Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00465 Striga asiatica HOM05D007546 ORTHO05D009542 4.6e-152 541.2 274 100.0
SalBow4G0341 Salvia bowleyana HOM05D007546 ORTHO05D009542 1.9e-105 386.3 274 70.1
Migut.D00289 Erythranthe guttata HOM05D007546 ORTHO05D009542 4.7e-104 381.7 274 70.4
MSTRG.18229 Avicennia marina HOM05D007546 ORTHO05D009542 6.3e-101 371.3 274 69.7
Dinv34747 Davidia involucrata HOM05D007546 ORTHO05D009542 1.7e-82 310.1 277 59.2
CSS0011141 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 3.9e-82 308.9 279 59.5
Actinidia24887 Actinidia chinensis HOM05D007546 ORTHO05D009542 1.2e-80 303.9 277 57.0
Peaxi162Scf01622g00012 Petunia axillaris HOM05D007546 ORTHO05D009542 2.0e-78 296.6 274 55.1
DCAR_018417 Daucus carota HOM05D007546 ORTHO05D009542 5.8e-78 295.0 277 56.3
Cc01_g19550 Coffea canephora HOM05D007546 ORTHO05D009542 6.4e-77 291.6 270 58.5
TWI14G0110 Tripterygium wilfordii HOM05D007546 ORTHO05D009542 1.2e-75 287.3 269 56.1
Atru.chr5.1426 Acer truncatum HOM05D007546 ORTHO05D009542 7.8e-75 284.6 271 56.1
vmacro14926 Vaccinium macrocarpon HOM05D007546 ORTHO05D009542 2.3e-74 283.1 279 57.3
QL12p022024 Quercus lobata HOM05D007546 ORTHO05D009542 8.6e-74 281.2 264 56.8
HanXRQChr10g0282741 Helianthus annuus HOM05D007546 ORTHO05D009542 1.9e-73 280.0 269 55.4
GSVIVG01011126001 Vitis vinifera HOM05D007546 ORTHO05D009542 4.3e-73 278.9 268 56.7
Gohir.D08G076500 Gossypium hirsutum HOM05D007546 ORTHO05D009542 1.6e-72 276.9 268 56.0
Oeu012757.1 Olea europaea HOM05D007546 ORTHO05D009542 1.6e-72 276.9 212 68.4
unitig_61.g26331 Utricularia gibba HOM05D007546 ORTHO05D009542 4.7e-72 275.4 280 57.1
Duzib138G1282 Durio zibethinus HOM05D007546 ORTHO05D009542 1.4e-71 273.9 270 53.7
Hma1.2p1_0257F.1_g103530 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 8.9e-71 271.2 265 56.2
Lsat_1_v5_gn_9_3860 Lactuca sativa HOM05D007546 ORTHO05D009542 8.9e-71 271.2 264 55.7
Ciclev10023872m.g Citrus clementina HOM05D007546 ORTHO05D009542 4.4e-70 268.9 262 55.0
Sopen09g026830 Solanum pennellii HOM05D007546 ORTHO05D009542 9.9e-70 267.7 275 52.4
Solyc09g065110.4 Solanum lycopersicum HOM05D007546 ORTHO05D009542 1.3e-69 267.3 275 52.4
Nn2g12733 Nelumbo nucifera HOM05D007546 ORTHO05D009542 2.2e-69 266.5 264 51.9
Gohir.A08G068100 Gossypium hirsutum HOM05D007546 ORTHO05D009542 2.9e-69 266.2 272 52.6
PGSC0003DMG402012883 Solanum tuberosum HOM05D007546 ORTHO05D009542 2.9e-69 266.2 275 52.0
Sabra05G0158800 Salix brachista HOM05D007546 ORTHO05D009542 8.3e-69 264.6 272 53.7
COL.COLO4_09104 Corchorus olitorius HOM05D007546 ORTHO05D009542 1.1e-68 264.2 257 55.6
ECA247G1813 Erigeron canadensis HOM05D007546 ORTHO05D009542 2.7e-67 259.6 275 53.5
Gorai.004G081100 Gossypium raimondii HOM05D007546 ORTHO05D009542 3.5e-67 259.2 269 53.2
Aqoxy2G03310 Aquilegia oxysepala HOM05D007546 ORTHO05D009542 1.0e-66 257.7 254 53.5
CANSAT25G0166 Cannabis sativa HOM05D007546 ORTHO05D009542 1.0e-66 257.7 271 52.4
THA.LOC104801231 Tarenaya hassleriana HOM05D007546 ORTHO05D009542 1.3e-66 257.3 268 52.2
Carub.0001s0232 Capsella rubella HOM05D007546 ORTHO05D009542 1.7e-66 256.9 272 51.1
Lj2C1174G3 Lonicera japonica HOM05D007546 ORTHO05D009542 1.7e-66 256.9 259 53.7
MELO3C015843.2 Cucumis melo HOM05D007546 ORTHO05D009542 2.3e-66 256.5 271 50.9
CsaV3_7G028190 Cucumis sativus L. HOM05D007546 ORTHO05D009542 6.6e-66 255.0 271 50.2
Nitab4.5_0001028g0010 Nicotiana tabacum HOM05D007546 ORTHO05D009542 8.6e-66 254.6 249 54.2
Thecc.01G280300 Theobroma cacao HOM05D007546 ORTHO05D009542 8.6e-66 254.6 235 56.2
Eucgr.H01486 Eucalyptus grandis HOM05D007546 ORTHO05D009542 1.1e-65 254.2 265 51.7
Lj1g0009003 Lotus japonicus HOM05D007546 ORTHO05D009542 1.1e-65 254.2 264 50.4
Potri.005G208700 Populus trichocarpa HOM05D007546 ORTHO05D009542 1.5e-65 253.8 266 53.8
Psat3g064520 Pisum sativum HOM05D007546 ORTHO05D009542 1.9e-65 253.4 266 48.9
Sp1g02200 Schrenkiella parvula HOM05D007546 ORTHO05D009542 1.9e-65 253.4 268 51.9
AL1G12670 Arabidopsis lyrata HOM05D007546 ORTHO05D009542 4.3e-65 252.3 271 50.9
arahy.Tifrunner.gnm1.ann1.99CH68 Arachis hypogaea HOM05D007546 ORTHO05D009542 4.3e-65 252.3 277 50.9
Sed0013948 Sechium edule HOM05D007546 ORTHO05D009542 9.5e-65 251.1 268 50.0
BraA08t35641Z Brassica rapa HOM05D005387 ORTHO05D006711 1.2e-64 250.8 273 50.2
arahy.Tifrunner.gnm1.ann1.N7I060 Arachis hypogaea HOM05D007546 ORTHO05D009542 3.6e-64 249.2 277 50.2
arahy.Tifrunner.gnm1.ann1.P6ZKNU Arachis hypogaea HOM05D007546 ORTHO05D009542 8.1e-64 248.1 277 50.2
PGR119G0241 Punica granatum HOM05D007546 ORTHO05D009542 8.1e-64 248.1 260 51.2
Thhalv10008478m.g Eutrema salsugineum HOM05D007546 ORTHO05D009542 6.8e-63 245.0 270 49.6
C08p00480 Brassica napus HOM05D005387 ORTHO05D006711 1.5e-62 243.8 264 50.8
PSO170G1280 Papaver somniferum HOM05D007546 ORTHO05D009542 1.5e-62 243.8 266 50.0
MD11G1286600 Malus domestica HOM05D007546 ORTHO05D009542 2.0e-62 243.4 253 51.0
VMungo1383G0744 Vigna mungo HOM05D007546 ORTHO05D009542 5.8e-62 241.9 258 50.0
ClCG09G006970 Citrullus lanatus HOM05D007546 ORTHO05D009542 7.6e-62 241.5 295 47.1
Hund05346 Selenicereus undatus HOM05D007546 ORTHO05D009542 7.6e-62 241.5 266 47.7
Ca_08577_v3 Cicer arietinum L. HOM05D007546 ORTHO05D009542 9.9e-62 241.1 254 50.0
Medtr7g094790 Medicago truncatula HOM05D007546 ORTHO05D009542 9.9e-62 241.1 267 47.6
Haze_04718 Corylus avellana HOM05D007546 ORTHO05D009542 8.4e-61 238.0 259 52.9
Lalb_Chr01g0013761 Lupinus albus HOM05D007546 ORTHO05D009542 8.4e-61 238.0 259 50.6
BcaC07g36978 Brassica carinata HOM05D005387 ORTHO05D006711 4.1e-60 235.7 263 49.8
FvH4_2g23671 Fragaria vesca HOM05D007546 ORTHO05D009542 4.1e-60 235.7 256 49.2
AUR62036823 Chenopodium quinoa HOM05D007546 ORTHO05D009542 7.1e-60 235.0 269 49.1
Hma1.2p1_0257F.1_g103520 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 9.2e-60 234.6 215 60.0
EL10Ac7g17228 Beta vulgaris HOM05D007546 ORTHO05D009542 3.5e-59 232.6 274 47.8
A08p37430 Brassica napus HOM05D005387 ORTHO05D006711 1.0e-58 231.1 298 45.0
Manes.01G208300 Manihot esculenta HOM05D007546 ORTHO05D009542 3.9e-58 229.2 209 59.3
Aa31LG1G9350 Aethionema arabicum HOM05D007546 ORTHO05D009542 4.3e-57 225.7 271 47.6
RcHm_v2.0_Chr6g0291141 Rosa chinensis HOM05D007546 ORTHO05D009542 1.2e-56 224.2 265 47.2
Prupe.8G241900 Prunus persica HOM05D007546 ORTHO05D009542 1.1e-55 221.1 264 48.9
CAN.G242.7 Capsicum annuum HOM05D007546 ORTHO05D009542 9.0e-55 218.0 219 54.8
CARHR002520 Cardamine hirsuta HOM05D007546 ORTHO05D009542 9.9e-54 214.5 221 53.4
Os05g0251400 Oryza sativa ssp. japonica HOM05D007546 ORTHO05D009542 1.1e-52 211.1 262 43.9
HPP92_010632 Vanilla planifolia HOM05D007546 ORTHO05D009542 4.2e-52 209.1 272 44.1
TPR.G6147 Trifolium pratense HOM05D007546 ORTHO05D009542 5.4e-52 208.8 224 50.0
Cpa.g.sc52.28 Carica papaya HOM05D007546 ORTHO05D009542 7.1e-52 208.4 182 59.9
AUR62038619 Chenopodium quinoa HOM05D007546 ORTHO05D009542 1.6e-51 207.2 286 43.7
Nitab4.5_0010448g0030 Nicotiana tabacum HOM05D007546 ORTHO05D009542 6.0e-51 205.3 249 47.8
MBI19_g16657_MAGBIO Magnolia biondii HOM05D007546 ORTHO05D009542 1.7e-50 203.8 267 44.2
FAN20G2110 Fragaria x ananassa HOM05D005331 ORTHO05D007596 4.3e-49 199.1 230 47.8
FAN24G2921 Fragaria x ananassa HOM05D005331 ORTHO05D007596 1.3e-48 197.6 225 48.4
Ah.15g091950 Amaranthus hybridus HOM05D007546 ORTHO05D009542 1.6e-48 197.2 224 48.7
Sc05g0004940 Simmondsia chinensis HOM05D007546 ORTHO05D009542 1.8e-47 193.7 210 51.9
FAN15G1459 Fragaria x ananassa HOM05D005331 ORTHO05D007596 4.5e-46 189.1 257 43.2
AT1G03180 Arabidopsis thaliana HOM05D007546 ORTHO05D009542 5.8e-46 188.7 184 52.7
Zm00001eb132020 Zea mays HOM05D007546 ORTHO05D009542 7.6e-46 188.3 268 40.3
ATR0626G078 Amborella trichopoda HOM05D007546 ORTHO05D009542 2.9e-45 186.4 260 42.7
AUR62043164 Chenopodium quinoa HOM05D007546 ORTHO05D009542 6.9e-39 165.2 171 53.2
Glyma.03G153000 Glycine max HOM05D007546 ORTHO05D009542 1.3e-37 161.0 186 45.7
Phvul.001G150400 Phaseolus vulgaris HOM05D007546 ORTHO05D009542 2.1e-35 153.7 176 46.0
Potri.002G053801 Populus trichocarpa HOM05D007546 ORTHO05D009542 1.0e-29 134.8 129 58.9
Mapoly0002s0121 Marchantia polymorpha HOM05D007546 ORTHO05D009542 7.9e-19 98.6 251 31.5
Glyma.19G155400 Glycine max HOM05D007546 ORTHO05D009542 1.8e-18 97.4 104 47.1
SalBow8G3203 Salvia bowleyana HOM05D007546 ORTHO05D009542 2.2e-16 90.5 59 71.2
SalBow4G3151 Salvia bowleyana HOM05D007546 ORTHO05D009542 1.8e-15 87.4 59 69.5
CSS0034697 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 1.4e-12 77.8 86 51.2
SalBow1G5735 Salvia bowleyana HOM05D007546 ORTHO05D009542 1.4e-12 77.8 59 64.4
SalBow1G3448 Salvia bowleyana HOM05D007546 ORTHO05D009542 7.9e-11 72.0 92 46.7


User provided reference genes

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