Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold19G08907 Striga asiatica HOM05D004480 ORTHO05D005546 1.7e-263 912.1 477 100.0
SGA_v2.0_scaffold25G11023 Striga asiatica HOM05D004480 ORTHO05D005546 4.8e-229 797.7 485 87.6
MSTRG.22059 Avicennia marina HOM05D004480 ORTHO05D005546 6.5e-210 734.2 493 77.9
Migut.N03010 Erythranthe guttata HOM05D004480 ORTHO05D005546 6.9e-204 714.1 479 78.9
SalBow1G2458 Salvia bowleyana HOM05D004480 ORTHO05D005546 1.4e-201 706.4 480 76.7
SalBow6G1632 Salvia bowleyana HOM05D004480 ORTHO05D005546 6.1e-200 701.0 468 79.5
Cc03_g16200 Coffea canephora HOM05D004480 ORTHO05D005546 2.0e-195 686.0 484 76.0
Manes.17G005700 Manihot esculenta HOM05D004480 ORTHO05D005546 7.2e-193 677.6 477 73.6
Actinidia18384 Actinidia chinensis HOM05D004480 ORTHO05D005546 4.7e-192 674.9 477 73.4
QL11p020579 Quercus lobata HOM05D004480 ORTHO05D005546 2.0e-190 669.5 476 72.9
Oeu019179.1 Olea europaea HOM05D004480 ORTHO05D005546 2.6e-190 669.1 537 67.8
Thecc.05G221800 Theobroma cacao HOM05D004480 ORTHO05D005546 4.4e-190 668.3 480 75.2
Hma1.2p1_0513F.1_g169740 Hydrangea macrophylla HOM05D004480 ORTHO05D005546 9.7e-190 667.2 480 73.1
CSS0010781 Camellia sinensis var. sinensis HOM05D004480 ORTHO05D005546 5.9e-187 657.9 484 72.1
CiPaw.01G203500 Carya illinoinensis HOM05D004480 ORTHO05D005546 2.2e-186 656.0 481 70.7
Gohir.D08G023800 Gossypium hirsutum HOM05D004480 ORTHO05D005546 2.9e-186 655.6 478 73.6
GSVIVG01038269001 Vitis vinifera HOM05D004480 ORTHO05D005546 2.5e-185 652.5 478 71.8
RcHm_v2.0_Chr1g0334711 Rosa chinensis HOM05D004480 ORTHO05D005546 5.5e-185 651.4 481 69.4
MD01G1035500 Malus domestica HOM05D004480 ORTHO05D005546 9.4e-185 650.6 479 71.2
Gohir.A08G013400 Gossypium hirsutum HOM05D004480 ORTHO05D005546 1.2e-184 650.2 478 73.2
Gorai.004G019100 Gossypium raimondii HOM05D004480 ORTHO05D005546 1.2e-184 650.2 478 72.8
Duzib128G0969 Durio zibethinus HOM05D004480 ORTHO05D005546 1.6e-184 649.8 477 71.9
Cfa008538 Carpinus fangiana HOM05D004480 ORTHO05D005546 2.7e-184 649.0 481 70.1
RcHm_v2.0_Chr7g0210541 Rosa chinensis HOM05D004480 ORTHO05D005546 3.6e-184 648.7 481 69.4
Atru.chr11.1453 Acer truncatum HOM05D004480 ORTHO05D005546 1.0e-183 647.1 481 70.5
Atru.chr11.1483 Acer truncatum HOM05D004480 ORTHO05D005546 1.0e-183 647.1 481 70.5
CsaV3_3G003300 Cucumis sativus L. HOM05D004480 ORTHO05D005546 1.0e-183 647.1 484 71.1
vmacro20035 Vaccinium macrocarpon HOM05D004480 ORTHO05D005546 1.0e-183 647.1 486 71.0
MD15G1320300 Malus domestica HOM05D004480 ORTHO05D005546 1.8e-183 646.4 479 70.4
Ca_17076_v3 Cicer arietinum L. HOM05D004480 ORTHO05D005546 3.0e-183 645.6 477 71.3
Nn7g35785 Nelumbo nucifera HOM05D004480 ORTHO05D005546 3.0e-183 645.6 478 70.9
MELO3C013997.2 Cucumis melo HOM05D004480 ORTHO05D005546 6.7e-183 644.4 484 70.9
vmacro00734 Vaccinium macrocarpon HOM05D004480 ORTHO05D005546 6.7e-183 644.4 519 66.9
FAN03G0050 Fragaria x ananassa HOM05D004480 ORTHO05D005546 1.1e-182 643.7 485 69.1
Sopen01g003100 Solanum pennellii HOM05D004480 ORTHO05D005546 1.1e-182 643.7 480 71.9
FAN01G1951 Fragaria x ananassa HOM05D004480 ORTHO05D005546 2.0e-182 642.9 477 70.0
MBI07_g30868_MAGBIO Magnolia biondii HOM05D004480 ORTHO05D005546 3.3e-182 642.1 507 68.4
Ciclev10008180m.g Citrus clementina HOM05D004480 ORTHO05D005546 9.7e-182 640.6 477 69.8
FvH4_4g10760 Fragaria vesca HOM05D004480 ORTHO05D005546 1.8e-180 636.3 477 68.1
arahy.Tifrunner.gnm1.ann1.0BX3U4 Arachis hypogaea HOM05D004480 ORTHO05D005546 2.4e-180 636.0 477 71.7
PGR083G0026 Punica granatum HOM05D004480 ORTHO05D005546 3.1e-180 635.6 477 70.0
PGR119G0799 Punica granatum HOM05D004480 ORTHO05D005546 3.1e-180 635.6 478 69.5
Prupe.5G084300 Prunus persica HOM05D004480 ORTHO05D005546 4.1e-180 635.2 495 67.5
Solyc01g007120.3 Solanum lycopersicum HOM05D004480 ORTHO05D005546 4.1e-180 635.2 477 70.9
HanXRQChr15g0465141 Helianthus annuus HOM05D004480 ORTHO05D005546 7.0e-180 634.4 487 69.8
Sed0006001 Sechium edule HOM05D004480 ORTHO05D005546 7.0e-180 634.4 485 69.9
FAN12G3644 Fragaria x ananassa HOM05D004480 ORTHO05D005546 9.1e-180 634.0 477 68.1
THA.LOC104827565 Tarenaya hassleriana HOM05D004480 ORTHO05D005546 1.2e-179 633.6 481 69.9
HanXRQChr14g0458331 Helianthus annuus HOM05D004480 ORTHO05D005546 1.6e-179 633.3 486 70.0
Potri.017G001100 Populus trichocarpa HOM05D004480 ORTHO05D005546 3.5e-179 632.1 477 71.3
Lj1g0018422 Lotus japonicus HOM05D004480 ORTHO05D005546 4.5e-179 631.7 477 71.3
Glyma.18G043300 Glycine max HOM05D004480 ORTHO05D005546 1.3e-178 630.2 479 70.4
BraA03t13931Z Brassica rapa HOM05D004480 ORTHO05D005546 1.7e-178 629.8 479 69.3
Eucgr.H00240 Eucalyptus grandis HOM05D004480 ORTHO05D005546 5.0e-178 628.2 479 69.9
A03p48230 Brassica napus HOM05D004480 ORTHO05D005546 8.5e-178 627.5 479 68.7
PGSC0003DMG400021321 Solanum tuberosum HOM05D004480 ORTHO05D005546 8.5e-178 627.5 477 70.2
Sc03g0007800 Simmondsia chinensis HOM05D004480 ORTHO05D005546 1.5e-177 626.7 477 72.1
BcaB01g00536 Brassica carinata HOM05D004480 ORTHO05D005546 1.9e-177 626.3 479 69.5
Hund12181 Selenicereus undatus HOM05D004480 ORTHO05D005546 1.9e-177 626.3 478 68.8
TWI74G1000 Tripterygium wilfordii HOM05D004480 ORTHO05D005546 7.2e-177 624.4 478 68.0
Dinv39175 Davidia involucrata HOM05D004480 ORTHO05D005546 1.6e-176 623.2 462 70.8
Medtr4g094615 Medicago truncatula HOM05D004480 ORTHO05D005546 2.7e-176 622.5 477 67.9
FAN06G1845 Fragaria x ananassa HOM05D004480 ORTHO05D005546 6.1e-176 621.3 469 68.9
Phvul.001G227600 Phaseolus vulgaris HOM05D004480 ORTHO05D005546 1.0e-175 620.5 481 70.5
BcaC06g33042 Brassica carinata HOM05D004480 ORTHO05D005546 1.4e-175 620.2 479 68.7
TPR.G4936 Trifolium pratense HOM05D004480 ORTHO05D005546 1.4e-175 620.2 477 69.6
CANSAT21G2297 Cannabis sativa HOM05D004480 ORTHO05D005546 1.8e-175 619.8 480 69.0
BraA01t02261Z Brassica rapa HOM05D004480 ORTHO05D005546 2.3e-175 619.4 479 68.1
C07p46260 Brassica napus HOM05D004480 ORTHO05D005546 3.0e-175 619.0 479 68.9
Lalb_Chr08g0233091 Lupinus albus HOM05D004480 ORTHO05D005546 3.0e-175 619.0 479 70.4
A01p23550 Brassica napus HOM05D004480 ORTHO05D005546 2.6e-174 615.9 477 67.5
AL5G31690 Arabidopsis lyrata HOM05D004480 ORTHO05D005546 3.4e-174 615.5 479 68.3
BolC1t02850H Brassica oleracea HOM05D004480 ORTHO05D005546 7.5e-174 614.4 477 67.9
BcaNung06395 Brassica carinata HOM05D004480 ORTHO05D005546 9.8e-174 614.0 474 69.0
C01p29210 Brassica napus HOM05D004480 ORTHO05D005546 9.8e-174 614.0 474 69.0
BraA09t39892Z Brassica rapa HOM05D004480 ORTHO05D005546 9.8e-174 614.0 480 68.1
Sp5g10950 Schrenkiella parvula HOM05D004480 ORTHO05D005546 1.7e-173 613.2 479 68.5
TAR626G1520 Trochodendron aralioides HOM05D004480 ORTHO05D005546 1.7e-173 613.2 507 65.7
Nitab4.5_0002844g0040 Nicotiana tabacum HOM05D004480 ORTHO05D005546 4.8e-173 611.7 495 65.9
A09p44300 Brassica napus HOM05D004480 ORTHO05D005546 6.3e-173 611.3 479 68.3
FAN12G1968 Fragaria x ananassa HOM05D004480 ORTHO05D005546 8.3e-173 610.9 462 67.5
Dinv41802 Davidia involucrata HOM05D004480 ORTHO05D005546 1.1e-172 610.5 398 77.1
BcaNung00392 Brassica carinata HOM05D004480 ORTHO05D005546 2.0e-171 606.3 479 67.4
VMungo1383G0315 Vigna mungo HOM05D004480 ORTHO05D005546 4.5e-171 605.1 480 68.8
BolC7t45142H Brassica oleracea HOM05D004480 ORTHO05D005546 1.3e-170 603.6 477 66.9
Carub.0005s1764 Capsella rubella HOM05D004480 ORTHO05D005546 2.2e-170 602.8 478 69.5
CARHR160850 Cardamine hirsuta HOM05D004480 ORTHO05D005546 5.0e-170 601.7 479 68.5
Rhsim09G0001300 Rhododendron simsii HOM05D004480 ORTHO05D005546 2.5e-169 599.4 437 71.9
DCAR_011737 Daucus carota HOM05D004480 ORTHO05D005546 4.2e-169 598.6 528 62.5
Peaxi162Scf00586g00512 Petunia axillaris HOM05D004480 ORTHO05D005546 5.5e-169 598.2 473 67.7
TAR623G1647 Trochodendron aralioides HOM05D004480 ORTHO05D005546 5.5e-169 598.2 504 64.9
THA.LOC104802357 Tarenaya hassleriana HOM05D004480 ORTHO05D005546 7.2e-169 597.8 479 69.1
ATR0743G007 Amborella trichopoda HOM05D004480 ORTHO05D005546 2.1e-168 596.3 491 65.2
unitig_62.g23773 Utricularia gibba HOM05D004480 ORTHO05D005546 2.7e-168 595.9 514 65.2
Sed0005158 Sechium edule HOM05D004480 ORTHO05D005546 1.0e-167 594.0 399 75.9
Thhalv10010355m.g Eutrema salsugineum HOM05D004480 ORTHO05D005546 5.2e-167 591.7 477 66.7
Os01g0888700 Oryza sativa ssp. japonica HOM05D004480 ORTHO05D005546 5.2e-167 591.7 498 65.7
Sabra17G0005500 Salix brachista HOM05D000001 ORTHO05D005546 5.2e-167 591.7 550 59.6
FvH4_7g06440 Fragaria vesca HOM05D004480 ORTHO05D005546 6.8e-167 591.3 376 77.1
VMungo1309G1911 Vigna mungo HOM05D004480 ORTHO05D005546 2.6e-166 589.3 478 67.2
ECA248G1292 Erigeron canadensis HOM05D004480 ORTHO05D005546 3.4e-166 589.0 471 68.4
Nitab4.5_0002686g0020 Nicotiana tabacum HOM05D004480 ORTHO05D005546 1.7e-165 586.6 495 64.0
arahy.Tifrunner.gnm1.ann1.JT43NG Arachis hypogaea HOM05D004480 ORTHO05D005546 3.7e-165 585.5 477 67.1
Psat7g090480 Pisum sativum HOM05D004480 ORTHO05D005546 6.3e-165 584.7 413 72.6
FAN10G1488 Fragaria x ananassa HOM05D004480 ORTHO05D005546 3.5e-163 578.9 469 65.9
Glyma.11G213400 Glycine max HOM05D004480 ORTHO05D005546 3.5e-163 578.9 363 80.4
AT3G51270 Arabidopsis thaliana HOM05D004480 ORTHO05D005546 5.9e-163 578.2 479 67.0
COL.COLO4_23990 Corchorus olitorius HOM05D004480 ORTHO05D005546 1.0e-162 577.4 483 65.6
Zm00001eb145320 Zea mays HOM05D004480 ORTHO05D005546 6.6e-162 574.7 492 65.4
HanXRQChr15g0464981 Helianthus annuus HOM05D004480 ORTHO05D005546 1.5e-161 573.5 333 84.4
Zm00001eb365940 Zea mays HOM05D004480 ORTHO05D005546 4.7e-160 568.5 484 65.3
Aa31LG1G7840 Aethionema arabicum HOM05D004480 ORTHO05D005546 1.4e-159 567.0 460 67.2
C08p26540 Brassica napus HOM05D004480 ORTHO05D005546 4.0e-159 565.5 483 63.1
BolC8t50268H Brassica oleracea HOM05D004480 ORTHO05D005546 8.9e-159 564.3 493 62.7
PSO675G8718 Papaver somniferum HOM05D004480 ORTHO05D005546 1.5e-158 563.5 479 64.9
PSO732G0488 Papaver somniferum HOM05D004480 ORTHO05D005546 1.7e-157 560.1 479 65.3
CAN.G574.17 Capsicum annuum HOM05D004480 ORTHO05D005546 3.5e-155 552.4 447 67.8
Cpa.g.sc9.237 Carica papaya HOM05D004480 ORTHO05D005546 1.3e-154 550.4 479 62.2
Haze_11102 Corylus avellana HOM05D004480 ORTHO05D005546 7.3e-153 544.7 454 63.9
BcaC09g50090 Brassica carinata HOM05D004480 ORTHO05D005546 6.2e-152 541.6 413 67.8
Duzib177G0198 Durio zibethinus HOM05D004480 ORTHO05D005546 6.2e-152 541.6 409 72.6
Lsat_1_v5_gn_5_33821 Lactuca sativa HOM05D004480 ORTHO05D005546 1.0e-151 540.8 474 66.0
Mapoly0052s0036 Marchantia polymorpha HOM05D004480 ORTHO05D005546 2.2e-149 533.1 470 58.9
AUR62001702 Chenopodium quinoa HOM05D004480 ORTHO05D005546 9.2e-148 527.7 477 61.4
Oeu061379.1 Olea europaea HOM05D004480 ORTHO05D005546 4.6e-147 525.4 274 92.0
Lju124A7T24 Lonicera japonica HOM05D004480 ORTHO05D005546 6.6e-146 521.5 279 89.2
Aqoxy2G00126 Aquilegia oxysepala HOM05D004480 ORTHO05D005546 1.2e-142 510.8 500 56.6
SMO203G0211 Selaginella moellendorffii HOM05D004480 ORTHO05D005546 2.1e-139 500.0 332 72.6
Pp3c20_22360 Physcomitrium patens HOM05D004480 ORTHO05D005546 1.0e-138 497.7 461 57.0
AagrBONN_evm.TU.Sc2ySwM_228.3019 Anthoceros agrestis HOM05D004480 ORTHO05D005546 3.8e-133 479.2 330 70.3
CDE02G2467 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 7.8e-131 471.5 440 58.2
CDE09G0719 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 5.1e-130 468.8 393 62.6
SHI53263 Sapria himalayana HOM05D004480 ORTHO05D005546 2.5e-129 466.5 337 69.4
ClCG10G003270 Citrullus lanatus HOM05D004480 ORTHO05D005546 3.6e-128 462.6 571 51.5
ClCG00G001030 Citrullus lanatus HOM05D004480 ORTHO05D005546 5.2e-127 458.8 425 60.9
CBR_g22944 Chara braunii HOM05D004480 ORTHO05D005546 9.3e-124 448.0 276 75.4
CDE09G0674 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 2.3e-122 443.4 453 55.8
CDE02G0168 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 5.3e-119 432.2 354 63.6
AUR62020079 Chenopodium quinoa HOM05D004480 ORTHO05D005546 1.7e-117 427.2 483 53.0
CDE09G1409 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 6.0e-115 418.7 446 54.0
SEGI_41177 Sequoiadendron giganteum HOM05D004480 ORTHO05D005546 6.0e-107 392.1 403 54.8
PRCOL_00001861 Prasinoderma coloniale HOM05D004480 ORTHO05D005546 2.2e-101 373.6 410 50.2
MCO09G317 Micromonas commoda HOM05D004480 ORTHO05D005546 5.5e-100 369.0 337 56.7
CDE09G0134 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 2.1e-99 367.1 287 65.5
Migut.O00494 Erythranthe guttata HOM05D004480 ORTHO05D005546 1.8e-95 354.0 478 50.8
Cre03.g159900 Chlamydomonas reinhardtii HOM05D004480 ORTHO05D005546 1.1e-76 291.6 260 56.2
Ciclev10020879m.g Citrus clementina HOM05D004480 ORTHO05D005546 5.9e-62 242.7 468 39.3
Cfa009489 Carpinus fangiana HOM05D004480 ORTHO05D005546 1.1e-55 221.9 386 37.3
HPP92_020625 Vanilla planifolia HOM05D004480 ORTHO05D005546 3.4e-41 173.7 249 45.4
ClCG00G000020 Citrullus lanatus HOM05D004480 ORTHO05D005546 1.4e-39 168.3 401 33.7
SMO327G0006 Selaginella moellendorffii HOM05D004480 ORTHO05D005546 4.6e-38 163.3 120 70.0
Oeu061378.1 Olea europaea HOM05D004480 ORTHO05D005546 2.0e-30 137.9 205 49.3
SEGI_14248 Sequoiadendron giganteum HOM05D004480 ORTHO05D005546 3.0e-29 134.0 81 77.8
Zm00001eb233680 Zea mays HOM05D009386 ORTHO05D011419 5.6e-28 129.8 170 48.8
FAN07G0363 Fragaria x ananassa HOM05D004480 ORTHO05D005546 2.7e-22 110.9 190 40.5
Zm00001eb393850 Zea mays HOM05D009386 ORTHO05D011419 7.3e-20 102.8 107 56.1
Lju124A7T25 Lonicera japonica HOM05D004480 ORTHO05D005546 1.2e-19 102.1 217 39.6
Zm00001eb011520 Zea mays HOM05D009386 ORTHO05D011419 2.1e-19 101.3 144 47.9
Medtr8g090145 Medicago truncatula HOM05D004480 ORTHO05D005546 5.2e-10 70.1 194 34.5
MCO12G200 Micromonas commoda HOM05D003858 ORTHO05D005878 2.6e-09 67.8 208 27.9
Medtr4g087670 Medicago truncatula HOM05D004480 ORTHO05D263555 4.6e-06 57.0 52 48.1


User provided reference genes

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