.8
Aa31LG2G18130 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.4e-09 64.7 138 27.5
Aa31sc56G70 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.4e-09 64.7 133 29.3
Aa31LG8G12700 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.3e-09 64.3 139 28.1
Aa31LG6G10540 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.1e-08 63.9 139 28.8
Aa31LG8G12860 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.1e-08 63.9 135 26.7
Aa31LG7G12870 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.4e-08 63.5 138 32.6
Aa31sc407G40 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.4e-08 63.5 140 29.3
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 1.4e-08 63.5 141 29.8
Aa31LG10G9140 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.4e-08 62.8 124 29.8
Aa31sc85G60 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.2e-08 62.4 138 26.8
Cc08_g06220 Coffea canephora HOM05D000003 ORTHO05D000004 3.2e-08 62.4 143 26.6
Aa31LG9G15190 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.4e-08 61.6 134 26.9
Aa31LG1G5100 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.1e-08 61.2 137 28.5
Aa31LG3G5890 Aethionema arabicum HOM05D000003 ORTHO05D000004 9.2e-08 60.8 131 28.2
SGA_v2.0_scaffold298G47693 Striga asiatica HOM05D000003 ORTHO05D000004 9.2e-08 60.8 143 27.3
Aa31LG1G4180 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.2e-07 60.5 138 26.1
Aa31LG5G20940 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.2e-07 60.5 138 25.4
Aa31sc168G30 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.2e-07 60.5 138 26.1
Aa31sc427G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.2e-07 60.5 134 28.4
Aa31sc58G30 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.2e-07 60.5 129 30.2
SGA_v2.0_scaffold14G07070 Striga asiatica HOM05D000003 ORTHO05D000004 1.2e-07 60.5 142 26.1
Aa31LG8G11190 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.6e-07 60.1 133 29.3
Aa31sc74G100 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.6e-07 60.1 142 26.8
BcaC06g30787 Brassica carinata HOM05D000003 ORTHO05D000004 1.6e-07 60.1 128 31.2
CANSAT11G1229 Cannabis sativa HOM05D000003 ORTHO05D000004 1.6e-07 60.1 144 29.2
Aa31sc729G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.1e-07 59.7 143 28.0
CANSAT80G2861 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-07 59.7 144 30.6
SGA_v2.0_scaffold21G09447 Striga asiatica HOM05D006355 ORTHO05D008284 2.1e-07 59.7 121 33.1
Aa31LG1G6030 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.7e-07 59.3 144 29.2
SGA_v2.0_scaffold344G49482 Striga asiatica HOM05D000003 ORTHO05D000004 2.7e-07 59.3 148 25.0
Aa31sc214G50 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.5e-07 58.9 143 28.0
Aa31LG3G12630 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.6e-07 58.5 134 29.1
Aa31LG11G4970 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.0e-07 58.2 133 26.3
Aa31LG5G21260 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.0e-07 58.2 133 27.1
Aa31sc60G90 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.0e-07 58.2 135 28.9
CANSAT78G1434 Cannabis sativa HOM05D000003 ORTHO05D000004 6.0e-07 58.2 145 29.7
CANSAT21G1936 Cannabis sativa HOM05D000003 ORTHO05D000004 7.8e-07 57.8 145 27.6
TPR.G19381 Trifolium pratense HOM05D000003 ORTHO05D000004 7.8e-07 57.8 145 27.6
Aa31LG1G4610 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.0e-06 57.4 145 27.6
Aa31sc244G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.0e-06 57.4 145 25.5
SGA_v2.0_scaffold102G29891 Striga asiatica HOM05D003766 ORTHO05D004607 1.0e-06 57.4 106 33.0
CANSAT78G2184 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-06 57.0 146 28.1
Aa31sc128G60 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.7e-06 56.6 138 23.9
Aa31sc823G50 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.7e-06 56.6 145 24.1
CANSAT21G2012 Cannabis sativa HOM05D000003 ORTHO05D000004 1.7e-06 56.6 144 27.8
CANSAT21G2319 Cannabis sativa HOM05D000003 ORTHO05D000004 1.7e-06 56.6 145 29.0
TPR.G22878 Trifolium pratense HOM05D000003 ORTHO05D000004 1.7e-06 56.6 135 28.1
TPR.G37077 Trifolium pratense HOM05D000003 ORTHO05D000004 1.7e-06 56.6 147 29.3
Aa31LG3G5250 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.3e-06 56.2 147 26.5
Aa31sc588G40 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.3e-06 56.2 141 27.0
Aa31sc85G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.3e-06 56.2 150 29.3
TWI32G0745 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.3e-06 56.2 146 27.4
TWI53G0186 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.3e-06 56.2 134 28.4
Atru.chr4.1440 Acer truncatum HOM05D000003 ORTHO05D000004 3.0e-06 55.8 147 29.9
Aa31sc61G30 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.0e-06 55.8 147 25.2
CANSAT25G0932 Cannabis sativa HOM05D000003 ORTHO05D000004 3.0e-06 55.8 146 27.4
Aa31LG2G12260 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.9e-06 55.5 138 26.1
Aa31sc502G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.9e-06 55.5 129 31.0
RcHm_v2.0_Chr4g0410641 Rosa chinensis HOM05D000003 ORTHO05D000004 3.9e-06 55.5 145 25.5
Aa31LG4G10540 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.1e-06 55.1 146 26.7
Aa31LG8G11140 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.1e-06 55.1 145 26.9
CANSAT01G0199 Cannabis sativa HOM05D000003 ORTHO05D000004 5.1e-06 55.1 143 29.4
Aa31LG11G5960 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.6e-06 54.7 139 26.6
Aa31LG11G9560 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.6e-06 54.7 128 28.9
Aa31LG6G3800 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.6e-06 54.7 148 24.3
Aa31sc142G60 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.6e-06 54.7 148 24.3
CANSAT56G2884 Cannabis sativa HOM05D000003 ORTHO05D000004 6.6e-06 54.7 126 30.2
TWI53G0004 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 6.6e-06 54.7 144 27.8
Aa31LG11G11010 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.6e-06 54.3 138 23.9
TWI32G0681 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 8.6e-06 54.3 144 27.8


User provided reference genes

Program Settings