Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00552 Striga asiatica HOM05D000319 ORTHO05D005616 4.2e-147 524.6 255 100.0
MSTRG.18283 Avicennia marina HOM05D000319 ORTHO05D005616 1.4e-139 499.6 255 94.1
Migut.D00371 Erythranthe guttata HOM05D000319 ORTHO05D005616 1.6e-135 486.1 255 91.0
CSS0020063 Camellia sinensis var. sinensis HOM05D000319 ORTHO05D005616 8.1e-135 483.8 255 90.2
unitig_26.g10148 Utricularia gibba HOM05D000319 ORTHO05D005616 1.7e-132 476.1 255 89.8
Cc01_g18870 Coffea canephora HOM05D000319 ORTHO05D005616 8.4e-132 473.8 255 88.2
Dinv34565 Davidia involucrata HOM05D000319 ORTHO05D005616 8.4e-132 473.8 255 88.2
TWI18G1113 Tripterygium wilfordii HOM05D000319 ORTHO05D005616 8.4e-132 473.8 255 89.0
Gohir.D08G055800 Gossypium hirsutum HOM05D000319 ORTHO05D005616 1.4e-131 473.0 255 89.4
Gohir.A08G045400 Gossypium hirsutum HOM05D000319 ORTHO05D005616 3.2e-131 471.9 255 89.0
Gorai.004G056700 Gossypium raimondii HOM05D000319 ORTHO05D005616 3.2e-131 471.9 255 88.6
Cpa.g.sc52.96 Carica papaya HOM05D000319 ORTHO05D005616 4.2e-131 471.5 255 89.0
COL.COLO4_06081 Corchorus olitorius HOM05D000319 ORTHO05D005616 4.2e-131 471.5 255 89.4
Lj2A1160T39 Lonicera japonica HOM05D000319 ORTHO05D005616 5.5e-131 471.1 255 88.6
HanXRQChr15g0467021 Helianthus annuus HOM05D000319 ORTHO05D005616 2.1e-130 469.2 255 88.2
Rhsim13G0030900 Rhododendron simsii HOM05D000319 ORTHO05D005616 2.1e-130 469.2 255 88.6
Ciclev10021811m.g Citrus clementina HOM05D000319 ORTHO05D005616 2.7e-130 468.8 255 88.2
SalBow4G3161 Salvia bowleyana HOM05D000319 ORTHO05D005616 2.7e-130 468.8 255 89.0
Thecc.01G267900 Theobroma cacao HOM05D000319 ORTHO05D005616 2.7e-130 468.8 255 89.0
Actinidia19981 Actinidia chinensis HOM05D000319 ORTHO05D005616 4.6e-130 468.0 255 87.8
Lsat_1_v5_gn_9_8201 Lactuca sativa HOM05D000319 ORTHO05D005616 6.0e-130 467.6 255 87.5
Nitab4.5_0003053g0020 Nicotiana tabacum HOM05D000319 ORTHO05D005616 6.0e-130 467.6 254 88.2
Duzib211G0655 Durio zibethinus HOM05D000319 ORTHO05D005616 1.8e-129 466.1 255 87.8
THA.LOC104825981 Tarenaya hassleriana HOM05D000319 ORTHO05D005616 2.3e-129 465.7 256 87.9
Duzib138G1611 Durio zibethinus HOM05D000319 ORTHO05D005616 3.0e-129 465.3 255 88.2
Hma1.2p1_0760F.1_g214240 Hydrangea macrophylla HOM05D000319 ORTHO05D005616 3.0e-129 465.3 256 87.1
Nn1g02549 Nelumbo nucifera HOM05D000319 ORTHO05D005616 3.0e-129 465.3 252 88.5
Nitab4.5_0000187g0170 Nicotiana tabacum HOM05D000319 ORTHO05D005616 3.0e-129 465.3 254 87.8
RcHm_v2.0_Chr2g0134501 Rosa chinensis HOM05D000319 ORTHO05D005616 5.1e-129 464.5 255 88.2
Atru.chr5.1559 Acer truncatum HOM05D000319 ORTHO05D005616 6.7e-129 464.2 255 87.8
GSVIVG01000718001 Vitis vinifera HOM05D000319 ORTHO05D005616 6.7e-129 464.2 255 87.1
Cfa008743 Carpinus fangiana HOM05D000319 ORTHO05D005616 8.7e-129 463.8 255 88.6
Haze_11759 Corylus avellana HOM05D000319 ORTHO05D005616 1.1e-128 463.4 255 88.6
PGR044G1796 Punica granatum HOM05D000319 ORTHO05D005616 1.5e-128 463.0 256 87.1
Potri.002G045200 Populus trichocarpa HOM05D000319 ORTHO05D005616 1.9e-128 462.6 255 87.5
THA.LOC104801256 Tarenaya hassleriana HOM05D000319 ORTHO05D005616 2.5e-128 462.2 257 87.2
Potri.005G218000 Populus trichocarpa HOM05D000319 ORTHO05D005616 4.3e-128 461.5 255 87.5
Manes.01G201800 Manihot esculenta HOM05D000319 ORTHO05D005616 7.4e-128 460.7 255 88.2
Actinidia09093 Actinidia chinensis HOM05D000319 ORTHO05D005616 9.6e-128 460.3 255 87.1
Manes.14G005900 Manihot esculenta HOM05D000319 ORTHO05D005616 9.6e-128 460.3 255 87.5
TWI75G0800 Tripterygium wilfordii HOM05D000319 ORTHO05D005616 2.1e-127 459.1 255 86.3
Eucgr.K03315 Eucalyptus grandis HOM05D000319 ORTHO05D005616 4.8e-127 458.0 255 87.8
Ah.11g049990 Amaranthus hybridus HOM05D000319 ORTHO05D005616 8.2e-127 457.2 255 85.5
Sopen09g027620 Solanum pennellii HOM05D000319 ORTHO05D005616 8.2e-127 457.2 253 86.6
SGA_v2.0_scaffold138G35283 Striga asiatica HOM05D000319 ORTHO05D005616 8.2e-127 457.2 294 80.6
BcaB01g02475 Brassica carinata HOM05D000319 ORTHO05D005616 1.1e-126 456.8 256 86.7
CiPaw.05G169400 Carya illinoinensis HOM05D000319 ORTHO05D005616 1.4e-126 456.4 255 87.1
Lj3g0018932 Lotus japonicus HOM05D000319 ORTHO05D005616 2.4e-126 455.7 255 85.5
ECA247G3951 Erigeron canadensis HOM05D000319 ORTHO05D005616 3.1e-126 455.3 256 86.3
PGSC0003DMG400019303 Solanum tuberosum HOM05D000319 ORTHO05D005616 3.1e-126 455.3 253 86.6
arahy.Tifrunner.gnm1.ann1.69SMRU Arachis hypogaea HOM05D000319 ORTHO05D005616 4.0e-126 454.9 255 86.7
Ca_01047_v3 Cicer arietinum L. HOM05D000319 ORTHO05D005616 4.0e-126 454.9 255 85.5
CAN.G1072.4 Capsicum annuum HOM05D000319 ORTHO05D005616 5.3e-126 454.5 254 85.0
Prupe.3G092100 Prunus persica HOM05D000319 ORTHO05D005616 5.3e-126 454.5 255 86.7
Sc17g0001020 Simmondsia chinensis HOM05D000319 ORTHO05D005616 5.3e-126 454.5 255 85.9
Sed0023498 Sechium edule HOM05D000319 ORTHO05D005616 6.9e-126 454.1 255 86.7
Thhalv10028900m.g Eutrema salsugineum HOM05D000319 ORTHO05D005616 9.0e-126 453.8 256 86.3
Nn3g19503 Nelumbo nucifera HOM05D000319 ORTHO05D005616 1.2e-125 453.4 252 85.7
CiPaw.06G060900 Carya illinoinensis HOM05D000319 ORTHO05D005616 2.0e-125 452.6 255 85.9
MD17G1215900 Malus domestica HOM05D000319 ORTHO05D005616 3.4e-125 451.8 255 86.3
ClCG07G012250 Citrullus lanatus HOM05D000319 ORTHO05D005616 5.8e-125 451.1 255 85.5
DCAR_018446 Daucus carota HOM05D000319 ORTHO05D005616 7.6e-125 450.7 255 85.5
EL10Ac5g10471 Beta vulgaris HOM05D000319 ORTHO05D005616 1.0e-124 450.3 255 83.5
Carub.0006s3456 Capsella rubella HOM05D000319 ORTHO05D005616 1.3e-124 449.9 256 85.2
CARHR250870 Cardamine hirsuta HOM05D000319 ORTHO05D005616 1.3e-124 449.9 256 85.5
MD17G1216000 Malus domestica HOM05D000319 ORTHO05D005616 1.3e-124 449.9 255 85.9
A03p30990 Brassica napus HOM05D000319 ORTHO05D000903 1.7e-124 449.5 253 86.2
CANSAT56G1819 Cannabis sativa HOM05D000319 ORTHO05D005616 1.7e-124 449.5 255 85.9
FvH4_6g29310 Fragaria vesca HOM05D000319 ORTHO05D005616 1.7e-124 449.5 255 85.9
Aqoxy5G00356 Aquilegia oxysepala HOM05D000319 ORTHO05D005616 2.2e-124 449.1 252 85.3
BolC9t53140H Brassica oleracea HOM05D000319 ORTHO05D005616 2.2e-124 449.1 256 85.5
PSO210G0711 Papaver somniferum HOM05D000319 ORTHO05D005616 2.2e-124 449.1 256 84.8
PSO832G0193 Papaver somniferum HOM05D000319 ORTHO05D005616 2.2e-124 449.1 256 84.8
TAR365G0186 Trochodendron aralioides HOM05D000319 ORTHO05D005616 2.2e-124 449.1 252 86.1
MELO3C017843.2 Cucumis melo HOM05D000319 ORTHO05D005616 2.9e-124 448.7 255 85.1
Sp6g02490 Schrenkiella parvula HOM05D000319 ORTHO05D005616 2.9e-124 448.7 256 84.8
Lalb_Chr22g0350801 Lupinus albus HOM05D000319 ORTHO05D005616 3.8e-124 448.4 255 85.9
AL6G50470 Arabidopsis lyrata HOM05D000319 ORTHO05D005616 4.9e-124 448.0 256 84.8
AUR62032260 Chenopodium quinoa HOM05D000319 ORTHO05D005616 4.9e-124 448.0 255 84.3
BcaC04g23998 Brassica carinata HOM05D000319 ORTHO05D000903 8.4e-124 447.2 253 85.8
C09p02100 Brassica napus HOM05D000319 ORTHO05D000903 8.4e-124 447.2 253 85.8
TPR.G37240 Trifolium pratense HOM05D000319 ORTHO05D005616 1.1e-123 446.8 255 83.9
AT4G02580 Arabidopsis thaliana HOM05D000319 ORTHO05D005616 1.4e-123 446.4 256 84.4
A09p02000 Brassica napus HOM05D000319 ORTHO05D000903 1.4e-123 446.4 253 85.4
BcaB01g02030 Brassica carinata HOM05D000319 ORTHO05D005616 2.5e-123 445.7 253 85.0
Gorai.001G242600 Gossypium raimondii HOM05D000319 ORTHO05D005616 2.5e-123 445.7 255 84.3
AUR62011945 Chenopodium quinoa HOM05D000319 ORTHO05D005616 4.2e-123 444.9 255 83.9
CsaV3_4G001900 Cucumis sativus L. HOM05D000319 ORTHO05D005616 5.5e-123 444.5 255 84.3
Sabra02G0036300 Salix brachista HOM05D000319 ORTHO05D005616 7.1e-123 444.1 306 73.5
Gohir.A07G208700 Gossypium hirsutum HOM05D000319 ORTHO05D005616 9.3e-123 443.7 255 83.9
Medtr2g104110 Medicago truncatula HOM05D000319 ORTHO05D005616 2.1e-122 442.6 255 83.5
FAN14G4091 Fragaria x ananassa HOM05D000319 ORTHO05D005616 3.5e-122 441.8 262 83.6
Hund09567 Selenicereus undatus HOM05D000319 ORTHO05D005616 3.5e-122 441.8 255 82.0
BolC3t16066H Brassica oleracea HOM05D000319 ORTHO05D005616 1.0e-121 440.3 255 84.7
BraA09t35850Z Brassica rapa HOM05D000319 ORTHO05D000903 1.0e-121 440.3 253 84.6
BraA03t12276Z Brassica rapa HOM05D000319 ORTHO05D000903 2.3e-121 439.1 253 84.6
Glyma.15G006400 Glycine max HOM05D000319 ORTHO05D005616 5.1e-121 438.0 255 82.4
Glyma.13G367000 Glycine max HOM05D000319 ORTHO05D005616 6.7e-121 437.6 255 82.0
Gohir.D07G214600 Gossypium hirsutum HOM05D000319 ORTHO05D005616 6.7e-121 437.6 255 82.7
BcaC01g06747 Brassica carinata HOM05D000319 ORTHO05D000903 8.7e-121 437.2 252 84.9
C03p37760 Brassica napus HOM05D000319 ORTHO05D005616 8.7e-121 437.2 252 84.9
Phvul.005G179400 Phaseolus vulgaris HOM05D000319 ORTHO05D005616 1.1e-120 436.8 255 82.0
Aa31LG5G2210 Aethionema arabicum HOM05D000319 ORTHO05D005616 1.9e-120 436.0 256 82.8
CDE06G1797 Ceratophyllum demersum HOM05D000319 ORTHO05D005616 1.9e-120 436.0 257 81.7
CDE07G0560 Ceratophyllum demersum HOM05D000319 ORTHO05D005616 9.7e-120 433.7 257 80.9
ATR0665G648 Amborella trichopoda HOM05D000319 ORTHO05D005616 4.1e-118 428.3 257 80.5
vmacro02626 Vaccinium macrocarpon HOM05D000319 ORTHO05D005616 5.9e-117 424.5 283 74.9
Os05g0509200 Oryza sativa ssp. japonica HOM05D000319 ORTHO05D005616 2.9e-116 422.2 250 79.2
Psat5g303080 Pisum sativum HOM05D000319 ORTHO05D005616 6.5e-116 421.0 255 80.4
Sed0021269 Sechium edule HOM05D000319 ORTHO05D005616 6.5e-116 421.0 255 81.2
HanXRQChr01g0006871 Helianthus annuus HOM05D000319 ORTHO05D005616 7.2e-115 417.5 259 81.1
FAN09G4049 Fragaria x ananassa HOM05D000319 ORTHO05D005616 9.4e-115 417.2 240 85.0
Zm00001eb292370 Zea mays HOM05D000319 ORTHO05D005616 3.0e-113 412.1 240 80.0
VMungo1080G0987 Vigna mungo HOM05D000319 ORTHO05D005616 1.5e-112 409.8 240 82.9
Dinv22483 Davidia involucrata HOM05D000319 ORTHO05D005616 1.1e-110 403.7 219 87.7
AagrBONN_evm.TU.Sc2ySwM_368.222 Anthoceros agrestis HOM05D000319 ORTHO05D005616 1.2e-106 390.2 229 79.5
SMO361G0598 Selaginella moellendorffii HOM05D000319 ORTHO05D005616 2.1e-106 389.4 230 79.1
Pp3c14_11220 Physcomitrium patens HOM05D000319 ORTHO05D005616 3.0e-105 385.6 238 75.6
Mapoly0103s0061 Marchantia polymorpha HOM05D000319 ORTHO05D005616 6.7e-105 384.4 250 72.0
Pp3c2_9810 Physcomitrium patens HOM05D000319 ORTHO05D005616 2.0e-104 382.9 250 72.8
MBI11_g38515_MAGBIO Magnolia biondii HOM05D000319 ORTHO05D005616 4.4e-104 381.7 259 74.9
arahy.Tifrunner.gnm1.ann1.0F4L5T Arachis hypogaea HOM05D000319 ORTHO05D005616 7.4e-104 380.9 255 76.1
Pp3c2_9813 Physcomitrium patens HOM05D000319 ORTHO05D005616 9.7e-104 380.6 238 75.2
Sabra05G0167100 Salix brachista HOM05D000319 ORTHO05D005616 5.9e-101 371.3 319 62.4
Duzib133G0192 Durio zibethinus HOM05D000319 ORTHO05D005616 2.2e-100 369.4 255 73.7
HPP92_010274 Vanilla planifolia HOM05D000319 ORTHO05D005616 8.5e-100 367.5 232 76.7
SEGI_22234 Sequoiadendron giganteum HOM05D000319 ORTHO05D005616 2.1e-98 362.8 199 84.9
HPP92_010249 Vanilla planifolia HOM05D000319 ORTHO05D005616 6.1e-98 361.3 232 76.7
CBR_g10938 Chara braunii HOM05D000319 ORTHO05D005616 3.0e-97 359.0 258 69.4
CBR_g36360 Chara braunii HOM05D000319 ORTHO05D005616 1.7e-95 353.2 258 68.2
FAN02G2104 Fragaria x ananassa HOM05D000319 ORTHO05D005616 1.1e-94 350.5 240 75.0
BolC2t09938H Brassica oleracea HOM05D000319 ORTHO05D005616 8.3e-87 324.3 250 67.2
Oeu058799.1 Olea europaea HOM05D000319 ORTHO05D005616 1.8e-86 323.2 161 95.7
PRCOL_00000415 Prasinoderma coloniale HOM05D000319 ORTHO05D005616 6.5e-84 314.7 248 60.9
Solyc09g065830.4 Solanum lycopersicum HOM05D000319 ORTHO05D005616 1.5e-83 313.5 162 90.1
QL03p046056 Quercus lobata HOM05D000319 ORTHO05D005616 4.2e-83 312.0 160 93.1
SGA_v2.0_scaffold580G53039 Striga asiatica HOM05D000319 ORTHO05D005616 5.7e-80 301.6 162 91.4
BcaB05g23646 Brassica carinata HOM05D000319 ORTHO05D005616 9.8e-80 300.8 285 60.4
HPP92_010181 Vanilla planifolia HOM05D000319 ORTHO05D005616 1.9e-75 286.6 158 87.3
BcaC03g16149 Brassica carinata HOM05D000319 ORTHO05D005616 5.5e-75 285.0 201 70.6
Lalb_Chr24g0395411 Lupinus albus HOM05D000319 ORTHO05D005616 1.2e-74 283.9 171 81.3
Cre10.g450400 Chlamydomonas reinhardtii HOM05D000319 ORTHO05D005616 2.0e-72 276.6 232 53.9
FAN05G4646 Fragaria x ananassa HOM05D000319 ORTHO05D005616 8.9e-65 251.1 268 54.1
C02p39270 Brassica napus HOM05D000319 ORTHO05D021913 8.1e-58 228.0 135 80.0
CAN.G2529.1 Capsicum annuum HOM05D000319 ORTHO05D005616 4.4e-56 222.2 117 89.7
Carub.0006s0058 Capsella rubella HOM05D000319 ORTHO05D005616 3.2e-54 216.1 115 90.4
Cfa025181 Carpinus fangiana HOM05D000319 ORTHO05D005616 2.1e-50 203.4 245 42.0
Lj1A57T50 Lonicera japonica HOM05D000319 ORTHO05D005616 7.6e-48 194.9 121 78.5
Oeu002275.1 Olea europaea HOM05D000319 ORTHO05D005616 2.9e-47 193.0 165 63.6
Peaxi162Scf00049g02221 Petunia axillaris HOM05D000319 ORTHO05D005616 2.9e-47 193.0 101 93.1
CSS0010087 Camellia sinensis var. sinensis HOM05D000319 ORTHO05D005616 3.5e-45 186.0 109 83.5
Haze_26296 Corylus avellana HOM05D000319 ORTHO05D005616 1.9e-43 180.3 233 44.2
Oeu058801.1 Olea europaea HOM05D000113 ORTHO05D010194 1.7e-39 167.2 100 79.0
Lalb_Chr24g0395401 Lupinus albus HOM05D000319 ORTHO05D005616 3.2e-38 162.9 84 86.9
Psat5g267520 Pisum sativum HOM05D000319 ORTHO05D005616 4.2e-38 162.5 83 86.7
Gohir.D03G127200 Gossypium hirsutum HOM05D000319 ORTHO05D005616 6.0e-37 158.7 89 84.3
Gorai.007G009700 Gossypium raimondii HOM05D000319 ORTHO05D005616 1.7e-36 157.1 83 88.0
Gohir.D08G101900 Gossypium hirsutum HOM05D000319 ORTHO05D005616 1.3e-34 151.0 89 80.9
Gorai.004G109900 Gossypium raimondii HOM05D000319 ORTHO05D005616 2.8e-34 149.8 89 79.8
Gohir.D11G034350 Gossypium hirsutum HOM05D000319 ORTHO05D015684 4.0e-33 146.0 75 89.3
Gorai.011G177500 Gossypium raimondii HOM05D000319 ORTHO05D015684 4.0e-33 146.0 89 78.7
QL03p046047 Quercus lobata HOM05D000319 ORTHO05D005616 1.7e-31 140.6 96 74.0
Gorai.007G037200 Gossypium raimondii HOM05D000319 ORTHO05D015684 2.9e-31 139.8 81 82.7
Gohir.D02G148240 Gossypium hirsutum HOM05D000319 ORTHO05D015684 4.9e-31 139.0 81 82.7
Gohir.A10G159900 Gossypium hirsutum HOM05D000319 ORTHO05D015684 1.2e-29 134.4 75 84.0
Gohir.A12G213400 Gossypium hirsutum HOM05D000319 ORTHO05D015684 1.2e-29 134.4 75 84.0
Gohir.D05G290500 Gossypium hirsutum HOM05D000319 ORTHO05D015684 1.2e-29 134.4 75 84.0
Gohir.D12G241200 Gossypium hirsutum HOM05D000319 ORTHO05D015684 1.2e-29 134.4 75 84.0
Gorai.008G258400 Gossypium raimondii HOM05D000319 ORTHO05D015684 2.1e-29 133.7 81 79.0
Gohir.A02G064600 Gossypium hirsutum HOM05D000319 ORTHO05D015684 4.6e-29 132.5 75 82.7
Psat2g121280 Pisum sativum HOM05D000319 ORTHO05D005616 3.9e-28 129.4 84 77.4
Gorai.005G095000 Gossypium raimondii HOM05D000319 ORTHO05D015684 1.5e-27 127.5 75 80.0
Gorai.003G111100 Gossypium raimondii HOM05D000319 ORTHO05D015684 2.8e-26 123.2 76 78.9
Gohir.D03G105033 Gossypium hirsutum HOM05D000319 ORTHO05D005616 3.6e-26 122.9 71 81.7
Psat4g011320 Pisum sativum HOM05D000319 ORTHO05D005616 3.1e-25 119.8 82 75.6
GSVIVG01013142001 Vitis vinifera HOM05D000319 ORTHO05D439463 2.5e-11 73.6 55 65.5
Lj1A57T51 Lonicera japonica HOM05D000319 ORTHO05D005616 3.7e-10 69.7 39 84.6


User provided reference genes

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