Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold202G41432 Striga asiatica HOM05D010565 ORTHO05D011213 2.6e-94 348.6 164 100.0
SGA_v2.0_scaffold19G08782 Striga asiatica HOM05D010565 ORTHO05D011213 1.4e-92 342.8 164 98.2
SGA_v2.0_scaffold170G38754 Striga asiatica HOM05D010565 ORTHO05D011213 7.2e-92 340.5 164 97.6
SGA_v2.0_scaffold1G00691 Striga asiatica HOM05D010565 ORTHO05D011213 7.2e-92 340.5 164 97.6
SGA_v2.0_scaffold279G46783 Striga asiatica HOM05D005209 ORTHO05D006188 3.2e-31 139.0 146 47.3
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 1.9e-20 103.2 129 43.4
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 6.2e-19 98.2 92 43.5
SGA_v2.0_scaffold380G50369 Striga asiatica HOM05D010565 ORTHO05D011213 4.0e-18 95.5 89 41.6
SGA_v2.0_scaffold14G07070 Striga asiatica HOM05D000003 ORTHO05D000004 6.8e-18 94.7 90 43.3
SGA_v2.0_scaffold17G08173 Striga asiatica HOM05D000003 ORTHO05D000004 7.6e-17 91.3 89 41.6
SGA_v2.0_scaffold16G07708 Striga asiatica HOM05D004030 ORTHO05D004952 2.9e-16 89.4 84 42.9
SGA_v2.0_scaffold122G33296 Striga asiatica HOM05D000003 ORTHO05D000004 2.4e-15 86.3 91 38.5
SGA_v2.0_scaffold1G00790 Striga asiatica HOM05D010565 ORTHO05D011213 3.2e-15 85.9 90 40.0
SGA_v2.0_scaffold335G49110 Striga asiatica HOM05D001364 ORTHO05D001316 9.2e-15 84.3 90 36.7
SGA_v2.0_scaffold10G05484 Striga asiatica HOM05D010565 ORTHO05D011213 4.6e-14 82.0 89 37.1
SGA_v2.0_scaffold71G23744 Striga asiatica HOM05D004014 ORTHO05D005890 6.0e-14 81.6 88 43.2
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 3.9e-13 79.0 88 33.0
Cc11_g12030 Coffea canephora HOM05D000003 ORTHO05D000004 5.1e-13 78.6 96 36.5
SGA_v2.0_scaffold4G02180 Striga asiatica HOM05D000688 ORTHO05D004737 2.8e-11 72.8 88 34.1
SGA_v2.0_scaffold26G11238 Striga asiatica HOM05D008147 ORTHO05D010215 3.6e-11 72.4 76 38.2
SGA_v2.0_scaffold2392G54112 Striga asiatica HOM05D000003 ORTHO05D000006 2.4e-10 69.7 84 33.3
SGA_v2.0_scaffold419G51290 Striga asiatica HOM05D010565 ORTHO05D011213 2.4e-10 69.7 57 43.9
SGA_v2.0_scaffold22G09837 Striga asiatica HOM05D010565 ORTHO05D011213 3.1e-10 69.3 79 38.0
Cc08_g06220 Coffea canephora HOM05D000003 ORTHO05D000004 5.2e-10 68.6 96 32.3
SGA_v2.0_scaffold140G35468 Striga asiatica HOM05D023911 ORTHO05D011213 6.9e-10 68.2 88 33.0
Cc04_g14660 Coffea canephora HOM05D000003 ORTHO05D000167 9.0e-10 67.8 90 33.3
SGA_v2.0_scaffold67G22785 Striga asiatica HOM05D010565 ORTHO05D011213 1.5e-09 67.0 68 35.3
SGA_v2.0_scaffold132G34546 Striga asiatica HOM05D010565 ORTHO05D011213 4.4e-09 65.5 79 31.6
SGA_v2.0_scaffold81G26044 Striga asiatica HOM05D000123 ORTHO05D000004 5.8e-09 65.1 78 33.3
Nitab4.5_0002433g0100 Nicotiana tabacum HOM05D007931 ORTHO05D010331 9.9e-09 64.3 92 32.6
SGA_v2.0_scaffold5G02882 Striga asiatica HOM05D001043 ORTHO05D001555 1.3e-08 63.9 79 36.7
SGA_v2.0_scaffold191G40465 Striga asiatica HOM05D010565 ORTHO05D011213 1.7e-08 63.5 76 35.5
SGA_v2.0_scaffold4G01975 Striga asiatica HOM05D010565 ORTHO05D011213 2.2e-08 63.2 59 35.6
SGA_v2.0_scaffold259G45819 Striga asiatica HOM05D000003 ORTHO05D000004 2.9e-08 62.8 81 30.9
SGA_v2.0_scaffold309G48130 Striga asiatica HOM05D007006 ORTHO05D008925 4.9e-08 62.0 84 40.5
Cc01_g07280 Coffea canephora HOM05D000003 ORTHO05D000004 6.4e-08 61.6 86 32.6
Nitab4.5_0013264g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 6.4e-08 61.6 93 33.3
SGA_v2.0_scaffold191G40503 Striga asiatica HOM05D000003 ORTHO05D000004 6.4e-08 61.6 89 30.3
SGA_v2.0_scaffold23G10182 Striga asiatica HOM05D010565 ORTHO05D011213 6.4e-08 61.6 88 33.0
SGA_v2.0_scaffold36G14522 Striga asiatica HOM05D002339 ORTHO05D002545 2.4e-07 59.7 65 53.8
SGA_v2.0_scaffold302G47834 Striga asiatica HOM05D010565 ORTHO05D011213 9.3e-07 57.8 44 50.0
SGA_v2.0_scaffold259G45830 Striga asiatica HOM05D010565 ORTHO05D011213 1.6e-06 57.0 52 34.6
SGA_v2.0_scaffold257G45726 Striga asiatica HOM05D010565 ORTHO05D011213 2.1e-06 56.6 132 28.8
SGA_v2.0_scaffold36G14413 Striga asiatica HOM05D000003 ORTHO05D011213 2.7e-06 56.2 62 32.3
SGA_v2.0_scaffold78G25376 Striga asiatica HOM05D010565 ORTHO05D405841 2.7e-06 56.2 54 42.6
SGA_v2.0_scaffold23G10153 Striga asiatica HOM05D003836 ORTHO05D004556 4.6e-06 55.5 77 29.9


User provided reference genes

Program Settings