Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold19G08893 Striga asiatica HOM05D000324 ORTHO05D005036 1.1e-186 656.4 317 100.0
SGA_v2.0_scaffold114G31867 Striga asiatica HOM05D004313 ORTHO05D005036 3.4e-66 256.1 180 73.3
SGA_v2.0_scaffold149G36520 Striga asiatica HOM05D000884 ORTHO05D002404 7.2e-32 142.1 127 59.1
Hund14223 Selenicereus undatus HOM05D000324 ORTHO05D001014 3.5e-10 70.1 76 44.7
SGA_v2.0_scaffold169G38721 Striga asiatica HOM05D002942 ORTHO05D003270 1.7e-09 67.8 194 30.4
PSO782G0506 Papaver somniferum HOM05D000324 ORTHO05D001014 2.3e-09 67.4 109 34.9
Oeu034336.1 Olea europaea HOM05D000324 ORTHO05D001014 8.6e-09 65.5 109 33.9
Sopen08g030550 Solanum pennellii HOM05D000324 ORTHO05D001014 1.5e-08 64.7 108 31.5
Aa31LG6G7060 Aethionema arabicum HOM05D000324 ORTHO05D001014 2.5e-08 63.9 109 31.2
PSO063G2527 Papaver somniferum HOM05D000324 ORTHO05D001014 2.5e-08 63.9 109 33.0
PSO170G0164 Papaver somniferum HOM05D000324 ORTHO05D001014 2.5e-08 63.9 109 33.0
BolC2t10228H Brassica oleracea HOM05D000324 ORTHO05D001014 3.3e-08 63.5 123 30.9
Thhalv10024614m.g Eutrema salsugineum HOM05D000324 ORTHO05D001014 3.3e-08 63.5 109 32.1
Migut.A00645 Erythranthe guttata HOM05D000324 ORTHO05D001014 4.3e-08 63.2 108 35.2
Sabra03G0100800 Salix brachista HOM05D000324 ORTHO05D001014 4.3e-08 63.2 109 32.1
BcaC09g50942 Brassica carinata HOM05D000324 ORTHO05D001014 5.6e-08 62.8 109 31.2
A01p15150 Brassica napus HOM05D000324 ORTHO05D001014 5.6e-08 62.8 109 31.2
C01p19050 Brassica napus HOM05D000324 ORTHO05D001014 5.6e-08 62.8 109 31.2
BolC1t01831H Brassica oleracea HOM05D000324 ORTHO05D001014 5.6e-08 62.8 109 31.2
BraA01t01453Z Brassica rapa HOM05D000324 ORTHO05D001014 5.6e-08 62.8 109 31.2
Lsat_1_v5_gn_6_84040 Lactuca sativa HOM05D000324 ORTHO05D001014 5.6e-08 62.8 110 31.8
Lalb_Chr09g0320661 Lupinus albus HOM05D000324 ORTHO05D001014 5.6e-08 62.8 109 32.1
MSTRG.11926 Avicennia marina HOM05D000324 ORTHO05D001014 7.3e-08 62.4 108 34.3
BcaB05g23865 Brassica carinata HOM05D000324 ORTHO05D001014 7.3e-08 62.4 123 30.1
BcaNung01091 Brassica carinata HOM05D000324 ORTHO05D001014 7.3e-08 62.4 109 31.2
A02p26400 Brassica napus HOM05D000324 ORTHO05D001014 7.3e-08 62.4 123 30.1
BraA02t07642Z Brassica rapa HOM05D000324 ORTHO05D001014 7.3e-08 62.4 123 30.1
ATR0188G034 Amborella trichopoda HOM05D000324 ORTHO05D001014 9.5e-08 62.0 109 33.0
Potri.003G139700 Populus trichocarpa HOM05D000324 ORTHO05D001014 9.5e-08 62.0 109 31.2
Sabra01G0068300 Salix brachista HOM05D000324 ORTHO05D001014 9.5e-08 62.0 109 33.0
SGA_v2.0_scaffold305G47968 Striga asiatica HOM05D000324 ORTHO05D001014 9.5e-08 62.0 132 31.8
AL7G29510 Arabidopsis lyrata HOM05D000324 ORTHO05D001014 1.2e-07 61.6 109 31.2
BcaC03g16375 Brassica carinata HOM05D000324 ORTHO05D001014 1.2e-07 61.6 123 30.1
C02p41960 Brassica napus HOM05D000324 ORTHO05D001014 1.2e-07 61.6 123 30.1
CARHR046520 Cardamine hirsuta HOM05D000324 ORTHO05D001014 1.2e-07 61.6 105 34.3
Ciclev10019200m.g Citrus clementina HOM05D000324 ORTHO05D001014 1.6e-07 61.2 109 30.3
HanXRQChr03g0083551 Helianthus annuus HOM05D000324 ORTHO05D001014 1.6e-07 61.2 110 30.9
AT4G23850 Arabidopsis thaliana HOM05D000324 ORTHO05D001014 2.1e-07 60.8 109 30.3
CARHR255580 Cardamine hirsuta HOM05D000324 ORTHO05D001014 2.1e-07 60.8 112 32.1
Solyc08g082280.4 Solanum lycopersicum HOM05D000324 ORTHO05D001014 2.1e-07 60.8 108 30.6
AT1G64400 Arabidopsis thaliana HOM05D000324 ORTHO05D001014 2.8e-07 60.5 105 34.3
Cc08_g16030 Coffea canephora HOM05D000324 ORTHO05D001014 2.8e-07 60.5 108 32.4
Lsat_1_v5_gn_6_12401 Lactuca sativa HOM05D000324 ORTHO05D001014 2.8e-07 60.5 109 32.1
Prupe.5G118400 Prunus persica HOM05D000324 ORTHO05D001014 2.8e-07 60.5 109 31.2
SalBow1G4222 Salvia bowleyana HOM05D000324 ORTHO05D001014 2.8e-07 60.5 108 33.3
TWI15G0387 Tripterygium wilfordii HOM05D000324 ORTHO05D001014 2.8e-07 60.5 109 29.4
Ah.12g052530 Amaranthus hybridus HOM05D000324 ORTHO05D001014 3.6e-07 60.1 107 32.7
CSS0016601 Camellia sinensis var. sinensis HOM05D000324 ORTHO05D001014 3.6e-07 60.1 109 31.2
DCAR_029887 Daucus carota HOM05D000324 ORTHO05D001014 3.6e-07 60.1 108 30.6
Nitab4.5_0001231g0100 Nicotiana tabacum HOM05D000324 ORTHO05D001014 3.6e-07 60.1 108 31.5
Potri.001G091900 Populus trichocarpa HOM05D000324 ORTHO05D001014 3.6e-07 60.1 109 31.2
Aqoxy5G04224 Aquilegia oxysepala HOM05D000324 ORTHO05D001014 4.7e-07 59.7 110 30.9
Carub.0002s0037 Capsella rubella HOM05D000324 ORTHO05D001014 4.7e-07 59.7 105 34.3
Glyma.01G225200 Glycine max HOM05D000324 ORTHO05D001014 4.7e-07 59.7 109 31.2
SGA_v2.0_scaffold111G31413 Striga asiatica HOM05D000324 ORTHO05D001014 4.7e-07 59.7 108 31.5
Aa31LG9G11160 Aethionema arabicum HOM05D000324 ORTHO05D001014 6.2e-07 59.3 109 31.2
Lsat_1_v5_gn_3_139941 Lactuca sativa HOM05D000324 ORTHO05D001014 6.2e-07 59.3 109 29.4
Medtr5g009350 Medicago truncatula HOM05D000324 ORTHO05D001014 6.2e-07 59.3 108 31.5
Solyc08g008310.3 Solanum lycopersicum HOM05D000324 ORTHO05D001014 6.2e-07 59.3 108 33.3
Sopen08g004170 Solanum pennellii HOM05D000324 ORTHO05D001014 6.2e-07 59.3 108 33.3
SGA_v2.0_scaffold96G28962 Striga asiatica HOM05D000324 ORTHO05D001014 6.2e-07 59.3 50 54.0
TWI81G0354 Tripterygium wilfordii HOM05D000324 ORTHO05D001014 6.2e-07 59.3 109 28.4
Actinidia20233 Actinidia chinensis HOM05D000324 ORTHO05D018220 8.0e-07 58.9 109 29.4
CARHR231230 Cardamine hirsuta HOM05D000324 ORTHO05D001014 8.0e-07 58.9 109 30.3
ECA233G2904 Erigeron canadensis HOM05D000324 ORTHO05D001014 8.0e-07 58.9 110 30.9
Manes.02G010300 Manihot esculenta HOM05D000324 ORTHO05D001014 8.0e-07 58.9 109 29.4
Nitab4.5_0005537g0020 Nicotiana tabacum HOM05D000324 ORTHO05D001014 8.0e-07 58.9 108 31.5
Sp7g21800 Schrenkiella parvula HOM05D000324 ORTHO05D001014 8.0e-07 58.9 109 29.4
TAR374G0836 Trochodendron aralioides HOM05D000324 ORTHO05D001014 8.0e-07 58.9 109 30.3
Cpa.g.sc79.38 Carica papaya HOM05D000324 ORTHO05D001014 1.1e-06 58.5 108 30.6
ECA240G2247 Erigeron canadensis HOM05D000324 ORTHO05D001014 1.1e-06 58.5 110 30.9
Thhalv10029385m.g Eutrema salsugineum HOM05D000324 ORTHO05D001014 1.1e-06 58.5 112 31.2
Oeu054021.2 Olea europaea HOM05D000324 ORTHO05D001014 1.1e-06 58.5 108 31.5
PGR031G0650 Punica granatum HOM05D000324 ORTHO05D001014 1.1e-06 58.5 109 30.3
TAR629G0782 Trochodendron aralioides HOM05D000324 ORTHO05D001014 1.1e-06 58.5 109 30.3
CDE03G0318 Ceratophyllum demersum HOM05D000324 ORTHO05D001014 1.4e-06 58.2 108 32.4
Eucgr.D01734 Eucalyptus grandis HOM05D000324 ORTHO05D001014 1.4e-06 58.2 109 29.4
HanXRQChr07g0190911 Helianthus annuus HOM05D000324 ORTHO05D001014 1.4e-06 58.2 110 30.0
Sp6g06430 Schrenkiella parvula HOM05D000324 ORTHO05D001014 1.4e-06 58.2 112 31.2
Aa31LG2G1410 Aethionema arabicum HOM05D000324 ORTHO05D001014 1.8e-06 57.8 105 33.3
BcaC04g21095 Brassica carinata HOM05D000324 ORTHO05D001014 1.8e-06 57.8 112 30.4
A09p28200 Brassica napus HOM05D000324 ORTHO05D001014 1.8e-06 57.8 112 30.4
C09p35730 Brassica napus HOM05D000324 ORTHO05D001014 1.8e-06 57.8 112 30.4
BolC9t56408H Brassica oleracea HOM05D000324 ORTHO05D001014 1.8e-06 57.8 112 30.4
Dinv37533 Davidia involucrata HOM05D000324 ORTHO05D001014 1.8e-06 57.8 109 31.2
Lj2C168G9 Lonicera japonica HOM05D000324 ORTHO05D001014 1.8e-06 57.8 109 31.2
Sed0000919 Sechium edule HOM05D000324 ORTHO05D001014 1.8e-06 57.8 106 31.1
Actinidia22154 Actinidia chinensis HOM05D000324 ORTHO05D001014 2.3e-06 57.4 109 29.4
Ah.07g197370 Amaranthus hybridus HOM05D000324 ORTHO05D013394 2.3e-06 57.4 107 31.8
Lj1g0003240 Lotus japonicus HOM05D000324 ORTHO05D001014 2.3e-06 57.4 110 30.0
Medtr5g009360 Medicago truncatula HOM05D000324 ORTHO05D001014 2.3e-06 57.4 109 31.2
AL2G10450 Arabidopsis lyrata HOM05D000324 ORTHO05D001014 3.1e-06 57.0 105 33.3
BraA09t38384Z Brassica rapa HOM05D000324 ORTHO05D001014 3.1e-06 57.0 109 30.3
CDE04G2930 Ceratophyllum demersum HOM05D000324 ORTHO05D001014 3.1e-06 57.0 108 31.5
COL.COLO4_10695 Corchorus olitorius HOM05D000324 ORTHO05D001014 3.1e-06 57.0 106 31.1
CsaV3_4G006560 Cucumis sativus L. HOM05D000324 ORTHO05D001014 3.1e-06 57.0 106 31.1
Dinv32579 Davidia involucrata HOM05D000324 ORTHO05D001014 3.1e-06 57.0 109 29.4
Thhalv10023330m.g Eutrema salsugineum HOM05D000324 ORTHO05D001014 3.1e-06 57.0 105 33.3
Glyma.11G017900 Glycine max HOM05D000324 ORTHO05D001014 3.1e-06 57.0 109 30.3
Lj8A208T61 Lonicera japonica HOM05D000324 ORTHO05D001014 3.1e-06 57.0 109 31.2
Nn1g01879 Nelumbo nucifera HOM05D000324 ORTHO05D001014 3.1e-06 57.0 109 29.4
Nitab4.5_0007367g0030 Nicotiana tabacum HOM05D000324 ORTHO05D001014 3.1e-06 57.0 109 31.2
Peaxi162Scf00074g00929 Petunia axillaris HOM05D000324 ORTHO05D001014 3.1e-06 57.0 108 31.5
vmacro13899 Vaccinium macrocarpon HOM05D000324 ORTHO05D001014 3.1e-06 57.0 109 31.2
Ca_24514_v3 Cicer arietinum L. HOM05D000324 ORTHO05D001014 4.0e-06 56.6 109 31.2
RcHm_v2.0_Chr7g0194931 Rosa chinensis HOM05D000324 ORTHO05D001014 5.2e-06 56.2 108 26.9
SEGI_26006 Sequoiadendron giganteum HOM05D000324 ORTHO05D001014 5.2e-06 56.2 109 29.4
THA.LOC104800078 Tarenaya hassleriana HOM05D000324 ORTHO05D001014 5.2e-06 56.2 108 28.7
THA.LOC104815039 Tarenaya hassleriana HOM05D000324 ORTHO05D001014 5.2e-06 56.2 108 28.7
Sp2g00330 Schrenkiella parvula HOM05D000324 ORTHO05D001014 6.8e-06 55.8 105 32.4
Thecc.03G297300 Theobroma cacao HOM05D000324 ORTHO05D001014 6.8e-06 55.8 108 30.6
TPR.G25571 Trifolium pratense HOM05D000324 ORTHO05D001014 6.8e-06 55.8 109 30.3
Ah.05g179670 Amaranthus hybridus HOM05D000324 ORTHO05D001014 8.9e-06 55.5 105 29.5
BcaC04g22620 Brassica carinata HOM05D000324 ORTHO05D001014 8.9e-06 55.5 105 33.3
C09p17270 Brassica napus HOM05D000324 ORTHO05D001014 8.9e-06 55.5 105 33.3
BolC9t54629H Brassica oleracea HOM05D000324 ORTHO05D001014 8.9e-06 55.5 105 33.3
CiPaw.11G121800 Carya illinoinensis HOM05D000324 ORTHO05D001014 8.9e-06 55.5 109 27.5
AUR62019835 Chenopodium quinoa HOM05D000324 ORTHO05D001014 8.9e-06 55.5 114 30.7
FAN04G1574 Fragaria x ananassa HOM05D000324 ORTHO05D001014 8.9e-06 55.5 109 26.6
Sc22g0005010 Simmondsia chinensis HOM05D000324 ORTHO05D001014 8.9e-06 55.5 121 28.9
SGA_v2.0_scaffold23G10127 Striga asiatica HOM05D000234 ORTHO05D012836 8.9e-06 55.5 53 60.4


User provided reference genes

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